Russell L. Barrett, P. M. Peterson, Konstantin Romaschenko
{"title":"A molecular phylogeny of Eragrostis (Poaceae: Chloridoideae: Eragrostideae): making lovegrass monophyletic in Australia","authors":"Russell L. Barrett, P. M. Peterson, Konstantin Romaschenko","doi":"10.1071/SB19034","DOIUrl":"https://doi.org/10.1071/SB19034","url":null,"abstract":"Abstract. We present a phylogeny based on four DNA molecular markers (rps16–trnK spacer, rps16 intron, rpl32–trnL spacer and ITS) concentrating on species of Eragrostis Wolf in Australia. Two Australian radiations are shown within Eragrostis, one being centred in the arid zone and one in the monsoon tropics. The genus is paraphyletic, with species of Cladoraphis Franch., Ectrosia R.Br., Harpachne Hochst. ex A.Rich., Heterachne Benth., Neeragrostis Bush, Planichloa B.K.Simon, Psammagrostis C.A.Gardner & C.E.Hubb. and Stiburus Stapf together forming a well supported clade mixed with Eragrostis species. The molecular results are consistent with recognition of an expanded Eragrostis and we make the following new combinations for Australian taxa: Eragrostis agrostoides (Benth.) R.L.Barrett & P.M.Peterson, E. anomala (C.E.Hubb.) R.L.Barrett & P.M.Peterson, E. appressa (S.T.Blake) R.L.Barrett & P.M.Peterson, E. baileyi (C.E.Hubb.) R.L.Barrett & P.M.Peterson, E. blakei (C.E.Hubb.) R.L.Barrett & P.M.Peterson, E. confusa (C.E.Hubb.) R.L.Barrett & P.M.Peterson, E. danesii (Domin) R.L.Barrett & P.M.Peterson, E. gulliveri (F.Muell.) R.L.Barrett & P.M.Peterson, E. leporina (R.Br.) R.L.Barrett & P.M.Peterson, E. nervilemma (B.K.Simon) R.L.Barrett & P.M.Peterson, E. ovata (Night.) R.L.Barrett & P.M.Peterson, E. scabrida (C.E.Hubb.) R.L.Barrett & P.M.Peterson, E. wiseana (C.A.Gardner & C.E.Hubb.) R.L.Barrett & P.M.Peterson and Sporobolus ramigerus (F.Muell.) P.M.Peterson, Romasch. & R.L.Barrett, and propose the following new names: E. divergens R.L.Barrett & P.M.Peterson, E. lilliputiana R.L.Barrett & P.M.Peterson and E. nightingaleae R.L.Barrett & P.M.Peterson. Lectotypes are designated for Ectrosia agrostoides Benth., E. anomala C.E.Hubb., E. appressa S.T.Blake, E. baileyi C.E.Hubb., E. blakei C.E.Hubb., E. confusa C.E.Hubb., E. gulliveri F.Muell., E laxa S.T.Blake, E. leporina R.Br, E. leporina var. longiglumis C.E.Hubb., E. schultzii Benth., E. schultzii var. annua C.E.Hubb., E. spadicea R.Br., Glyceria australasica Steud., Heterachne gulliveri Benth., Heterachne gulliveri var. major C.E.Hubb. Poa ramigera F.Muell. and Psammagrostis wiseana C.A.Gardner & C.E.Hubb.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB19034","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49320598","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
P. Brownsey, D. Ohlsen, L. Shepherd, Whitney L. M. Bouma, Erin L. May, M. Bayly, L. Perrie
{"title":"A review of the fern genus Pellaea (Pteridaceae) in Australasia","authors":"P. Brownsey, D. Ohlsen, L. Shepherd, Whitney L. M. Bouma, Erin L. May, M. Bayly, L. Perrie","doi":"10.1071/SB20006","DOIUrl":"https://doi.org/10.1071/SB20006","url":null,"abstract":"Abstract. Five indigenous species of Pellaea in Australasia belong to section Platyloma. Their taxonomic history is outlined, morphological, cytological and genetic evidence for their recognition reviewed, and new morphological and chloroplast DNA-sequence data provided. Australian plants of P. falcata (R.Br.) Fée are diploid and have longer, narrower pinnae than do New Zealand plants previously referred to P. falcata, which are tetraploid. Evidence indicates that P. falcata does not occur in New Zealand, and that collections so-named are P. rotundifolia (G.Forst.) Hook. Chloroplast DNA sequences are uninformative in distinguishing Australian P. falcata from New Zealand P. rotundifolia, but show that Australian P. nana is distinct from both. Sequence data also show that Australian and New Zealand populations of P. calidirupium Brownsey & Lovis are closely related, and that Australian P. paradoxa (R.Br.) Hook. is distinct from other Australian species. Although P. falcata is diploid and P. rotundifolia tetraploid, P. calidirupium, P. nana (Hook.) Bostock and P. paradoxa each contain multiple ploidy levels. Diploid populations of Pellaea species are confined to Australia, and only tetraploids are known in New Zealand. Evolution of the group probably involved hybridisation, autoploidy, alloploidy, and possibly apomixis. Further investigation is required to resolve the status of populations from Mount Maroon, Queensland and the Kermadec Islands.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB20006","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42276495","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A re-evaluation of the morphology of Sorapilla (Bryophyta: Sorapillaceae) based on Sorapilla papuana","authors":"D. Meagher, A. Cairns, R. Seppelt, Megan Grixti","doi":"10.1071/SB19050","DOIUrl":"https://doi.org/10.1071/SB19050","url":null,"abstract":"Sorapilla Spruce & Mitt. is a taxonomically problematic genus of mosses. In this paper one of the two known species, Sorapilla papuana Broth. & Geh., is described and illustrated in detail for the first time, and its morphological peculiarities are discussed. It is monoicous, rather than dioicous as had been assumed. The presence of an annulus on the capsule and sparse hairs on the calyptra, both suggested previously, are confirmed. Paraphyllia, which had been reported for Sorapilla, are not present. The phylogenetic position of Sorapilla remains uncertain.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44649486","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Brendan C. Wilde, S. Rutherford, M. M. van der Merwe, M. L. Murray, M. Rossetto
{"title":"First example of hybridisation between two Australian figs (Moraceae)","authors":"Brendan C. Wilde, S. Rutherford, M. M. van der Merwe, M. L. Murray, M. Rossetto","doi":"10.1071/SB19048","DOIUrl":"https://doi.org/10.1071/SB19048","url":null,"abstract":"Abstract. The chance discovery of an unusual Ficus specimen near Katherine in the Northern Territory prompted an investigation into hybridisation between two morphologically distinct endemic Australian sandpaper figs, Ficus aculeata A.Cunn. ex Miq. and F. coronulata Miq. In this study, genome-wide scans and morphological measurements were used to investigate the perceived hybridisation by using herbarium and freshly collected samples. Most of the putative hybrids displayed a wide variety of intermediate morphology and some individuals had characteristics consistent with the description of a third species, F. carpentariensis D.J.Dixon. Both genomic and morphometric results provided evidence of naturally occurring hybridisation events within Ficus. Additionally, the findings from this study showed possible taxonomic issues within the Northern Australian sandpaper figs that warrant further investigation.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB19048","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48499740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
D. Ohlsen, L. Shepherd, L. Perrie, P. Brownsey, M. Bayly
{"title":"Genetic variation and phylogeography of the Australian and New Zealand fern Asplenium flabellifolium (Aspleniaceae)","authors":"D. Ohlsen, L. Shepherd, L. Perrie, P. Brownsey, M. Bayly","doi":"10.1071/SB20001","DOIUrl":"https://doi.org/10.1071/SB20001","url":null,"abstract":"Abstract. Asplenium flabellifolium Cav. is a cytologically variable Australian and New Zealand fern. Here, we sequence chloroplast trnL-trnF and rps4-trnS from samples throughout its range to provide the first phylogeographic investigation of a fern common in both countries. Twenty-three haplotypes were detected, which formed six haplogroups in a network. Australian specimens were placed in all haplogroups. The placement of New Zealand haplotypes in five of the haplogroups suggests that this species has dispersed across the Tasman Sea at least five times. Sexually reproducing plants of lower ploidy, detected only in south-eastern Australia, contained haplotypes from the two haplogroups that are successive sisters to the remaining diversity in the phylogeny. This likely suggests that A. flabellifolium was originally a sexually reproducing species in south-eastern Australia and spread to the rest of its distribution where apomictic plants dominate. More than one haplogroup was detected in several areas across its distribution, suggesting that these areas were colonised several times. Other areas harboured several haplotypes from a single haplogroup or haplogroups not recovered elsewhere, indicating possible long-term persistence in these areas. Haplotypes and morphological features were not found to be exclusive to either breeding system or ploidy and no taxonomic revision is proposed.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB20001","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49220243","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
G. Hallegraeff, R. Eriksen, Claire H. Davies, Anita Slotwinski, F. McEnnulty, F. Coman, Julian Uribe-Palomino, M. Tonks, A. Richardson
{"title":"The marine planktonic dinoflagellate Tripos: 60 years of species-level distributions in Australian waters","authors":"G. Hallegraeff, R. Eriksen, Claire H. Davies, Anita Slotwinski, F. McEnnulty, F. Coman, Julian Uribe-Palomino, M. Tonks, A. Richardson","doi":"10.1071/SB19043","DOIUrl":"https://doi.org/10.1071/SB19043","url":null,"abstract":"Abstract. We reviewed 15 572 Australian species-level records of the marine planktonic dinoflagellate Tripos Bory (formerly Ceratium Schrank, a genus now restricted to freshwater species). The genus is represented by over 50 species and numerous varieties and forms in Australian tropical, subtropical and temperate marine waters and the Southern Ocean. There exists considerable plasticity in the morphology of many species, which has confounded species delimitations and created uncertainty around their spatial distributions. We newly illustrate by light and electron microscopy the rarely reported Tripos hundhausenii (Schröd.) Hallegr. & Huisman comb. nov. first described from the Arabian Sea, but increasingly being observed in Sydney coastal waters. A large number of Tripos species are widely distributed in temperate, subtropical and tropical waters and their distributions have remained remarkably stable in Australian waters over the past 60–80 years. By contrast, we identified a narrow group of warm-water species, including T. belone (Cleve) F.Gómez, T. cephalotus (Lemmerm.) F.Gómez, T. dens (Ostenf. & E.J.Schmidt) F.Gómez, T. digitatus (F.Schütt) F.Gómez, T. gravidus (Gourret) F.Gómez, T. incisus (G.Karst.) F.Gómez, T. paradoxides (Cleve) F.Gómez and T. praelongus (Lemmerm.) F.Gómez, that are commonly encountered off Sydney, rarely found down to Eden and Batemans Bay or Bass Strait, but occasionally occur as far south as King Island and Maria Island, Tasmania. These rare tropical Tripos species are carried southward by the East Australian and Leeuwin Currents and deserve careful attention in monitoring for future range expansions, changes in seasonality or upwelling or incursion of deep tropical waters.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-05-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB19043","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46309883","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Two new species and a new record of Crepidotus (Agaricomycetes) from India","authors":"A. Manoj Kumar, M. C. Aime, K. Vrinda, C. Pradeep","doi":"10.1071/SB19033","DOIUrl":"https://doi.org/10.1071/SB19033","url":null,"abstract":"During ongoing studies of the mycoflora of Kerala State, India, three species of Crepidotus, namely, C. exilis A.M.Kumar & C.K.Pradeep sp. nov., C. globisporus A.M.Kumar & C.K.Pradeep sp. nov. and C. croceotinctus Peck, were discovered. These species are described and illustrated. A phylogenetic reconstruction based on maximum-likelihood analyses of nuclear ribosomal large subunit rDNA sequences are provided.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB19033","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42605503","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The Eriochilus dilatatus (Orchidaceae) complex in Western Australia: subspecies taxonomy is not supported by consistent differences in morphology or distribution","authors":"Mark C. Brundrett, T. Hammer","doi":"10.1071/SB19024","DOIUrl":"https://doi.org/10.1071/SB19024","url":null,"abstract":"A detailed study of taxonomic features of the Eriochilus dilatatus (Orchidaceae) complex (white bunny orchids) in Western Australia found that there were no consistent differences among most subspecies when herbarium specimens or living plants were compared. These subspecies were originally segregated primarily by differences in leaf size and shape and the number of flowers produced, but a critical examination of herbarium specimens found that these features were highly inconsistent within taxa. These features were also found to be highly variable over time and space within populations of living plants. The distribution patterns, habitat preferences and flowering times of these taxa were found to overlap, even for subspecies brevifolius and orientalis, which occupy the northern and eastern limits of the distribution of this species. Eriochilus dilatatus subsp. magnus and subsp. multiflorus were shown to be synonyms of subsp. dilatatus, whereas subsp. undulatus and subsp. orientalis are synonymised under subsp. brevifolius. As a result of this study, the two recognised subspecies are subsp. dilatatus and subsp. brevifolius, which can be readily separated by plant height, flower numbers and leaf morphology, except for a few intermediate plants where ranges overlap. New keys and descriptions to these taxa are provided. The reasons for previous taxonomic confusion in this group and in many other Western Australian orchids are discussed and research approaches to resolve these issues are suggested.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB19024","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48618620","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Identifying evolutionary lineages in the Elaeocarpus obovatus complex: population genetics and morphometric analyses support a new subspecies, Elaeocarpus obovatus subsp. umbratilis, from northern Queensland, Australia","authors":"Y. Baba, M. Rossetto, D. Crayn","doi":"10.1071/SB18054","DOIUrl":"https://doi.org/10.1071/SB18054","url":null,"abstract":"Abstract. With the aim to solve long-standing problems of taxonomic delimitation within the E. obovatus species complex (E. obovatus G.Don, E. arnhemicus F.Muell., E. sp. Mt Bellenden Ker (L.J.Brass 18336) Qld Herbarium and E. coorangooloo J.F.Bailey & C.T.White), diversity and relatedness were assessed using a combined population genetics and morphometric approach among 181 and 102 individuals respectively. Simple sequence-repeat (SSR) markers were analysed with clustering methods, analysis of molecular variance (AMOVA) and STRUCTURE. The morphometric data were analysed using cluster and classification and regression tree (CART) methods. The morphometric and genetic analyses together resolve discrete groups corresponding to E. arnhemicus, E. coorangooloo, E. obovatus and E. sp. Mt Bellenden Ker. Elaeocarpus arnhemicus is clearly distinct from all other entities on most of the morphometric and genetic analyses. By contrast, E. sp. Mt Bellenden Ker and E. obovatus were not clearly separated from each other in many morphometric analyses, but can be distinguished clearly by the strongly curved pedicels in early bud and hairy ovary, and, to a lesser extent, by the frequent occurrence of two racemes per axil and cuneate leaf bases, and on the results of the genetic analyses. Elaeocarpus coorangooloo exhibits considerable genetic admixture with the other entities, but it is morphologically distinct. SSR profiles suggested that E. arnhemicus and E. obovatus may be tetraploid, whereas the other entities are diploid. This study has clarified the taxonomic limits of the currently recognised species E. arnhemicus, E. obovatus and E. coorangooloo and supports recognition of E. sp. Mt Bellenden Ker at subspecies rank, described herein as E. obovatus subsp. umbratilis Y.Baba & Crayn. A key to all taxa and revised accounts of E. arnhemicus, E. obovatus subsp. obovatus and E. coorangooloo are provided.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB18054","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44001373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A revised circumscription for Siphonolejeunea and a new species from New Zealand","authors":"M. Renner, P. De Lange","doi":"10.1071/SB19035","DOIUrl":"https://doi.org/10.1071/SB19035","url":null,"abstract":"Abstract. A molecular phylogeny to test the monophyly of Nephelolejeunea by using previously published nrITS, rbcL and trnL–F sequence data demonstrated that Nephelolejeunea is paraphyletic with respect to Siphonolejeunea. Nephelolejeunea and Siphonolejeunea are, therefore, merged and, as the latter name has priority, new combinations in Siphonolejeunea are made for 10 species. The valid publication of the name Austrolejeunea is re-evaluated and we conclude that both Siphonolejeunea subgenus Austrolejeunea and Siphonolejeunea olgae were validly published in 1963. Siphonolejeunea bidentata is reported as new for New Zealand on the basis of a collection from the Wairarapa, a new species, Siphonolejeunea raharahanehemiae, is described on the basis of recent collections from Te Paki, where it grows on the twigs of Metrosideros bartlettii (Myrtaceae), and we provide a revised key to species of Siphonolejeunea. The significant conflict in signal between nrITS and chloroplast markers associated with the relationships of Cololejeunea angustiflora, which chloroplast sequence data suggest may not be grouped with the rest of Cololejeunea, is another interesting result from the phylogeny. The relationships of Cololejeunea angustiflora and its allies warrant further investigation.","PeriodicalId":55416,"journal":{"name":"Australian Systematic Botany","volume":null,"pages":null},"PeriodicalIF":1.6,"publicationDate":"2020-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1071/SB19035","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47134951","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}