Marine Life Science & Technology最新文献

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Trans-4-hydroxy-L-proline catabolism by Pseudomonadota in the ocean. 海洋中假单胞菌对反式-4-羟基- l -脯氨酸的分解代谢。
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2025-01-10 eCollection Date: 2025-02-01 DOI: 10.1007/s42995-024-00272-8
Yan Wang, Zhen Wang, Wen-Xiao Zhao, Xiao-Jie Yuan, Yang Yu, Peng Wang, Min Wang, Andrew McMinn, Yu-Zhong Zhang, Ming Peng, Hui-Hui Fu, Xiu-Lan Chen
{"title":"<i>Trans</i>-4-hydroxy-L-proline catabolism by <i>Pseudomonadota</i> in the ocean.","authors":"Yan Wang, Zhen Wang, Wen-Xiao Zhao, Xiao-Jie Yuan, Yang Yu, Peng Wang, Min Wang, Andrew McMinn, Yu-Zhong Zhang, Ming Peng, Hui-Hui Fu, Xiu-Lan Chen","doi":"10.1007/s42995-024-00272-8","DOIUrl":"10.1007/s42995-024-00272-8","url":null,"abstract":"<p><p>Free <i>trans</i>-4-hydroxy-L-proline (T4LHyp), a non-proteinogenic amino acid, is mainly released from the degradation of collagen, hydroxyproline-rich glycoproteins, and some peptide antibiotics in nature. Although it has been known that some terrestrial bacteria utilize T4LHyp as carbon and nitrogen source via a T4LHyp gene cluster, which and how marine microorganisms catabolize T4LHyp still remains unclear. Here, five T4LHyp-utilizing marine bacterial strains, <i>Halomonas</i> sp. 5021, <i>Salinicola</i> sp. 4072, <i>Alteromonas</i> sp. 6022, <i>Alteromonas</i> sp. 5112 and <i>Alteromonas</i> sp. 30521, were isolated from hydrothermal vent sediment samples collected from the southwest Indian Ocean. While <i>Halomonas</i> sp. 5021 can utilize T4LHyp as both a nitrogen and carbon source, the other four strains can utilize T4LHyp as only a nitrogen source. Then, the T4LHyp catabolic mechanisms of <i>Halomonas</i> sp. 5021 and <i>Salinicola</i> sp. 4072, as a representative of the four strains, were further investigated by genomic, transcriptional, and biochemical analyses. <i>Halomonas</i> sp. 5021 adopts an intact T4LHyp gene cluster containing four enzymes to catabolize T4LHyp into NH<sub>3</sub> and α-ketoglutarate to provide nitrogen and carbon sources for its growth. Compared to <i>Halomonas</i> sp. 5021, <i>Salinicola</i> sp. 4072 lacks an α-KGSA dehydrogenase gene in the T4LHyp gene cluster and can only catabolize T4LHyp into NH<sub>3</sub> and α-ketoglutarate semialdehyde to provide a nitrogen source for its growth. Bioinformatic investigation showed that the 5021-like and 4072-like T4LHyp gene clusters are predominantly found in bacteria from <i>Pseudomonadota</i>, which are widely distributed in multiple marine habitats. Thus, <i>Pseudomonadota</i> bacteria are likely the dominant group to drive the recycling and mineralization of T4LHyp in the ocean.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s42995-024-00272-8.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 1","pages":"187-202"},"PeriodicalIF":5.8,"publicationDate":"2025-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11871167/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143544442","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Marine Flavobacteriaceae produce zeaxanthin via the mevalonate pathway. 海洋黄杆菌科通过甲羟戊酸途径产生玉米黄质。
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2025-01-07 eCollection Date: 2025-02-01 DOI: 10.1007/s42995-024-00268-4
Yuerong Chen, Jianmin Xie, Min Yang, Runlin Cai, Chao Cai, Yongliang Gan, Jude Juventus Aweya, Guanjing Cai, Hui Wang
{"title":"Marine <i>Flavobacteriaceae</i> produce zeaxanthin via the mevalonate pathway.","authors":"Yuerong Chen, Jianmin Xie, Min Yang, Runlin Cai, Chao Cai, Yongliang Gan, Jude Juventus Aweya, Guanjing Cai, Hui Wang","doi":"10.1007/s42995-024-00268-4","DOIUrl":"10.1007/s42995-024-00268-4","url":null,"abstract":"<p><p>Zeaxanthin, an oxygenated carotenoid derivative with potent antioxidative properties, is produced by many organism taxa. <i>Flavobacteriaceae</i> are widely distributed in marine environments; however, the zeaxanthin biosynthesis property in this family remains incompletely explored. Here, we characterized zeaxanthin production by marine <i>Flavobacteriaceae</i> strains and elucidated underlying molecular mechanisms. Eight <i>Flavobacteriaceae</i> strains were isolated from the phycosphere of various dinoflagellates. Analyses of the zeaxanthin production in these strains revealed yields ranging from 5 to 3289 µg/g of dry cell weight. Genomic and molecular biology analyses revealed the biosynthesized zeaxanthin through the mevalonate (MVA) pathway diverging from the 2-<i>C</i>-methyl-d-erythritol-4-phosphate (MEP) pathway commonly observed in most Gram-negative bacteria. Furthermore, comprehensive genome analyses of 322 culturable marine Flavobacteriale strains indicated that the majority of <i>Flavobacteriaceae</i> members possess the potential to synthesize zeaxanthin using precursors derived from the MVA pathway. These data provide insight into the zeaxanthin biosynthesis property in marine <i>Flavobacteriaceae</i> strains, highlighting their ecological and biotechnological relevance.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s42995-024-00268-4.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 1","pages":"132-143"},"PeriodicalIF":5.8,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11871244/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143544508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Picocyanobacteria in the Chesapeake Bay: isolation, diversity, and adaptation. 切萨皮克湾的花青菌:分离、多样性和适应。
IF 5.3 2区 生物学
Marine Life Science & Technology Pub Date : 2025-01-07 eCollection Date: 2025-08-01 DOI: 10.1007/s42995-024-00271-9
Feng Chen
{"title":"Picocyanobacteria in the Chesapeake Bay: isolation, diversity, and adaptation.","authors":"Feng Chen","doi":"10.1007/s42995-024-00271-9","DOIUrl":"10.1007/s42995-024-00271-9","url":null,"abstract":"<p><p>Tiny unicellular cyanobacteria or picocyanobacteria (0.5-3 µm) are important due to their ecological significance. Chesapeake Bay is a temperate estuary that contains abundant and diverse picocyanobacteria. Studies of Chesapeake Bay picocyanobacteria in the past 20 years led to the finding of new members of subcluster 5.2 <i>Synechococcus</i>. They laid the foundation for revealing the ecophysiology, biogeography, genomics, and molecular evolution of picocyanobacterial in the Chesapeake Bay and other coastal estuaries. The Bay picocyanobacteria are known to better tolerate the changes in temperature, salinity, and heavy metals compared to their coastal and open-ocean counterparts. Many picocyanobacteria isolated from the Bay contain rich toxin-antitoxin (TA) genes, suggesting that the TA system may provide them with a genetic advance to cope with variable estuarine environments. Distinct winter and summer picocyanobacteria are present in the Bay, suggesting a dynamic seasonal shift of the picocyanobacterial community in the temperate estuary. While the Bay contains subcluster 5.2 <i>Synechococcus</i>, it also contains freshwater <i>Synechococcus</i>, <i>Cyanobium,</i> and marine <i>Synechococcus</i> due to river influx and the ocean's tidal influence. Some Chesapeake Bay picocyanobacterial clades were found in the Bering Sea and Chukchi Sea, showing a link between the Bay and polar picocyanobacteria. Genomic sequences of estuarine picocyanobacteria provide new insight into the taxonomy and evolution of freshwater, estuarine, and marine unicellular cyanobacteria. Estuaries connect freshwater and marine ecosystems. This overview attempts to extend what we learned from Chesapeake Bay picocyanobacteria to picocyanobacteria in freshwater and marine waters.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 3","pages":"434-449"},"PeriodicalIF":5.3,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12413379/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145014440","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessing the interaction of oceanic and riverine processes on coastal phytoplankton dynamics in the East China Sea. 评估海洋和河流过程对东海沿岸浮游植物动态的相互作用。
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2025-01-07 eCollection Date: 2025-02-01 DOI: 10.1007/s42995-024-00260-y
Jiawei Gao, Rong Bi, Julian P Sachs, Yaoyao Wang, Yang Ding, Hong Che, Jing Zhang, Peng Yao, Jie Shi, Meixun Zhao
{"title":"Assessing the interaction of oceanic and riverine processes on coastal phytoplankton dynamics in the East China Sea.","authors":"Jiawei Gao, Rong Bi, Julian P Sachs, Yaoyao Wang, Yang Ding, Hong Che, Jing Zhang, Peng Yao, Jie Shi, Meixun Zhao","doi":"10.1007/s42995-024-00260-y","DOIUrl":"10.1007/s42995-024-00260-y","url":null,"abstract":"<p><p>The interaction of riverine inputs and ocean current systems causes complex spatiotemporal variations in phytoplankton dynamics in marginal seas of the northwest Pacific Ocean, yet quantitative assessments of these variations and their causes remain limited. Here we evaluate phytoplankton biomass and community structure changes using lipid biomarkers, accompanying ocean circulation and nutrient variations in surface waters collected in spring and summer of 2017-2018 at 118 sites in the East China Sea off the Zhejiang coast. High biomass of diatoms, inferred from brassicasterol concentrations, shifted from the south in spring to the north in summer, while high dinoflagellate biomass, inferred from dinosterol concentrations, occurred mainly in the Changjiang (Yangtze) River plume and adjacent areas in both seasons. Seasonal variation in phytoplankton distribution was linked to the spatial extents of water masses such as the Changjiang Diluted Water (CDW) and the intrusion of the Kuroshio Subsurface Water (KSSW). A three end-member mixing model was applied to quantify water mass contributions. The results showed that an increase in the KSSW (from 0 to 40%) and a decrease in the CDW (from 100 to 20%) resulted in a significant (20%) increase in diatom proportions and a significant (20%) decrease in dinoflagellate proportions. Dinoflagellate proportions were highest in the CDW-dominated region, while diatoms and total phytoplankton biomass were higher in the CDW-KSSW mixing region and the KSSW-dominated region. This study highlights the dynamic response of the phytoplankton community to water mass changes in marginal seas that can aid coastal ecosystem management.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s42995-024-00260-y.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 1","pages":"157-175"},"PeriodicalIF":5.8,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11871228/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143544448","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigating the psammophilic karyorelictean ciliate families Kentrophoridae and Cryptopharyngidae (Protista, Ciliophora): molecular phylogeny, geographic distributions and a brief revision including descriptions of a new genus, a new species and a new combination. 研究嗜沙核动物纤毛虫科Kentrophoridae和Cryptopharyngidae(原虫目,纤毛虫目):分子系统发育、地理分布和简要修订,包括新属、新种和新组合的描述。
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2024-12-23 eCollection Date: 2025-02-01 DOI: 10.1007/s42995-024-00266-6
Mingzhen Ma, Danxu Tang, Wen Song, Lifang Li, Igor V Dovgal, Khaled A S Al-Rasheid, Hunter N Hines, Ying Yan
{"title":"Investigating the psammophilic karyorelictean ciliate families Kentrophoridae and Cryptopharyngidae (Protista, Ciliophora): molecular phylogeny, geographic distributions and a brief revision including descriptions of a new genus, a new species and a new combination.","authors":"Mingzhen Ma, Danxu Tang, Wen Song, Lifang Li, Igor V Dovgal, Khaled A S Al-Rasheid, Hunter N Hines, Ying Yan","doi":"10.1007/s42995-024-00266-6","DOIUrl":"https://doi.org/10.1007/s42995-024-00266-6","url":null,"abstract":"<p><p>Psammophillic ciliates are an integral part of the foodweb despite being underrepresented in terms of molecular phylogeny and modern taxonomy. To investigate the karyorelictean group, sampling was conducted in interstitial marine habitats in China for ciliates living between the sand grains, resulting in an examination of the families Cryptopharyngidae Jankowski, 1980 and Kentrophoridae Jankowski, 1980. Three species, i.e., <i>Cryptopharynx setigerus</i> Kahl, 1928, <i>Kentrophoros fasciolatus</i> (Sauerbrey, 1928) Foissner, 1995 and <i>K. fistulosus</i> (Fauré-Fremiet, 1950) Foissner, 1995, are clearly recognized as being cosmopolitan, while other species await further recording. Phylogenetic analyses were carried out based on updated data. These revealed that the families Cryptopharyngidae and Kentrophoridae are closely related, and most genera studied are monophyletic, although <i>Cryptopharynx qingdaoensis</i> n. sp. is located within the Kentrophoridae branch. Brief revisions of two genera, namely <i>Cryptopharynx</i> Kahl, 1928 and <i>Kentrophoros</i> Sauerbrey, 1928, are provided including keys to the identification of nine species belonging to the former and 12 species belonging to the latter. One new genus, <i>Parakentrophoros</i> n. gen., and one new species, <i>Cryptopharynx qingdaoensis</i> n. sp., are described and a new combination, <i>Parakentrophoros canalis</i> (Wright, 1982) n. comb., is established. Finally, it appears that the subapical oral apparatus undergoes a gradual degeneration process from Cryptopharyngidae to Kentrophoridae.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 1","pages":"23-49"},"PeriodicalIF":5.8,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11871183/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143544500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Linking multi-gene and morphological data in the subclass Scuticociliatia (Protista, Ciliophora) with establishment of the new family Homalogastridae fam. nov. 裸毛虫亚纲(原生目,纤毛虫亚纲)的多基因和形态学资料与新科Homalogastridae fam的建立。11月。
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2024-12-19 eCollection Date: 2025-02-01 DOI: 10.1007/s42995-024-00264-8
Mingjian Liu, Limin Jiang, Zhe Zhang, Fan Wei, Honggang Ma, Zigui Chen, Khaled A S Al-Rasheid, Hunter N Hines, Chundi Wang
{"title":"Linking multi-gene and morphological data in the subclass Scuticociliatia (Protista, Ciliophora) with establishment of the new family Homalogastridae fam. nov.","authors":"Mingjian Liu, Limin Jiang, Zhe Zhang, Fan Wei, Honggang Ma, Zigui Chen, Khaled A S Al-Rasheid, Hunter N Hines, Chundi Wang","doi":"10.1007/s42995-024-00264-8","DOIUrl":"https://doi.org/10.1007/s42995-024-00264-8","url":null,"abstract":"<p><p>Scuticociliatia is one of the most species-rich subclasses in the phylum Ciliophora. The evolutionary relationships among Scuticociliatia groups have long been very unclear due to the homogeneity of morphology and insufficiency of molecular data. With morphological and multi-gene-based molecular data presented here, the evolutionary phylogeny of several Scuticociliatia taxa that were hitherto especially poorly defined is analyzed and discussed. The results indicate: (1) all scuticociliates cluster into two well supported and one poorly supported group, representing three order-level taxa; (2) with the support of both morphological and molecular data, a new family Homalogastridae fam. nov. is proposed in the order Philasterida; (3) <i>Parauronema</i> is formally transferred to Uronematidae and <i>Potomacus</i> is treated as <i>incertae sedis</i> in the order Philasterida, therefore Parauronematidae is proposed to be a junior synonym of Uronematidae; (4) the genus <i>Madsenia</i> and the species <i>Parauronema longum</i> and <i>Pseudocyclidium longum</i> are treated as <i>incertae sedis</i>, while the genus <i>Protophyra</i> should be maintained in the family Ancistridae. In addition, the putative secondary structure of internal transcribed spacer 2 (ITS2) of representative taxa from the three orders of Scuticociliatia are analyzed, and consensus structures and nucleotide composition in each order are exhibited.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s42995-024-00264-8.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 1","pages":"1-22"},"PeriodicalIF":5.8,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11871206/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143544504","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The contribution of biophysical and biochemical CO2 concentration mechanisms to the carbon fixation of the green macroalga Ulva prolifera. 生物物理和生物化学CO2浓度机制对绿色巨藻增生Ulva固碳的贡献。
IF 5.3 2区 生物学
Marine Life Science & Technology Pub Date : 2024-12-12 eCollection Date: 2025-08-01 DOI: 10.1007/s42995-024-00265-7
Xiaohua Zhang, Guang Gao, Zhengquan Gao, Kunshan Gao, Dongyan Liu
{"title":"The contribution of biophysical and biochemical CO<sub>2</sub> concentration mechanisms to the carbon fixation of the green macroalga <i>Ulva prolifera</i>.","authors":"Xiaohua Zhang, Guang Gao, Zhengquan Gao, Kunshan Gao, Dongyan Liu","doi":"10.1007/s42995-024-00265-7","DOIUrl":"10.1007/s42995-024-00265-7","url":null,"abstract":"<p><p>CO<sub>2</sub> concentration mechanisms (CCMs) are important in maintaining the high efficiency of photosynthesis of marine algae. Aquatic photoautotrophs have two types of CCMs: biophysical CCMs, based on the conversion of inorganic carbon, and biochemical CCMs, based on the formation of C<sub>4</sub> acid intermediates. However, the contribution of biophysical and biochemical CCMs to algal carbon fixation remains unclear. Here, we used ethoxyzolamide (EZ) inhibitors of carbonic anhydrase and 3-mercaptopicolinic acid (MPA) inhibitors for phosphoenolpyruvate carboxykinase to examine the importance of biophysical and biochemical CCMs in photosynthesis of the green macroalga <i>Ulva prolifera</i>. The culture experiments showed that the carbon fixation of the species declined when EZ inhibited the biophysical CCM, while the increase in cyclic electron flow around the photosystem I indicated a more active biochemical CCM, contributing to ~ 50% of total carbon fixation. The biophysical CCM was also reinforced when MPA inhibited the biochemical CCM. In a comparison, the biophysical CCM can compensate for almost 100% of total carbon fixation. The results indicate that biophysical CCMs dominate the process of carbon fixation of <i>U. prolifera</i> while biochemical CCM plays a supporting role. Our results provide evidence of a complementary coordination mechanism between the biophysical and biochemical CCMs that promotes the efficiency of photosynthesis of <i>U. prolifera</i>, an efficient mechanism to boost the alga's bloom.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s42995-024-00265-7.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 3","pages":"537-548"},"PeriodicalIF":5.3,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12413351/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145014456","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction: Otolith biogeochemistry reveals possible impacts of extreme climate events on population connectivity of a highly migratory fish, Japanese Spanish mackerel Scomberomorus niphonius. 修正:耳石生物地球化学揭示了极端气候事件对高度洄游鱼类日本鲅鱼种群连通性的可能影响。
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2024-11-21 eCollection Date: 2025-02-01 DOI: 10.1007/s42995-024-00267-5
Xindong Pan, Yong Chen, Tao Jiang, Jian Yang, Yongjun Tian
{"title":"Correction: Otolith biogeochemistry reveals possible impacts of extreme climate events on population connectivity of a highly migratory fish, Japanese Spanish mackerel <i>Scomberomorus niphonius</i>.","authors":"Xindong Pan, Yong Chen, Tao Jiang, Jian Yang, Yongjun Tian","doi":"10.1007/s42995-024-00267-5","DOIUrl":"https://doi.org/10.1007/s42995-024-00267-5","url":null,"abstract":"<p><p>[This corrects the article DOI: 10.1007/s42995-024-00229-x.].</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"7 1","pages":"203"},"PeriodicalIF":5.8,"publicationDate":"2024-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11871180/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143544485","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Chemical interactions between kelp Macrocystis pyrifera and symbiotic bacteria under elevated CO2 condition. 高CO2条件下海带大囊藻与共生细菌的化学相互作用
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2024-11-14 eCollection Date: 2024-11-01 DOI: 10.1007/s42995-024-00259-5
Xiaowen Zhang, Tianle Xi, Yitao Wang, Xiao Fan, Dong Xu, Pengyan Zhang, Ke Sun, Yan Zhang, Jian Ma, Naihao Ye
{"title":"Chemical interactions between kelp <i>Macrocystis pyrifera</i> and symbiotic bacteria under elevated CO<sub>2</sub> condition.","authors":"Xiaowen Zhang, Tianle Xi, Yitao Wang, Xiao Fan, Dong Xu, Pengyan Zhang, Ke Sun, Yan Zhang, Jian Ma, Naihao Ye","doi":"10.1007/s42995-024-00259-5","DOIUrl":"10.1007/s42995-024-00259-5","url":null,"abstract":"<p><p>Kelps are pivotal to temperate coastal ecosystems, providing essential habitat and nutrients for diverse marine life, and significantly enhancing local biodiversity. The impacts of elevated CO<sub>2</sub> levels on kelps may induce far-reaching effects throughout the marine food web, with potential consequences for biodiversity and ecosystem functions. This study considers the kelp <i>Macrocystis pyrifera</i> and its symbiotic microorganisms as a holistic functional unit (holobiont) to examine their collective response to heightened CO<sub>2</sub> levels. Over a 4 month cultivation from the fertilization of <i>M. pyrifera</i> gametes to the development of juvenile sporophytes, our findings reveal that elevated CO<sub>2</sub> levels influence the structure of the <i>M. pyrifera</i> symbiotic microbiome, alter metabolic profiles, and reshape microbe-metabolite interactions using 16S rRNA amplicon sequencing and liquid chromatography coupled to mass spectrometry analysis. Notably, <i>Dinoroseobacter</i>, <i>Sulfitobacter</i>, <i>Methylotenera</i>, <i>Hyphomonas</i>, Milano-WF1B-44 and <i>Methylophaga</i> were selected as microbiome biomarkers, which showed significant increases in comparative abundance with elevated CO<sub>2</sub> levels. Stress-response molecules including fatty-acid metabolites, oxylipins, and hormone-like compounds such as methyl jasmonate and prostaglandin F2a emerged as critical metabolomic indicators. We propose that elevated CO<sub>2</sub> puts certain stress on the <i>M. pyrifera</i> holobiont, prompting the release of these stress-response molecules. Moreover, these molecules may aid the kelp's adaptation by modulating the microbial community structure, particularly influencing potential pathogenic bacteria, to cope with environmental change. These results will enrich the baseline data related to the chemical interactions between the microbiota and <i>M. pyrifera</i> and provide clues for predicting the resilience of kelps to future climate change.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s42995-024-00259-5.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"6 4","pages":"700-712"},"PeriodicalIF":5.8,"publicationDate":"2024-11-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602886/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142774800","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mapping the potential for global offshore finfish mariculture. 绘制全球近海鱼类海水养殖潜力图。
IF 5.8 2区 生物学
Marine Life Science & Technology Pub Date : 2024-11-06 eCollection Date: 2024-11-01 DOI: 10.1007/s42995-024-00257-7
Shuang-En Yu, Ming-Ling Liao, Shuang-Lin Dong, Yun-Wei Dong
{"title":"Mapping the potential for global offshore finfish mariculture.","authors":"Shuang-En Yu, Ming-Ling Liao, Shuang-Lin Dong, Yun-Wei Dong","doi":"10.1007/s42995-024-00257-7","DOIUrl":"10.1007/s42995-024-00257-7","url":null,"abstract":"<p><p>Understanding the potential areas suitable for offshore mariculture is crucial to global seafood security. Here, we map the potential global offshore mariculture areas for 23 principal commercial finfish using an ensemble model. The model involves the temporal-spatial heterogeneity of environments and constraints of temperature-dependent hypoxia and cold edges of cultured finfish by metabolic index and lower thermal safety margin, respectively. Our results show that currently, there is 9.16 ± 1.22 million km<sup>2</sup> of potentially suitable area for offshore finfish mariculture. Under climate change, the potential suitable area will be reduced to between 86.7% and 91.7% of the current size by 2050. Compared to the decline in tropical regions, the expanded potential areas in temperate and polar regions will become more important for global seafood security. The potential offshore finfish mariculture area responds differently to global change among species, and cold-water finfish may benefit from global warming. Overall, despite changes in the distribution of global offshore mariculture areas and replacements of local potential mariculture species, offshore finfish mariculture still holds immense potential in the future.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s42995-024-00257-7.</p>","PeriodicalId":53218,"journal":{"name":"Marine Life Science & Technology","volume":"6 4","pages":"651-664"},"PeriodicalIF":5.8,"publicationDate":"2024-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602909/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142774132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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