Botanical StudiesPub Date : 2020-03-10DOI: 10.1186/s40529-020-00283-5
Qian Zhao, Xiang-Yun Yang, Yao Li, Fang Liu, Xiang-Yu Cao, Zhen-Hua Jia, Shui-Shan Song
{"title":"N-3-oxo-hexanoyl-homoserine lactone, a bacterial quorum sensing signal, enhances salt tolerance in Arabidopsis and wheat.","authors":"Qian Zhao, Xiang-Yun Yang, Yao Li, Fang Liu, Xiang-Yu Cao, Zhen-Hua Jia, Shui-Shan Song","doi":"10.1186/s40529-020-00283-5","DOIUrl":"https://doi.org/10.1186/s40529-020-00283-5","url":null,"abstract":"<p><strong>Background: </strong>N-acyl-homoserine lactones (AHLs) are the quorum sensing (QS) signal molecules to coordinate the collective behavior in a population in Gram-negative bacteria. Recent evidences demonstrate their roles in plant growth and defense responses.</p><p><strong>Results: </strong>In present study, we show that the treatment of plant roots with N-3-oxo-hexanoyl-homoserine lactone (3OC6-HSL), one molecule of AHLs family, resulted in enhanced salt tolerance in Arabidopsis and wheat. We found that the growth inhibition phenotype including root length, shoot length and fresh weight were significantly improved by 3OC6-HSL under salt stress condition. The physiological and biochemical analysis revealed that the contents of chlorophyll and proline were increased and the contents of MDA and Na<sup>+</sup> and Na<sup>+</sup>/K<sup>+</sup> ratios were decreased after 3OC6-HSL treatment in Arabidopsis and wheat under salt stress condition. Molecular analysis showed that 3OC6-HSL significantly upregulated the expression of salt-responsive genes including ABA-dependent osmotic stress responsive genes COR15a, RD22, ADH and P5CS1, ABA-independent gene ERD1, and ion-homeostasis regulation genes SOS1, SOS2 and SOS3 in Arabidopsis under salt stress condition.</p><p><strong>Conclusions: </strong>These results indicated that 3OC6-HSL enhanced plant salt tolerance and ABA-dependent and ABA-independent signal pathways and SOS signaling might be involved in the induction of salt resistance by 3OC6-HSL in plants. Our data provide a new insight into the plant-microbe inter-communication.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-03-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7064656/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37725344","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Correction to: Anti-glycation, anti-hemolysis, and ORAC activities of demethylcurcumin and tetrahydroxycurcumin in vitro and reductions of oxidative stress in D-galactose-induced BALB/c mice in vivo.","authors":"Yuh-Hwa Liu, Tai-Lin Lee, Chuan-Hsiao Han, Yi-Shan Lee, Wen-Chi Hou","doi":"10.1186/s40529-020-00285-3","DOIUrl":"https://doi.org/10.1186/s40529-020-00285-3","url":null,"abstract":"<p><p>In the publication of this article (Liu et al. 2019), there was an error in the method and ethics declarations sections which were published with incorrect animal experiment approval number. The error: 'These animal experimental protocols have been reviewed and approved by the Institutional Animal Care and Use Committee of Taipei Medical University (LAC-99-0142).' Should instead read: These animal experimental protocols have been reviewed and approved by the Institutional Animal Care and Use Committee of Taipei Medical University (LAC-2016-0340).</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40529-020-00285-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37721803","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2020-03-02DOI: 10.1186/s40529-020-00284-4
Yoshimi Yamamura, Ayaka Mabuchi
{"title":"Functional characterization of NADPH-cytochrome P450 reductase and cinnamic acid 4-hydroxylase encoding genes from Scoparia dulcis L.","authors":"Yoshimi Yamamura, Ayaka Mabuchi","doi":"10.1186/s40529-020-00284-4","DOIUrl":"https://doi.org/10.1186/s40529-020-00284-4","url":null,"abstract":"<p><strong>Background: </strong>Most plant cytochrome P450 (P450) proteins need to be supplied with electrons from a redox partner, e.g. an NADPH-cytochrome P450 reductase (CPR), for the activation of oxygen molecules via heme. CPR is a flavoprotein with an N-terminal transmembrane domain, which transfers electrons from NADPH to the P450 via coenzymes flavin adenine dinucleotide and flavin mononucleotide.</p><p><strong>Results: </strong>In this study, a novel CPR (SdCPR) was isolated from a tropical medicinal plant Scoparia dulcis L. The deduced amino acid of SdCPR showed high homology of > 76% with CPR from higher plants and belonged to the class II CPRs of dicots. Recombinant SdCPR protein reduced cytochrome c, ferricyanide (K<sub>3</sub>Fe(CN)<sub>6</sub>), and dichlorophenolindophenol in an NADPH-dependent manner. To elucidate the P450 monooxygenase activity of SdCPR, we isolated a cinnamic acid 4-hydroxylase (SdC4H, CYP73A111) gene from S. dulcis. Biochemical characterization of SdCPR/SdC4H demonstrated that SdCPR supports the oxidation step of SdC4H. Real-time qPCR results showed that expression levels of SdCPR and SdC4H were inducible by mechanical wounding treatment and phytohormone elicitation (methyl jasmonate, salicylic acid), which were consistent with the results of promotor analyses.</p><p><strong>Conclusions: </strong>Our results showed that the SdCPR and SdC4H are related to defense reactions, including the biosynthesis of secondary metabolites.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40529-020-00284-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37698914","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2020-03-02DOI: 10.1186/s40529-020-0282-x
Iju Chen, Kuang-Ti Li, Cheng-Hwa Tsang
{"title":"Silicified bulliform cells of Poaceae: morphological characteristics that distinguish subfamilies.","authors":"Iju Chen, Kuang-Ti Li, Cheng-Hwa Tsang","doi":"10.1186/s40529-020-0282-x","DOIUrl":"https://doi.org/10.1186/s40529-020-0282-x","url":null,"abstract":"<p><strong>Background: </strong>Grass phytoliths are the most common phytoliths in sediments; recognizing grass phytolith types is important when using phytoliths as a tool to reconstruct paleoenvironments. Grass bulliform cells may be silicified to large size parallelepipedal or cuneiform shaped phytoliths, which were often regarded as of no taxonomic value. However, studies in eastern Asia had identified several forms of grass bulliform phytoliths, including rice bulliform phytolith, a phytolith type frequently used to track the history of rice domestication. Identification with a higher level of taxonomic resolution is possible, yet a systematic investigation on morphology of Poaceae bulliform phytoliths is lacking. We aimed at providing a morphological description of bulliform phytoliths of Poaceae from Taiwan based on morphometric measurements in anatomical aspect. The results are important references for paleo-ecological studies.</p><p><strong>Result: </strong>The morphology of grass bulliform phytoliths is usually consistent within a subfamily; the end profile is relatively rectangular in Panicoideae and Micrairoideae, whereas cuneiform to nearly circular in Oryzoideae, Bambusoideae, Arundinoideae, and Chloridoideae. Bulliform phytoliths were seldom observed in Pooideae. Certain morphotypes are limited to plants growing in specific environments. For example, large, thin, and pointed bulliform phytoliths are associated with wet habitat; Chloridoideae types are mostly from C4 plants occupying open arid places.</p><p><strong>Conclusion: </strong>Grass bulliform phytoliths can be identified at least to the subfamily level, and several forms were distinguished within large subfamilies. Previously un-reported silicified cell types, i.e., arm cells and fusoids, and two special trichome phytolith types associated with bulliform phytoliths, were described. Morphometric methods were great tools for delimiting morphotypes; with refined morphological classification the association between forms and habit/habitats was revealed. The knowledge provides new ways to interpret phytolith assemblage data, and it is especially useful when the sediments are enriched in large blocky phytoliths.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40529-020-0282-x","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37699506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2020-02-12DOI: 10.1186/s40529-019-0280-z
Yuan-Yuan Li, Shun-Xing Guo, Yung-I Lee
{"title":"Ultrastructural changes during the symbiotic seed germination of Gastrodia elata with fungi, with emphasis on the fungal colonization region.","authors":"Yuan-Yuan Li, Shun-Xing Guo, Yung-I Lee","doi":"10.1186/s40529-019-0280-z","DOIUrl":"10.1186/s40529-019-0280-z","url":null,"abstract":"<p><strong>Background: </strong>Gastrodia elata is a fully mycoheterotrophic orchid and has long been used in traditional Chinese medicine. The life cycle of G. elata requires an association with two different fungi-Mycena for seed germination and Armillaria for tuber growth. The association with Armillaria is representative of the phytophagous type of orchid mycorrhiza: the intracellular hyphae are lysed without forming condensed pelotons. However, whether the association with Mycena during seed germination belongs to the same type of orchid mycorrhiza is unknown.</p><p><strong>Results: </strong>Histological and ultrastructural studies revealed several notable features in different developmental stages. First, a thickened cell wall with papillae-like structures appeared during fungal penetration in the suspensor end cell, epidermal cells and cortical cells of germinating embryos. In addition, the formation of two distinctive cell types in the colonized region of a protocorm (i.e., the passage canal cell filled with actively growing fungal hyphae) can be observed in the epidermal cell, and the distinctive digestion cell with a dense cytoplasm appears in the cortex. Finally, within the digestion cell, numerous electron-dense tubules form a radial system and attach to degrading fungal hyphae. The fungal hyphae appear to be digested through endocytosis.</p><p><strong>Conclusions: </strong>The present study provides important structural evidence for the phytophagous type of orchid mycorrhiza in the symbiotic germination of G. elata with Mycena. This case demonstrates a particular nutrient transfer network between G. elata and its litter-decaying fungal partner.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7016048/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37637631","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2020-01-27DOI: 10.1186/s40529-020-0281-y
Swastika Laskar, Utsha Ghoshal, Kakali Sen
{"title":"Vessel elements of two thelypteroid ferns-part I.","authors":"Swastika Laskar, Utsha Ghoshal, Kakali Sen","doi":"10.1186/s40529-020-0281-y","DOIUrl":"10.1186/s40529-020-0281-y","url":null,"abstract":"<p><strong>Background: </strong>Hydraulically efficient xylem was evolved in the vascular plants as an apomorphy of the group. Main xylem components involved in water conduction are tracheid and vessel. Vessels, in which two ends are perforated, constituted major evolutionary innovation within vascular plants, presumably providing more efficient solute conduction. Not all vascular plants have vessels. In pteridophytes vessels are present only in seven genera. The contention lies regarding the presence and distribution of vessel in pteridophytes are the impulsive force of this investigation.</p><p><strong>Methods: </strong>Tracheary elements are isolated following the standard maceration technique, then hand-razor cut longisections are passed through the aqueous alcohol grades and air-dried samples are placed on stub, sputter coated with gold and examined with SEM.</p><p><strong>Results: </strong>Two thelypteroid ferns viz. Ampelopteris prolifera (Retz.) Copel. and Thelypteris interrupta (Willd.) K. Iwats. are having vessel elements in root, rhizome, stipe, rachis, primary vein/costa, root-rhizome and rhizome-petiole junction i.e. through entire vascular connection of the plant body though the vessel network is interrupted and joined with parenchyma at the end in some places. Presence of vessel elements in the costa of pteridophytic taxa is first time reported by this study. Vessel end-walls are obliquely placed (root, rhizome, and stipe) but oblique to horizontal orientation is noticed in the primary vein/costa. End-walls are with simple, intermediate and compound perforation plates observed through SEM imaging as well as with tissue specific stain. Studied taxa are grown either in terrestrial microclimate of two contrasting environments i.e. sun and shade (A. prolifera) or in open swampy land (T. interrupta) with moderate to highly disturbed places as rapid proliferating populations showing interpopulation variations of tracheary elements length-width(s) and vessel end-wall length-width(s).</p><p><strong>Conclusion: </strong>Vessel elements are present throughout the entire vascular connections of the plant body of A. prolifera (Retz.) Copel. and T. interrupta (Willd.) K. Iwats. Interpopulation variation of tracheary elements length-width(s) and vessel end-wall length width(s) are noticed. Till date only seven genera of pteridophytes are reported for the presence of vessel and these two genera are the new addition with the previous.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6985324/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37583946","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2020-01-27DOI: 10.1186/s40529-019-0278-6
Ying Zhang, Yuan-Yuan Li, Xiao-Mei Chen, Shun-Xing Guo, Yung-I Lee
{"title":"Effect of different mycobionts on symbiotic germination and seedling growth of Dendrobium officinale, an important medicinal orchid.","authors":"Ying Zhang, Yuan-Yuan Li, Xiao-Mei Chen, Shun-Xing Guo, Yung-I Lee","doi":"10.1186/s40529-019-0278-6","DOIUrl":"10.1186/s40529-019-0278-6","url":null,"abstract":"<p><strong>Background: </strong>Orchids maintain a symbiotic relationship with mycorrhizal fungi in the lifecycle. Previous reports indicated that diverse mycobionts may have different roles during orchid growth and development. Although various mycorrhizal fungi have been isolated from Dendrobium roots and protocorms, little is known about their specific effects on seed germination and seedling growth. To understand the specific role of isolated fungal strains (i.e., Tulasnella and Sebacina), we used symbiotic culture to compare the effect of 6 fungal strains on seed germination and seedling growth of Dendrobium officinale, an important Chinese medicinal orchid.</p><p><strong>Results: </strong>In symbiotic germination tests, 6 fungal strains (4 Tulasnella strains and 2 Sebacina strains) promoted seed germination with different efficiencies. Seeds inoculated with Tulasnella strains S6 and S7 conferred higher germination percentage and faster protocorm development than other fungal strains. In symbiotic cultures, seedlings inoculated with Sebacina strain S3 had optimal fresh and dry matter yield. Also, Tulasnella strains S6 and S7 promoted seedling growth with good fresh and dry matter yield. Sebacina strain S2 inoculation greatly enhanced root and tiller production and the content of total crude polysaccharides, although seedlings were smaller with less fresh and dry matter yield than other seedlings.</p><p><strong>Conclusions: </strong>Tulasnella and Sebacina strains could promote seed germination and seedling growth of D. officinale with different efficiencies. Our results suggest a non-specific mycorrhizal association and development-dependent preference. Our data provide the basic knowledge for use of different fungal strains in conservation and/or production practices of D. officinale.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6985412/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37586337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2020-01-21DOI: 10.1186/s40529-019-0279-5
Yuan-Kai Tu, Han-Wei Chen, Kuang-Yu Tseng, Yen-Chun Lin, Bo-Jein Kuo
{"title":"Morphological and genetic characteristics of F<sub>1</sub> hybrids introgressed from Brassica napus to B. rapa in Taiwan.","authors":"Yuan-Kai Tu, Han-Wei Chen, Kuang-Yu Tseng, Yen-Chun Lin, Bo-Jein Kuo","doi":"10.1186/s40529-019-0279-5","DOIUrl":"https://doi.org/10.1186/s40529-019-0279-5","url":null,"abstract":"<p><strong>Background: </strong>Unintentional introgression from genetically modified (GM) oilseed rape (Brassica napus) to a relative is inevitable in the open field. A feasible and practical strategy for restricting the spread of GM offspring is to set a reasonable isolated distance between GM B. napus and the relatives. To define the isolated distance, a pollen donor/recipient pair is a prerequisite to conducting the field trial of pollen flow. However, because the cultivation of GM B. napus is prohibited in Taiwan, it is difficult to obtain relevant information. Thus, this study explored the morphological and genetic characteristics of five varieties of B. napus (donor), three varieties of B. rapa (recipient), and the 15 corresponding F<sub>1</sub> hybrids, aiming to construct phenotypic data and genetic variation data and to select the most appropriate pollen donor/recipient for future field trials of pollen flow.</p><p><strong>Results: </strong>The genome size of all F<sub>1</sub> hybrids estimated using flow cytometry showed intermediate DNA content between B. napus and B. rapa varieties. Most of the F<sub>1</sub> hybrids had intermediate plant height and blooming period, and the rosette leaves type and colors resembled those of B. napus varieties. The results of sequence-related amplified polymorphism (SRAP) showed an average of 9.52 bands per primer combination and 67.87 polymorphic bands among the F<sub>1</sub> hybrid population. Similarity and cluster analyses revealed higher similarity between F<sub>1</sub> hybrids and B. napus varieties than between F<sub>1</sub> hybrids and B. rapa varieties. Furthermore, we identified a specific 1100-bp band (LOC106302894) in F<sub>1</sub> hybrids and B. napus varieties but not in B. rapa varieties.</p><p><strong>Conclusions: </strong>The rosette leaves and the DNA marker LOC106302894 observed in F<sub>1</sub> hybrids are consistent phenotypic and genetic characteristics that can be used to identify the presence of unintentional hybridization from B. napus to B. rapa in Taiwan. Due to the prohibition of GM crop cultivation, the hybridization system of non-GM Brassica species in this study can be utilized as a mimic scheme to conduct pollen flow trials, thus facilitating the determination of the proper isolated distance.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2020-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40529-019-0279-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"37565367","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Botanical StudiesPub Date : 2019-02-01DOI: 10.1186/s40529-018-0250-x
Hungyen Chen
{"title":"Bayesian inference of environmental effects on seaweed production in Japan via a production-environmental suitability model.","authors":"Hungyen Chen","doi":"10.1186/s40529-018-0250-x","DOIUrl":"10.1186/s40529-018-0250-x","url":null,"abstract":"<p><strong>Background: </strong>Both natural and human-induced disturbances are commonly responsible for an overall decrease of the world's seaweed. Along Japan's coastal areas, edible seaweed production has been decreasing for decades. In this study, a production-environmental suitability model to estimate the impacts of environmental factors on seaweed production was developed. The developed model not only estimates human-induced disturbances but also quantifies the impacts of environmental factors responsible for the decline of annual seaweed production. The model estimated the temporal variation in human-induced disturbances and the effects of environmental factors (i.e., rainfall, CO<sub>2</sub> concentrations, temperature, typhoons, solar radiation, water nutrient levels, and water quality) on edible seaweeds in Japan from 1985 to 2012.</p><p><strong>Results: </strong>The environmental suitability for seaweed production in Japan was about 4.6 times greater in 1992 than in 2011, meanwhile as a result of human activities, human-induced disturbances of seaweed increased at a rate of 4.9 times faster during the period of 1998-2012 than the period of 1985-1997. The ratio of decreased production to decreased environmental suitability for seaweed production in Japan increased by 15.2% during the study years, which means that seaweed production has become more sensitive to environmental disturbances, including climatic factors and human activities in 1998-2012.</p><p><strong>Conclusions: </strong>The results are novel in demonstrating temporal variations in the level of environmental suitability to seaweed production by using a simple mathematical model. The production-environmental suitability model successfully predicted seaweed production by reflecting the 28-year temporal variation of the observed seaweed production in Japan.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2019-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40529-018-0250-x","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36908075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Effective Agrobacterium-mediated transformation protocols for callus and roots of halophyte ice plant (Mesembryanthemum crystallinum).","authors":"Hau-Hsuan Hwang, Chih-Hao Wang, Hsiao-Huei Chen, Jia-Fang Ho, Shin-Fei Chi, Fan-Chen Huang, Hungchen Emilie Yen","doi":"10.1186/s40529-018-0249-3","DOIUrl":"10.1186/s40529-018-0249-3","url":null,"abstract":"<p><strong>Background: </strong>Ice plant (Mesembryanthemum crystallinum L.) is a model plant for studying salt-tolerant mechanisms in higher plants. Many salt stress-responsive ice plant genes have been identified with molecular and biochemical approaches. However, no further functional characterization of these genes in host plant due to lack of easy and effective transformation protocols.</p><p><strong>Results: </strong>To establish efficient transformation system of ice plants, three types of ice plant materials, hypocotyl-derived callus, aseptically-grown seedlings and pot-grown juvenile plants, were used to develop Agrobacterium-mediated transformation protocols. The highest transient transformation efficiency was with 5-day-old ice plant callus co-incubated with an Agrobacterium tumefaciens at 2.5 × 10<sup>9</sup> cells mL<sup>-1</sup> for 48 h. The 3-day-old ice plant seedlings with root tip removed were successfully infected with A. tumefaciens or A. rhizogenes, and obtained 85% and 33-100% transient transformation rates, respectively. The transient transformation assays in ice plant callus and seedlings demonstrated that the concentrations of Agrobacteria, the durations of co-incubation time, and the plant growth stages were three important factors affecting the transient transformation efficiencies. Additionally, pot-grown juvenile plants were syringe-injected with two A. rhizogenes strains A8196 and NCPPB 1855, to establish transformed roots. After infections, ice plants were grown hydroponically and showed GUS expressions in transformed roots for 8 consecutive weeks.</p><p><strong>Conclusions: </strong>Our Agrobacterium-mediated transformation protocols utilized hypocotyl-derived callus and seedlings as plant materials, which can be easily obtained in large quantity. The average successful transient transformation rates were about 2.4-3.0% with callus and 33.3-100.0% with seedlings. We also developed a rapid and efficient protocol to generate transgenic roots by A. rhizogenes infections without laborious and challenging tissue culture techniques. This protocol to establish composite ice plant system demonstrates excellent improvements in efficiency, efficacy, and ease of use over previous ice plant transformation protocols. These Agrobacterium-mediated transformation protocols can be versatile and efficient tools for exploring gene functions at cellular and organ levels of ice plants.</p>","PeriodicalId":48844,"journal":{"name":"Botanical Studies","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2019-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40529-018-0249-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"36884645","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}