Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry最新文献

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Regional Peculiarities of the Prevalence of Polymorphisms in the Genes Involved in the Regulation of Arterial Pressure in Northern Residents of Magadan Oblast 马加丹州北部居民参与调节动脉压的基因多态性的地区特点
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-19 DOI: 10.1134/S1990750823600279
I. N. Bezmenova
{"title":"Regional Peculiarities of the Prevalence of Polymorphisms in the Genes Involved in the Regulation of Arterial Pressure in Northern Residents of Magadan Oblast","authors":"I. N. Bezmenova","doi":"10.1134/S1990750823600279","DOIUrl":"10.1134/S1990750823600279","url":null,"abstract":"<p>Introduction. The North is a territory affected by a combination of extreme environmental factors that are stressful for all human functional systems. Most researchers come to the conclusion of a hypertensive effect of the climatic and geographical conditions of the North on the human organism. Arterial hypertension is the most common cause of a decrease in the quality of life, disability at a young age, and mortality in northern residents. Therefore, the studies aimed at investigating the epidemiology of the genes that increase the risk of developing arterial hypertension in the territory of the circumpolar zone are especially relevant. Aim<i>.</i> The aim of our study was to study the regional peculiarities of the prevalence of polymorphisms in the genes AGT (rs4762), AGTR1 (rs5186), ADD1 (rs4961), and NOS3 (rs2070744) involved in the regulation of arterial pressure in northern residents of Magadan oblast. Materials and Methods. A cross-sectional, simultaneous study was carried out in the sample of 101 unrelated, almost healthy northern men of Magadan oblast (mainly Europeans) living or born in this territory. The mean age of the subjects was 46.12 ± 1.5 years. Genotyping of polymorphic candidate genes for arterial hypertension was performed using a polymerase chain reaction method. The frequencies of the phenotypes, genes, observed and expected heterozygosity, and genetic distances between different populations were calculated; the matrices of genetic distances were used for a cluster analysis. Results<i>.</i> It was established that the frequencies of the alleles that increase the risk of arterial hypertension were 0.1337 (AGT*T), 0.3564 (NOS3*C), 0.2550 (AGTR1*C), and 0.1832 (ADD1*T). Conclusions<i>.</i> A trend of low frequencies of the candidate genes for arterial hypertension is a regional peculiarity of the genetic profile of the population of northern residents of Magadan oblast. Therefore, when compiling prognostic health cards taking into account an ethno-territorial specificity in the territory of Magadan oblast, it is necessary to take into account not only the genetic risk factors for arterial hypertension, but also the timely lifestyle correction, prescription of preventive measures to prevent the development of arterial hypertension in young age.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 3","pages":"152 - 156"},"PeriodicalIF":0.6,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140169204","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A New Human Uveal Melanoma Cell Line: Melanin Production and Molecular Markers for Targeted Therapy 一种新的人类葡萄膜黑色素瘤细胞系:用于靶向治疗的黑色素生成和分子标记
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-19 DOI: 10.1134/S1990750823600607
M. V. Zhilnikova, D. D. Novak, O. S. Troitskaya, A. A. Nushtaeva, M. M. Biryukov, S. P. Zvereva, M. E. Varlamov, V. V. Koval, O. M. Stanishevskaya, D. V. Chernikh, N. V. Kononova, V. V. Atamanov, O. A. Koval
{"title":"A New Human Uveal Melanoma Cell Line: Melanin Production and Molecular Markers for Targeted Therapy","authors":"M. V. Zhilnikova,&nbsp;D. D. Novak,&nbsp;O. S. Troitskaya,&nbsp;A. A. Nushtaeva,&nbsp;M. M. Biryukov,&nbsp;S. P. Zvereva,&nbsp;M. E. Varlamov,&nbsp;V. V. Koval,&nbsp;O. M. Stanishevskaya,&nbsp;D. V. Chernikh,&nbsp;N. V. Kononova,&nbsp;V. V. Atamanov,&nbsp;O. A. Koval","doi":"10.1134/S1990750823600607","DOIUrl":"10.1134/S1990750823600607","url":null,"abstract":"<p>A new human uveal melanoma (UM) cell line uMel1 was established by mechanical disintegration of a tumor fragment. uMel1 cells had a stellate dendrite-like shape, contained a lot of brown melanin pigment, and had a low mitotic index. Optimization of cultivation conditions led to an increase in the rate of cell proliferation and was accompanied by the loss of brown pigment. Since the melanin precursor is L-dihydroxyphenylalanine (L-DOPA), the authors analyzed the cultivation of uMel1 cells in the presence of L-DOPA. When L-DOPA was used at a concentration of 20 μg/mL, causing a decrease in cell viability by no more than 10%, melanocytes uMel1 synthesized melanin. It can be concluded that cultivation in the presence of L-DOPA provides the phenotype of melanin-containing melanocytes of uMel1 personal culture under conditions of long-term cultivation. Analysis of cell adhesion molecules N-cadherin (N-cad), E-cadherin (E-cad), and Mel-CAM, as well as receptors of the epidermal growth factor (ErbB) family by flow cytometry, showed that uMel1 cells have a phenotype of N-cad<sup>–</sup>/E-cad<sup>–</sup>/Mel-CAM<sup>+</sup>/HER2<sup>low</sup>/HER3<sup>low</sup>, and can be used for the study of targeted drugs to Mel-CAM, HER2 and HER3.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 4","pages":"165 - 171"},"PeriodicalIF":0.6,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140169606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessment of the Effect of Age, Renal Function Status, and M-Cholinoblocker Biperidene Intake on Free Plasma Choline Concentrations 评估年龄、肾功能状态和 M-胆碱阻断剂比哌立定摄入量对血浆游离胆碱浓度的影响
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-19 DOI: 10.1134/S1990750824600043
E. I. Savelieva, M. A. Leninsky, N. V. Goncharov
{"title":"Assessment of the Effect of Age, Renal Function Status, and M-Cholinoblocker Biperidene Intake on Free Plasma Choline Concentrations","authors":"E. I. Savelieva,&nbsp;M. A. Leninsky,&nbsp;N. V. Goncharov","doi":"10.1134/S1990750824600043","DOIUrl":"10.1134/S1990750824600043","url":null,"abstract":"<p>The use of high-performance liquid chromatography in combination with tandem mass spectrometry (HPLC-MS/MS) provides a selective determination of free choline in blood plasma. The instability of the measurement results is due to the residual activity of phospholipases that promote the hydrolysis of phosphatidylcholine ex vivo. The use of EDTA as an anticoagulant and compliance with the cold regime (≤4°C) from blood sampling to the supply of deproteinized and diluted plasma for analysis ensures the accuracy of the analysis (standard deviation not higher than 15%) within the linear range (0.5–10) μg/mL or (5–96) µM. Using a validated method of choline determination in plasma, it was found that the concentration of choline in plasma was (10.0 ± 2.2) μM in a group of people 20–40 years old with no identified diseases (<i>n</i> = 30), while the plasma choline concentration within 90 min rose from the baseline value (8.9 ± 1.3) to the mean value (19.1 ± 4.3) μM and remained at this level during the entire observation period of 72 h in volunteers of the same age and also without identified diseases (<i>n</i> = 50) after a single administration of M-cholinoblocker biperiden at a dose of 2 mg. It has also been confirmed that acute renal failure and advanced age are associated with increased plasma free choline concentrations.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 3","pages":"126 - 135"},"PeriodicalIF":0.6,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140169312","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of Natural Polysaccharides on the Population Density of Klebsiella pneumoniae Isolates In Vitro 天然多糖对肺炎克雷伯氏菌离体菌群密度的影响
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-01 DOI: 10.1134/S1990750823600310
Lilia A. Stepanenko, Elena B. Rakova, Boris G. Sukhov, Tatiana V. Kon’kova, Viktoria V. Bedinskaya, Nadezhda V. Klushina, Vladimir I. Zlobin
{"title":"Effect of Natural Polysaccharides on the Population Density of Klebsiella pneumoniae Isolates In Vitro","authors":"Lilia A. Stepanenko,&nbsp;Elena B. Rakova,&nbsp;Boris G. Sukhov,&nbsp;Tatiana V. Kon’kova,&nbsp;Viktoria V. Bedinskaya,&nbsp;Nadezhda V. Klushina,&nbsp;Vladimir I. Zlobin","doi":"10.1134/S1990750823600310","DOIUrl":"10.1134/S1990750823600310","url":null,"abstract":"<p>The purpose of the work was to study the influence of natural polysaccharides—arabinogalactan, galactomannan, and carrageenan—on the growth of <i>Klebsiella pneumoniae</i> strains. It was found that carrageenan, especially in high concentrations, most effectively stimulated the growth of these microorganisms. A dependence of the effect of galactomannan on the concentration used was discovered: an inhibitory effect was detected in high doses and a stimulating effect in low doses. Arabinogalactan inhibited the growth of <i>Klebsiella pneumoniae</i>, which could be due to phenolic impurities (bioflavonoids), the presence of which is typical of this polysaccharide. Moreover, this polysaccharide at a concentration of 0.1 mg/mL completely blocked the growth of the studied microbial strains, which can be explained by the antibacterial effect of flavonoids.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 2","pages":"67 - 73"},"PeriodicalIF":0.6,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140007642","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Green Synthesis of Silica Nanoparticles/Nanocomposites for Biomedical Applications: A Narraitive Review 用于生物医学应用的二氧化硅纳米颗粒/纳米复合材料的绿色合成:综述
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-01 DOI: 10.1134/S1990750823600085
S. M. Khoshnazar, A. Asadi, R. Holghoomi, A. Abdolmaleki
{"title":"Green Synthesis of Silica Nanoparticles/Nanocomposites for Biomedical Applications: A Narraitive Review","authors":"S. M. Khoshnazar,&nbsp;A. Asadi,&nbsp;R. Holghoomi,&nbsp;A. Abdolmaleki","doi":"10.1134/S1990750823600085","DOIUrl":"10.1134/S1990750823600085","url":null,"abstract":"<p>Nanomedicine showed the unique benefits in clinical outcomes in comparison with traditional and conventional drugs in the treatment of cancer. In the future, nanomedicine therapy seems to pave the way for new treatments in cancer. In this regard, silica nanoparticles are used in various fields of technology, biomedicine and biosensing techniques due to their unique properties such as stability, biocompatibility, high surface area, significant reactivity and functionalizability. Although there are various physical and chemical methods for synthesizing silica nanoparticles, its synthesis by green method has other significant features such as being environmentally friendly, cost-effective, saving time and eliminating toxic compounds and harmful by-products that increase their application in the field of biomedicine. In the method of green synthesis of silica nanoparticles, various sources such as plants, fungi, bacteria, yeast, actinomycetes, etc. are used. In this narraitive review, various biomedical applications of green synthesized silica nanoparticles are discussed along with their examples.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 2","pages":"41 - 49"},"PeriodicalIF":0.6,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140007449","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Production of Bacterial Cellulose by Cocultivation of Komagataeibacter sucrofermentans with Producers of Dextran Leuconostoc mesenteroides and Xanthan Xanthomonas campestris 通过蔗糖科玛加泰氏菌与葡聚糖生产者介壳白僵菌和野油菜黄单胞菌的共培养生产细菌纤维素
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-01 DOI: 10.1134/S1990750823600231
Natalia B. Nazarova, Elena V. Liyaskina, Viktor V. Revin
{"title":"Production of Bacterial Cellulose by Cocultivation of Komagataeibacter sucrofermentans with Producers of Dextran Leuconostoc mesenteroides and Xanthan Xanthomonas campestris","authors":"Natalia B. Nazarova,&nbsp;Elena V. Liyaskina,&nbsp;Viktor V. Revin","doi":"10.1134/S1990750823600231","DOIUrl":"10.1134/S1990750823600231","url":null,"abstract":"&lt;div&gt;&lt;p&gt;Bacterial cellulose (BC) is an extracellular product of bacterial metabolism. BC has the same molecular formula as plant cellulose, but their structures are significantly different. Due to its unique properties (high degree of crystallinity, purity, good water-holding capacity), bacterial cellulose is widely used in many areas of human life. However, despite all the advantages of BC over plant polymers, its production is a relatively expensive process. Thus, one of the ways to increase the polymer yield can be the joint cultivation of a bacterial cellulose producer strain with other polysaccharide producers. From literature data, it is known that there is a positive effect of some water-soluble polysaccharides on the yield of BC. In addition, many biosynthetic genes remain silent and not expressed in vitro, thereby severely limiting the chemical diversity of microbial compounds that can be obtained by fermentation. In contrast, the cocultivation of two or more different microorganisms mimics a real “situation” where microorganisms coexist in complex microbial communities. It has been proven that competition or antagonism that occurs during cocultivation leads to a significant increase in existing compounds and/or to the accumulation of new compounds that are not found in axial cultures of the producer strain. The purpose of this work was to study cocultivation as a way to increase the yield of bacterial cellulose during the cultivation of BC producers with other polysaccharide-forming strains. The strain of &lt;i&gt;Komagataeibacter sucrofermentans&lt;/i&gt; B-11267 was used as a BC producer, &lt;i&gt;Xanthomonas campestris&lt;/i&gt; was used as a xanthan producer, and &lt;i&gt;Leuconostoc mesenteroides&lt;/i&gt; was used as a dextran producer. The cultivation was carried out under dynamic conditions on a medium with molasses. The polysaccharide yield was expressed as the absolute dry weight of the polymers per unit volume of the culture medium. We have studied the morphology of bacterial cellulose using atomic force microscopy (AFM), FTIR spectroscopy. Crystallinity was checked by X-ray diffraction analysis. The interest in bacterial cellulose makes it necessary to synthesize it in large quantities on an industrial scale. The problem of increasing productivity was solved by cocultivating the bacterial cellulose producer &lt;i&gt;Komagataeibacter sucrofermentans&lt;/i&gt; with the dextran producer &lt;i&gt;Leuconostoc mesenteroides&lt;/i&gt; and xanthan producer &lt;i&gt;Xanthomonas campestris&lt;/i&gt;, since the addition of water-soluble polysaccharides is known to increase viscosity of the medium and facilitate the dispersion of bacterial cellulose granules, thereby increasing the number of free cells, which can accelerate sugar consumption and polymer formation. At the first stage of the study, the selection of the most optimal conditions for cocultivation of the BC producer with the producers of xanthan and dextran was carried out, namely, the optimal pH value of the medium. Monoculture of bacteria &lt;i&gt;X.","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 2","pages":"101 - 109"},"PeriodicalIF":0.6,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140011000","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Membrane Penetrating Ability of Opicalcin1 Is Mainly Derived from the Latter Segment in Its Primary Sequence Opicalcin1 的膜穿透能力主要来自其主序列中的后段
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-01 DOI: 10.1134/S1990750823600206
Xiaoyu Hua, Jianmei Chen, Xiao Peng, Jinchi Yao, Jun Li, Zhaoyun Peng, Carmen R. Valdivia, Jishun Yang, Héctor H. Valdiva, Liang Xiao
{"title":"The Membrane Penetrating Ability of Opicalcin1 Is Mainly Derived from the Latter Segment in Its Primary Sequence","authors":"Xiaoyu Hua,&nbsp;Jianmei Chen,&nbsp;Xiao Peng,&nbsp;Jinchi Yao,&nbsp;Jun Li,&nbsp;Zhaoyun Peng,&nbsp;Carmen R. Valdivia,&nbsp;Jishun Yang,&nbsp;Héctor H. Valdiva,&nbsp;Liang Xiao","doi":"10.1134/S1990750823600206","DOIUrl":"10.1134/S1990750823600206","url":null,"abstract":"<p>Background: Calcin is a group of globular peptides with 33−35 AAs that penetrate the cell membrane and specially target RyRs from scorpion venoms, however, which fragment in primary sequence for its transmembrane effect is unclear yet. Methods: eight different fragments of the typical Opicalcin1 (OpiCa1) were synthesized according to the distribution of charged amino acids in primary sequence, followed by the determination of both cell penetration activity and cytotoxic. Results: In all eight OpiCa1 fragments, OpiCa1<sub>17−33</sub>, OpiCa1<sub>1−11</sub>, and OpiCa1<sub>23−33</sub> were predicted to be CPPs by CellPPD, and their predicted scores were much smaller than that of TAT, which is consistent with the proportion of basic amino acids. Further fluorescent microscopic experiments found that three fragments FITC labeled OpiCa1<sub>17−33</sub>, OpiCa1<sub>12−22</sub> and OpiCa1<sub>23−33</sub> displayed similar cell penetrating capacities to that of TAT. In contrast, flow cytometry found that FITC-OpiCa1<sub>17−33</sub> and FITC-OpiCa1<sub>23−33</sub> have even larger intracellular fluorescent intensities than that of TAT, indicating stronger cell penetrating capacity. Other OpiCa1 fragments displayed slightly cell penetrating effect, of which the fluorescent intensities were slightly larger than that of control but significantly lower than that of TAT, FITC-OpiCa1<sub>17−33</sub> and FITC-OpiCa1<sub>23−33</sub>. Moreover, although it is not ruled out the impact on cell viability, overall, all OpiCa1 fragments exhibited no or lower cytotoxicity. Conclusion: The latter half of calcin e.g. OpiCa1 in primary sequence is the main responsible fragment for its membrane penetrating ability, and is also a potential new CPP for further utilization e.g. drug delivery.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 2","pages":"82 - 91"},"PeriodicalIF":0.6,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140007779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
In Silico Exploration of PTP1B Inhibitor from Indole Alkaloids of Rauvolfia serpentina (L.) Benth, a Potent Therapeutic Drug Target for Type 2 Diabetes Mellitus 从 Rauvolfia serpentina (L.) Benth 的吲哚生物碱中提取 PTP1B 抑制剂的硅学探索--一种治疗 2 型糖尿病的有效药物靶标
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-01 DOI: 10.1134/S1990750823600309
Boopala Bhagavan Natarajan, Sathish Kumar Paramashivam, Neelam A. Topno, Kannan Narayanan Dhiraviam
{"title":"In Silico Exploration of PTP1B Inhibitor from Indole Alkaloids of Rauvolfia serpentina (L.) Benth, a Potent Therapeutic Drug Target for Type 2 Diabetes Mellitus","authors":"Boopala Bhagavan Natarajan,&nbsp;Sathish Kumar Paramashivam,&nbsp;Neelam A. Topno,&nbsp;Kannan Narayanan Dhiraviam","doi":"10.1134/S1990750823600309","DOIUrl":"10.1134/S1990750823600309","url":null,"abstract":"<p>Protein tyrosine phosphatase 1B (PTP1B) is implicated as a key negative regulator of the insulin. Plant derived PTP1B inhibitors have emerged as attractive and potent therapeutic agents for the treatment of Type 2 diabetes mellitus (T2DM) and obesity. <i>Rauvolfia serpentina</i> is widely used in Indian Ayurvedic Medical System for the treatment of diabetes. We investigated whether the indole alkaloids of <i>R. serpentina</i> suppress the activity of PTPIB. The structures of 25 indole alkaloids of <i>R. serpentina</i> were obtained from NCBI pubchem and KNApSAcK PRIMe database. The crystal structure of protein PTPIB was retrieved from PDB. The interaction between indole alkaloids and PTP 1B was analyzed using reverse pharmacophore mapping by pharmMapper server. STRING database was applied to find out the association of drug target with other protein. The oral bioavailablity and toxicity profiles were verified by Osiris property explorer, Lazar and admetSAR tools. The prominent metabolic site of indole alkaloides and PTP 1B inhibitor, were predicted using <i>metaprint 2D</i> and autodock tool respectively. Yohimbine exhibited potential binding affinity (Δ<i>G</i> = –5.03 Kcal/mol) against PTP1B. Notably, TYR 46 amino acid residue of PTP 1 B exhibit two π–π stacking interactions with the yohimbine alkaloid in between protein-ligand complex. We proved that the yohimbine is the new lead for design and synthesis of PTP1B inhibitor for the treatment of T2DM.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 2","pages":"50 - 66"},"PeriodicalIF":0.6,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140007446","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of Lipocalin-2 and -10 Levels at Time of Diagnosis in Patients with Acute Pulmonary Embolism 评估急性肺栓塞患者诊断时的脂联素-2 和-10 水平
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-01 DOI: 10.1134/S1990750823600097
Buğra Kerget, Hatice Beyza Özkan, Dursun Erol Afşin, Esra Laloglu, Leyla Sağlam
{"title":"Evaluation of Lipocalin-2 and -10 Levels at Time of Diagnosis in Patients with Acute Pulmonary Embolism","authors":"Buğra Kerget,&nbsp;Hatice Beyza Özkan,&nbsp;Dursun Erol Afşin,&nbsp;Esra Laloglu,&nbsp;Leyla Sağlam","doi":"10.1134/S1990750823600097","DOIUrl":"10.1134/S1990750823600097","url":null,"abstract":"<p>Background: Pulmonary embolism (PE) is an emergent pulmonary vascular pathology with high morbidity and mortality. This study investigated the relationship between serum lipocalin-2 and -10 levels and clinical score for early mortality risk in patients diagnosed with PE in the emergency department. Methods: The study included 100 patients with PE and 25 healthy controls. The patients with PE were classified as high-risk (Group 1; <i>n</i> = 25), high-intermediate-risk (Group 2; <i>n</i> = 25), low-intermediate-risk (Group 3; <i>n</i> = 25), and low-risk patients (Group 4; <i>n</i> = 25). Serum lipocalin 2 and 10 levels at admission were measured by enzyme-linked immunosorbent assay and compared between the five groups. Results: Serum lipocalin-2 concentration was significantly higher in Group 1 when compared with the other groups (<i>p</i> = 0.003, =0.001, &lt;0.001, and &lt;0.001, respectively). Serum lipocalin-10 level was also higher in Group 1 than in the other groups (<i>p</i> &lt; 0.001 for all). In addition, lipocalin-10 level was higher in Group 2 than in Group 3, Group 4, and the control group (<i>p</i> = 0.05, &lt;0.001, and &lt;0.001, respectively). In the receiver operating characteristic (ROC) analysis of the utility of lipocalin-2 and lipocalin-10 in the differentiation of high-risk PE patients, for lipocalin-2, a cut-off value of 677.7 ng/L had 90% sensitivity and 79% specificity, while for lipocalin-10, a cut-off value of 506.4 ng/L had 90% sensitivity and 87% specificity. Conclusion: Clinical risk scoring for early mortality in PE is important for treatment planning. Serum lipocalin-2 and -10 levels may be useful in early diagnosis and treatment planning in PE.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 2","pages":"74 - 81"},"PeriodicalIF":0.6,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140007298","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analyses of Brain Natriuretic Peptide Levels in Patients with Newly Diagnosed Hyperthyroidism without Cardiac Diseases 新诊断甲状腺功能亢进且无心脏病患者的脑钠肽水平分析
IF 0.6
Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry Pub Date : 2024-03-01 DOI: 10.1134/S1990750823600139
Alaa Salman Idan, Mohammed I. Hamzah, Mahmoud Shakir Khudhair
{"title":"Analyses of Brain Natriuretic Peptide Levels in Patients with Newly Diagnosed Hyperthyroidism without Cardiac Diseases","authors":"Alaa Salman Idan,&nbsp;Mohammed I. Hamzah,&nbsp;Mahmoud Shakir Khudhair","doi":"10.1134/S1990750823600139","DOIUrl":"10.1134/S1990750823600139","url":null,"abstract":"<p>Objectives: This study examined blood brain natriuretic peptide (BNP) concentrations in newly diagnosed primary hyperthyroidism (PHT) patients, compared them to healthy controls, and examined their correlation with age, gender, and biochemical variables triiodothyronine (T3), tetraiodothyronine (T4), and thyroid stimulating hormone (TSH). The study also sought out a BNP limit for primary hyperthyroidism. Design and methods: The present study included 45 PHT patients without thyroid medication, heart failure, acute coronary syndrome, hypertension, renal failure, pregnancy, Cushing’s syndrome, liver disease, and obesity. In addition, 90 subjects served as the control group in the study. Patients’ and controls’ blood sera were used to measure the concentrations of T3, T4, and TSH by ELFA and BNP by ELISA. Results: The group with PHT had significantly higher BNP levels than the control group. BNP exhibited a significant positive correlation with T3 levels and with age in the PHT group, and its level was higher in females. BNP demonstrated a perfect area under the curve (AU\tC) where the optimal cutoff value was &gt;32.17, with high sensitivity and specificity. Conclusions: PHT influences BNP levels, potentially reflecting disease presence and severity or thyroid-related complications. BNP levels increase with age, with female patients having higher mean levels. A cutoff value can aid clinicians in diagnosing and managing PHT, guiding evaluation and treatment decisions. Further research is needed to substantiate findings and investigate the underlying mechanisms of BNP’s role in thyroid dysfunction.</p>","PeriodicalId":485,"journal":{"name":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry","volume":"17 2","pages":"92 - 100"},"PeriodicalIF":0.6,"publicationDate":"2024-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140011332","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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