{"title":"An inverse problem for matrix processing: an improved algorithm for restoring the distance matrix for DNA chains","authors":"B. Melnikov, Ye Zhang, D. Chaikovskii","doi":"10.35470/2226-4116-2022-11-4-217-226","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-4-217-226","url":null,"abstract":"We consider one of the cybernetic methods in biology related to the study of DNA chains. Namely, we are considering the problem of reconstructing the distance matrix for DNA chains. Such a matrix is formed on the basis of any of the possible algorithms for determining the distances between DNA chains. The objects of research of these algorithms (for mammals), as a rule, are one of the following 3 variants: the main histocompatibility complex, the mitochondrial DNA, and “the tail” of the Y chromosome.\u0000In the paper we give an improved algorithm for restoring the distance matrix for DNA chains. Compared to our previous publications, the following changes have been made to the algorithm. We abandoned the use of the branches and bounds method, but at the same time significantly improved the greedy auxiliary algorithm used in it. In this paper, we apply only this greedy algorithm to the general solution of the distance matrix reconstruction problem. As a result of the conducted computational experiments carried out on one of the two considered criteria for the quality of the algorithms, significant improvements were obtained compared to the results given in our previous publications. At the same time, the total running time of the algorithm remained almost the same as in the previous version.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42720547","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Vibration field control of a two-rotor vibratory unit in the double synchronization mode","authors":"O. Tomchina","doi":"10.35470/2226-4116-2022-11-4-246-252","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-4-246-252","url":null,"abstract":"In the paper the problem of feedback control of vibrational fields in a vibration unit in the double synchronization mode is studied. The algorithms for control of the vibration fields by means of the control of the phase shift between rotors are proposed. The performance of the closed loop mechatronic systems is examined by simulation for the model of the two-rotor vibration unit SV-2M.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43590965","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Strong convergence on a stochastic controlled Lotka-Volterra 3-species model with L´evy jumps","authors":"C. Romero-Meléndez, D. Castillo-Fernández","doi":"10.35470/2226-4116-2022-11-4-227-233","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-4-227-233","url":null,"abstract":"In this paper we study two properties of the numerical solutions of a controlled stochastic Lotka-Volterra one-predator-two-prey model, namely the boundedness in the mean of the numerical solutions and the strong convergence of these solutions. We also establish and solve, by means of the Stochastic Maximum Principle, the corresponding optimal control problem in a population modeled by a Lotka-Volterra system with two types of stochastic environmental fluctuations: white noise and L´evy jumps. Our study shows, assuming standard linear growth and Lipschitz conditions on the drift and diffusion coefficients, that the boundedness of the numerical solutions and the strong convergence of the scheme are preserved in this stochastic model.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49344106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"The history of cybernetics and artificial intelligence: a view from Saint Petersburg","authors":"Alexander L. Fradkov, A. Shepeljavyi","doi":"10.35470/2226-4116-2022-11-3-253-263","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-3-253-263","url":null,"abstract":"In the article the history of cybernetics and artificial intelligence in the world and, particularly in the USSR is outlined starting from the 1940s-1950s. The rapid development of these areas in the 1960s is described in more detail. Special attention is paid to the results of Leningrad (St. Petersburg) researchers, particularly to the work of Vladimir Yakubovich and his scientific school on machine learning, pattern recognition, adaptive systems, intelligent robots and their importance for the further development of cybernetics and artificial intelligence.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43534180","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Siavash Salemi, Hamed Behzadi-Khormouji, H. Rostami, Ahmad Keshavarz, Yaser Keshavarz, Yahya Tabesh
{"title":"Incremental deep learning training approach for lesion detection and classification in mammograms","authors":"Siavash Salemi, Hamed Behzadi-Khormouji, H. Rostami, Ahmad Keshavarz, Yaser Keshavarz, Yahya Tabesh","doi":"10.35470/2226-4116-2022-11-4-234-245","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-4-234-245","url":null,"abstract":"Recently, Deep Convolutional Neural Networks (DCNNs) have opened their ways into various medical image processing practices such as Computer-Aided Diagnosis (CAD) systems. Despite significant developments in CAD systems based on deep models, designing an efficient model, as well as a training strategy to cope with the shortage of medical images have yet to be addressed. To address current challenges, this paper presents a model including a hybrid DCNN, which takes advantage of various feature maps of different deep models and an incremental training algorithm. Also, a weighting Test Time Augmentation strategy is presented. Besides, the proposed work develops the Mask-RCNN to not only detect mass and calcification in mammography images, but also to classify normal images. Moreover, this work aims to benefit from a radiology specialist to compare with the performance of the proposed method. Illustrating the region of interest to explain how the model makes decisions is the other aim of the study to cover existing challenges among the stateof-the-art research works. The wide range of conducted quantitative and qualitative experiments suggest that the proposed method can classify breast X-ray images of the INbreast dataset to normal, mass, and calcification.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45002511","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Optimization approach to the velocity field determining problem","authors":"E. Kotina, D. Ovsyannikov, M. Elizarova","doi":"10.35470/2226-4116-2022-11-3-131-135","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-3-131-135","url":null,"abstract":"A reconstruction of the velocity field is of current interest for different theoretical and practical problems. In the presented work the optimization method of the velocity field construction for successive images is developed and generalized using the concepts of trajectory beam (an ensemble of trajectories), a distribution density function (brightness), and a quality functional. A new formulation of the problem is proposed with the splitting of the initial image to subsets and taking into account a temporal variation. Analytical expressions of the variation and gradient of the investigated functional are given, allowing one to construct various directed optimization methods. The proposed approach can be used for determining the velocity field within different tasks, particularly, for the problems of diagnostic image processing.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44164868","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"An approach for obtaining estimation of stability of large communication network taking into account its dependent paths","authors":"B. Melnikov, Y. Terentyeva","doi":"10.35470/2226-4116-2022-11-3-145-150","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-3-145-150","url":null,"abstract":"The physical data layer transmits bits over physical communication channels, such as coaxial cable or twisted pair. That is, it is this level that directly transmits data. At this level, the characteristics of electrical signals that transmit discrete information are determined. After that it is necessary to consider the control of the communication network, its various algorithms. When designing a communication network, a prerequisite is to calculate its stability, and in the case of large scale communication networks, this is a big problem. The most common deterministic, as well as fairly fast approximate method, which is often implemented at the present time, is the method by which the stability of the communication direction which is estimated by analyzing independent paths only. The main disadvantage of this method is obtaining an understated estimate of stability due to unaccountable dependent routes of communication directions. And this leads to inefficient use of resources. Our proposed methodology allows to take into not only independent paths, but also dependent ones, which is the basis for obtaining a significantly more correct estimate. It is based on an algorithm for checking the presence of a certain path and, based on it, an algorithm for obtaining an exact assessment of stability. The paper also provides analytical and statistical analysis of the considered algorithms. In particular, a special parameter was introduced that characterizes the probability of a failure event of communication lines, in which the number of failed communication lines lies in a certain specified range; after which a study of the function describing this parameter was carried out.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49267014","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A cybernetic view on international stability under multiple sanctions and counter-sanctions","authors":"A. Fradkov","doi":"10.35470/2226-4116-2022-11-3-165-168","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-3-165-168","url":null,"abstract":"In the paper, a simple discrete dynamical model for the dynamics of two antagonistic parties (opponents) under iterated sanctions and counter-sanctions is proposed. The model is inspired by the Osipov-Lanchester model for combats. Simple stability criteria are derived both for the full information case and for the stochastic uncertainty case. A cybernetic (controlled) version of the model described by bilinear difference equations is proposed. The results provide some important qualitative conclusions that are interpreted in terms of international stability preservation. The risks of global instability caused by a further increase of sanctions intensity are formulated and a possible way of controlling the situation by small actions based on the mutual trust of parties is proposed. The author hopes that the proposed mathematical models can bring humanity closer to understanding and updating the mechanisms of achieving sustainable and safe development even in the face of tough sanctions confrontation.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43604343","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Synchronization Of Two-Rotor Vibration Units Using Neural Network-Based PID Controller","authors":"Hoang Duc Long, N. Dudarenko","doi":"10.35470/2226-4116-2022-11-3-136-144","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-3-136-144","url":null,"abstract":"In the paper, the problem of controlled synchronization of Two-rotor Vibration Units is considered. A new bidirectional control law combined with Neural Network based PID controller is proposed for multisynchronization of rotors. Besides, an algorithm for design of Neural Network based PID Controller of Two rotor Vibration Units is developed. The robustness of the proposed controller under the effect of unknown exogenous disturbances is illustrated.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43598374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Physical hysteresis of the piezoelectric drive in precise image velocity stabilization system built into the Earth observing orbit telescope","authors":"Y. Somov, S. Butyrin, T. Somova","doi":"10.35470/2226-4116-2022-11-3-157-164","DOIUrl":"https://doi.org/10.35470/2226-4116-2022-11-3-157-164","url":null,"abstract":"An image velocity stabilization system built into a space telescope for scanning optoelectronic observation of terrestrial targets with a physical hysteresis of a piezoceramic drive is considered. Elaborated algorithms for discrete filtering, results on analysis of the image motion velocity stabilization as well as technologies for terrestrial and in-flight verification are briefly presented.","PeriodicalId":37674,"journal":{"name":"Cybernetics and Physics","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46696515","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}