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Trends in Plant Science最新文献

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Plant Phenomics-the unrecognized rise of a scientific discipline. 植物表型学——一门未被认识到的科学学科的兴起。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-07 DOI: 10.1016/j.tplants.2026.08.001
Alexander Bucksch, Yong S Chung, Jennifer L Clarke, Stephan Gerth, Philipp von Gillhaussen, Wei Guo, Jana Kholová, Shree Pariyar, Ethan Pickering, Sindhuja Sankaran, Sahameh Shafiee, Sergio Alan Cervantes-Perez, Stijn Dhondt, Zhiguo Han, Kabir Hossain, William LaVoy, Jonathan P Lynch, Sónia Negrão, Tony Pridmore, Hannah Schneider, Stefan Schwartz, Ian Stavness, Shangpeng Sun, Vincent Vadez, Lee West, Rick van de Zedde
{"title":"Plant Phenomics-the unrecognized rise of a scientific discipline.","authors":"Alexander Bucksch, Yong S Chung, Jennifer L Clarke, Stephan Gerth, Philipp von Gillhaussen, Wei Guo, Jana Kholová, Shree Pariyar, Ethan Pickering, Sindhuja Sankaran, Sahameh Shafiee, Sergio Alan Cervantes-Perez, Stijn Dhondt, Zhiguo Han, Kabir Hossain, William LaVoy, Jonathan P Lynch, Sónia Negrão, Tony Pridmore, Hannah Schneider, Stefan Schwartz, Ian Stavness, Shangpeng Sun, Vincent Vadez, Lee West, Rick van de Zedde","doi":"10.1016/j.tplants.2026.08.001","DOIUrl":"https://doi.org/10.1016/j.tplants.2026.08.001","url":null,"abstract":"<p><p>Plant Phenomics studies the phenotypic dynamics that form plant phenotypes by systematically measuring traits using phenotyping methods from the quantum to the ecosystem levels. It has emerged as an interdisciplinary field advancing sensing, computation, and plant biology. However, Plant Phenomics has lacked a unifying framework that integrates its community's core concepts from the formal and life sciences. Central to this framework is the definition of the phenome as a set of phenes that govern phenotypic dynamics across all spatial and temporal scales of biological and ecological organization and in interaction with the environment. This paradigm moves beyond gene-centric views and recognizes the equal importance of all spatial and temporal scales in forming plant phenotypes, advancing Plant Phenomics as a data-driven discipline and its emerging profession, the plant phenomicist.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":21.2,"publicationDate":"2026-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148907013","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ubiquitin signalling redefines nutrient trade-offs in crops. 泛素信号重新定义了作物的营养权衡。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-07 DOI: 10.1016/j.tplants.2026.08.005
Chen Kang, Weifeng Zhang, Bruno Peixoto, R Paul Jarvis
{"title":"Ubiquitin signalling redefines nutrient trade-offs in crops.","authors":"Chen Kang, Weifeng Zhang, Bruno Peixoto, R Paul Jarvis","doi":"10.1016/j.tplants.2026.08.005","DOIUrl":"https://doi.org/10.1016/j.tplants.2026.08.005","url":null,"abstract":"<p><p>Changing nutrient availability is associated with growth trade-offs in crops. Recent studies in rice and maize reveal that such constraints can be uncoupled by modifying ubiquitin-dependent proteostatic systems that integrate nutrient and stress signalling pathways. This challenges the inevitability of trade-offs and highlights new strategies for breeding nutrient-efficient, stress-resilient crops.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":21.2,"publicationDate":"2026-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148907093","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Emerging regulatory roles of small metabolites in plant development and adaptation. 小代谢物在植物发育和适应中的新调控作用。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-05 DOI: 10.1016/j.tplants.2026.08.006
Xuan Xia, Alisdair R Fernie, Tao Zhang
{"title":"Emerging regulatory roles of small metabolites in plant development and adaptation.","authors":"Xuan Xia, Alisdair R Fernie, Tao Zhang","doi":"10.1016/j.tplants.2026.08.006","DOIUrl":"https://doi.org/10.1016/j.tplants.2026.08.006","url":null,"abstract":"<p><p>Once viewed mainly as metabolic intermediates, small metabolites are increasingly recognized as spatially and temporally regulated signals that coordinate plant development and adaptation. Understanding these metabolite-based regulatory processes could reveal new strategies to improve crop resilience, productivity, and sustainability under changing environmental conditions.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":21.2,"publicationDate":"2026-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148897836","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Decoupling developmental and physiological adaptations: a strategy to unleash nutrient use efficiency in plants? 解耦发育和生理适应：释放植物养分利用效率的策略？
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-04 DOI: 10.1016/j.tplants.2026.08.003
Cannelle Armengaud, Virginia Protto, Arthur Poitout, Gabriel Krouk, Sandrine Ruffel
{"title":"Decoupling developmental and physiological adaptations: a strategy to unleash nutrient use efficiency in plants?","authors":"Cannelle Armengaud, Virginia Protto, Arthur Poitout, Gabriel Krouk, Sandrine Ruffel","doi":"10.1016/j.tplants.2026.08.003","DOIUrl":"https://doi.org/10.1016/j.tplants.2026.08.003","url":null,"abstract":"<p><p>Plants respond to spatially and temporally variable soil nutrients through root architectural plasticity, regulation of uptake and assimilation per root unit, and plant-soil-microbiome interactions. Although often viewed as complementary, these responses can also behave as compensatory strategies. Under non-optimal nutrient distributions, plants may invest either in greater root proliferation or in higher uptake capacity per root unit. We propose that this development-transport relationship should be understood as an optimization problem, rather than an additive response. Comparable morphology-physiology trade-offs occur in other resource-acquiring organs, including the gut and the lungs. Tuning or partially uncoupling these constraints could redefine crop ideotypes as dynamic combinations of root architecture, physiological elasticity, and controlled rhizosphere outsourcing, opening new routes to improve nutritional efficiencies.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":21.2,"publicationDate":"2026-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148892443","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Decoding dialog: the auxin-calcium signaling crosstalk in plants. 解码对话：植物生长素-钙信号串扰。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-03 DOI: 10.1016/j.tplants.2026.08.002
Milan Župunski, Guido Grossmann, Jiři Friml
{"title":"Decoding dialog: the auxin-calcium signaling crosstalk in plants.","authors":"Milan Župunski, Guido Grossmann, Jiři Friml","doi":"10.1016/j.tplants.2026.08.002","DOIUrl":"https://doi.org/10.1016/j.tplants.2026.08.002","url":null,"abstract":"<p><p>Auxin and calcium (Ca<sup>2+</sup>) are central plant signals that coordinate growth, development, and responses to environmental cues. Typically studied as largely parallel pathways, they are now increasingly recognized as interconnected networks whose activities converge at multiple regulatory levels. Recent advances in live imaging, biosensors, optogenetics, and structural approaches have revealed that auxin can rapidly trigger Ca<sup>2+</sup> influx from the apoplast via TRANSPORT INHIBITOR RESPONSE1 (TIR1)/AUXIN-SIGNALING F-BOX (AFB)-dependent signaling mechanisms and Ca<sup>2+</sup> channels, presumably involving cyclic nucleotides produced by TIR1/AFB auxin receptors. Conversely, Ca<sup>2+</sup> signals arising from mechanosensing, wounding, and environmental stress can modulate auxin transport, signaling, and transcriptional outputs. Together, these discoveries highlight a dynamic, reciprocal signaling axis where Ca<sup>2+</sup> acts both downstream and upstream of auxin to shape growth, development, tropisms, and regeneration.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":21.2,"publicationDate":"2026-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148888406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Painting new pathways: Castilleja enters the genomic era. 绘制新的路径：Castilleja进入基因组时代。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-03 DOI: 10.1016/j.tplants.2026.08.004
Marco Bürger, Gabriela Trejo-Tapia
{"title":"Painting new pathways: Castilleja enters the genomic era.","authors":"Marco Bürger, Gabriela Trejo-Tapia","doi":"10.1016/j.tplants.2026.08.004","DOIUrl":"https://doi.org/10.1016/j.tplants.2026.08.004","url":null,"abstract":"<p><p>Castilleja (Orobanchaceae), commonly known as Indian paintbrush, is a genus of approximately 200 hemiparasitic species found primarily across the Americas. Long studied for its taxonomic complexity, vibrant floral displays, and ecological interactions with host plants, Castilleja has recently emerged as a versatile research system spanning parasitic biology, specialized metabolism, conservation genetics, and pharmacology. The availability of whole-genome sequencing is transforming the field, revealing expanded gene families involved in host recognition, enabling genomic species delimitation of cryptic taxa, and providing frameworks for mapping biosynthetic pathways of bioactive compounds, including iridoid glycosides and phenylethanoid glycosides. This review synthesizes advances across these disciplines and highlights how genomics serves as an integrative force connecting taxonomy, ecology, phytochemistry, and parasitic biology in this genus.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":21.2,"publicationDate":"2026-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148888385","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
What counts in plant science? 在植物科学中什么最重要？
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-01 Epub Date: 2026-07-14 DOI: 10.1016/j.tplants.2026.06.015
Tsubasa Shoji
{"title":"What counts in plant science?","authors":"Tsubasa Shoji","doi":"10.1016/j.tplants.2026.06.015","DOIUrl":"10.1016/j.tplants.2026.06.015","url":null,"abstract":"<p><p>Plant science relies on collaborative, infrastructure-rich, and long-term research, yet evaluation remains dominated by simplified citation-based metrics. This mismatch shapes research culture and incentives. More responsible assessment should combine quantitative indicators with contribution-aware, context-sensitive approaches that better reflect how plant science is conducted.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":"1129-1131"},"PeriodicalIF":21.2,"publicationDate":"2026-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"148449622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cell surface receptors integrate plant immunity, stress adaptation, and nutrient acquisition. 细胞表面受体整合植物免疫、逆境适应和营养获取。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-01 Epub Date: 2026-05-08 DOI: 10.1016/j.tplants.2026.04.013
Yingpeng Xie, Libo Shan, Ping He
{"title":"Cell surface receptors integrate plant immunity, stress adaptation, and nutrient acquisition.","authors":"Yingpeng Xie, Libo Shan, Ping He","doi":"10.1016/j.tplants.2026.04.013","DOIUrl":"10.1016/j.tplants.2026.04.013","url":null,"abstract":"<p><p>Plants thrive in complex and often hostile environments by continuously sensing and responding to a wide array of biotic and abiotic challenges. Central to this surveillance system are cell surface receptors, including receptor kinases and receptor proteins. Recent advances have revealed how these receptors not only recognize pathogen- and damage-associated molecular patterns but also perceive endogenous peptides and environmental signals. Importantly, emerging evidence highlights extensive crosstalk between immune and abiotic stress signaling, with shared components and co-regulatory mechanisms shaping an integrated response. In this review, we synthesize recent discoveries on the diverse roles of cell surface receptors in detecting external and internal signals, coordinating defense and stress tolerance, and balancing these processes with nutrient acquisition.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":"1187-1204"},"PeriodicalIF":21.2,"publicationDate":"2026-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147864457","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pest behavioural disruption by plant metabolites: a crop protection challenge. 植物代谢物对害虫行为的破坏：对作物保护的挑战。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-01 Epub Date: 2026-04-06 DOI: 10.1016/j.tplants.2026.03.005
Roman Pavela, Filippo Maggi, Eleonora Spinozzi
{"title":"Pest behavioural disruption by plant metabolites: a crop protection challenge.","authors":"Roman Pavela, Filippo Maggi, Eleonora Spinozzi","doi":"10.1016/j.tplants.2026.03.005","DOIUrl":"10.1016/j.tplants.2026.03.005","url":null,"abstract":"<p><p>Plant secondary (specialized) metabolites play a pivotal role in disrupting pest behaviour, offering a promising and environmentally friendly alternative to conventional pesticides. These compounds can interfere with insect feeding, oviposition, and host selection, thereby reducing crop damage and pest populations. Recent advances highlight the ecological selectivity and rapid biodegradation of these metabolites, making them attractive for sustainable crop protection. Innovative formulation techniques are enhancing their persistence and efficacy, yet challenges remain in understanding synergistic effects, nontarget impacts, and practical implementation. Harnessing the full potential of plant metabolites for pest behavioural disruption requires integrated research and development, paving the way for their broader adoption in integrated pest management strategies.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":"1219-1230"},"PeriodicalIF":21.2,"publicationDate":"2026-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147628667","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Deflecting the parasitic paradigm: new insights into mutualistic transposons in plant genomes. 偏转寄生范式：植物基因组中互惠转座子的新见解。
IF 21.2 1区 生物学
Trends in Plant Science Pub Date : 2026-09-01 Epub Date: 2026-04-14 DOI: 10.1016/j.tplants.2026.03.010
Yingying Gao, Joost van den Heuvel, Xingtan Zhang, Joost J B Keurentjes
{"title":"Deflecting the parasitic paradigm: new insights into mutualistic transposons in plant genomes.","authors":"Yingying Gao, Joost van den Heuvel, Xingtan Zhang, Joost J B Keurentjes","doi":"10.1016/j.tplants.2026.03.010","DOIUrl":"10.1016/j.tplants.2026.03.010","url":null,"abstract":"<p><p>Inherited transposable elements (TEs) embedded in genomes have an incomparable potential for large-effect mutagenesis. Notwithstanding that transposable elements can be destructive when mobile, it is undeniable that some beneficial effects arise as well. From a population-level perspective, de novo genetic variation arising from TE transposition endows species with increased potential to colonize and thrive in extremely diverse environments. With an emphasis on plant genomes, this review provides an overview of recent insights into functional transpositions and the mechanisms behind them. We will discuss the underappreciated application prospects of mobile elements as prominent endogenous mutagens through recent evidence of transposition-induced phenotypic variation. These novel findings suggest a shift away from the view of TEs as solely parasitic entities and advocate for a more mutualistic role.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":"1205-1218"},"PeriodicalIF":21.2,"publicationDate":"2026-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147692420","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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