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Trends in Plant Science最新文献

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Ecological effects of micro/nanoplastics on plant-associated food webs. 微/纳米塑料对植物相关食物网的生态效应。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-27 DOI: 10.1016/j.tplants.2024.11.018
Muhammad Ilyas, Carlos M Duarte, Elvis Genbo Xu, Guorui Xu, Jie Yang
{"title":"Ecological effects of micro/nanoplastics on plant-associated food webs.","authors":"Muhammad Ilyas, Carlos M Duarte, Elvis Genbo Xu, Guorui Xu, Jie Yang","doi":"10.1016/j.tplants.2024.11.018","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.018","url":null,"abstract":"<p><p>Micro/nanoplastics (MNPs) contamination is a potential threat to global biodiversity and ecosystem functions, with unclear ecological impacts on aboveground (AG) and belowground (BG) food webs in terrestrial ecosystems. Here, we discuss the uptake, ingestion, bioaccumulation, and ecotoxicological effects of MNPs in plants and associated AG-BG biota at various trophic levels. We propose key pathways for MNPs transfer between the AG-BG food webs and elaborate their impact on terrestrial ecosystem multifunctionality. We conclude that MNPs are bioaccumulated in most studied plants and associated AG-BG biota and can be transferred along AG-BG food webs, which may profoundly impact ecosystem functioning. However, most pathways are still untested. Future research on MNPs should focus on the interactions within AG-BG food webs in terrestrial ecosystems.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142898454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Epitranscriptomic regulation through phase separation in plants. 植物中通过相分离的表观转录组调控。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-19 DOI: 10.1016/j.tplants.2024.11.012
Lisha Shen
{"title":"Epitranscriptomic regulation through phase separation in plants.","authors":"Lisha Shen","doi":"10.1016/j.tplants.2024.11.012","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.012","url":null,"abstract":"<p><p>Epitranscriptomic regulation has emerged as a crucial layer of gene control where RNA modifications, particularly N<sup>6</sup>-methyladenosine (m<sup>6</sup>A), introduce complexity and versatility to gene regulation. Increasing evidence suggests that epitranscriptomic regulation through phase separation plays critical roles in mediating RNA metabolism during plant development and stress responses. m<sup>6</sup>A-associated biomolecular condensates formed via phase separation act as dynamic cellular hotspots where m<sup>6</sup>A effectors, RNAs, and other regulatory proteins coalesce to facilitate RNA regulation. Moreover, m<sup>6</sup>A modulates condensate assembly. Herein, I summarize the current understanding of how m<sup>6</sup>A- and m<sup>6</sup>A effector-mediated formation of biomolecular condensates mediates plant development and stress adaptation. I also discuss several working models for m<sup>6</sup>A-associated biomolecular condensates and highlight the prospects for future research on epitranscriptomic regulation through phase separation.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142872844","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
After silencing suppression: miRNA targets strike back: (Trends in Plant Science, 29, 1266-1276; 2024). 沉默抑制后：miRNA 目标反击：（《植物科学趋势》，29，1266-1276；2024）。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-18 DOI: 10.1016/j.tplants.2024.11.016
Alessandro Silvestri, Chandni Bansal, Ignacio Rubio-Somoza
{"title":"After silencing suppression: miRNA targets strike back: (Trends in Plant Science, 29, 1266-1276; 2024).","authors":"Alessandro Silvestri, Chandni Bansal, Ignacio Rubio-Somoza","doi":"10.1016/j.tplants.2024.11.016","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.016","url":null,"abstract":"","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142865253","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pathogen-responsive alternative splicing in plant immunity. 植物免疫中病原应答的选择性剪接。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-18 DOI: 10.1016/j.tplants.2024.11.010
Diogo P Godinho, Romana J R Yanez, Paula Duque
{"title":"Pathogen-responsive alternative splicing in plant immunity.","authors":"Diogo P Godinho, Romana J R Yanez, Paula Duque","doi":"10.1016/j.tplants.2024.11.010","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.010","url":null,"abstract":"<p><p>Plant immunity involves a complex and finely tuned response to a wide variety of pathogens. Alternative splicing, a post-transcriptional mechanism that generates multiple transcripts from a single gene, enhances both the versatility and effectiveness of the plant immune system. Pathogen infection induces alternative splicing in numerous plant genes involved in the two primary layers of pathogen recognition: pattern-triggered immunity (PTI) and effector-triggered immunity (ETI). However, the mechanisms underlying pathogen-responsive alternative splicing are just beginning to be understood. In this article, we review recent findings demonstrating that the interaction between pathogen elicitors and plant receptors modulates the phosphorylation status of splicing factors, altering their function, and that pathogen effectors target components of the host spliceosome, controlling the splicing of plant immunity-related genes.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142865270","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TANDEM ZINC-FINGER/PLUS3: a multifaceted integrator of light signaling. 串联锌-手指/PLUS3：一个多方面的光信号集成商。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-18 DOI: 10.1016/j.tplants.2024.11.014
Ziyi Feng, Anna Zioutopoulou, Tianyuan Xu, Jigang Li, Eirini Kaiserli
{"title":"TANDEM ZINC-FINGER/PLUS3: a multifaceted integrator of light signaling.","authors":"Ziyi Feng, Anna Zioutopoulou, Tianyuan Xu, Jigang Li, Eirini Kaiserli","doi":"10.1016/j.tplants.2024.11.014","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.014","url":null,"abstract":"<p><p>TANDEM ZINC-FINGER/PLUS3 (TZP) is a nuclear-localized protein with multifaceted roles in modulating plant growth and development under diverse light conditions. The unique combination of two intrinsically disordered regions (IDRs), two zinc-fingers (ZFs), and a PLUS3 domain provide a platform for interactions with the photoreceptors phytochrome A (phyA) and phyB, light signaling components, and nucleic acids. TZP controls flowering and hypocotyl elongation by regulating gene expression and protein abundance in a blue, red, or far-red light-specific context. Recently, TZP was shown to undergo liquid-liquid phase separation through its IDRs, thus promoting phyA phosphorylation. Collectively, TZP is an emerging regulator of diverse light signaling pathways; therefore, understanding its biochemical function in integrating environmental signaling networks is key for optimizing plant adaptation.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142865279","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Spotlight on cytochrome b561 and DOMON domain proteins. 聚焦细胞色素 b561 和 DOMON 结构域蛋白。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-13 DOI: 10.1016/j.tplants.2024.11.007
Joaquín Clúa, Aime Jaskolowski, Luciano A Abriata, Yves Poirier
{"title":"Spotlight on cytochrome b561 and DOMON domain proteins.","authors":"Joaquín Clúa, Aime Jaskolowski, Luciano A Abriata, Yves Poirier","doi":"10.1016/j.tplants.2024.11.007","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.007","url":null,"abstract":"<p><p>Biotic and abiotic stresses constrain plant growth worldwide. Therefore, understanding the molecular mechanisms contributing to plant resilience is key to achieving food security. In recent years, proteins containing dopamine β-monooxygenase N-terminal (DOMON) and/or cytochrome b561 domains have been identified as important regulators of plant responses to multiple stress factors. Recent findings show that these proteins control the redox states of different cellular compartments to modulate plant development, stress responses, and iron homeostasis. In this review, we analyze the distribution and structure of proteins with DOMON and/or cytochrome b561 domains in model plants. We also discuss their biological roles and the molecular mechanisms by which this poorly characterized group of proteins exert their functions.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142824434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unlocking microbial reservoirs for antimicrobial peptides and beyond. 解锁微生物储存库的抗菌肽和超越。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-06 DOI: 10.1016/j.tplants.2024.11.013
Akanksha Singh, Shivam Chauhan, Prabodh Kumar Trivedi
{"title":"Unlocking microbial reservoirs for antimicrobial peptides and beyond.","authors":"Akanksha Singh, Shivam Chauhan, Prabodh Kumar Trivedi","doi":"10.1016/j.tplants.2024.11.013","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.013","url":null,"abstract":"<p><p>Recently, Santos-Júnior et al. utilized a machine learning approach to identify nearly a million novel antimicrobial peptides (AMPs) from the global microbiome. Here we explore the untapped potential of plant- and soil-associated microbiomes as a source of novel peptides, highlighting their promising applications in advancing agricultural innovation and sustainability.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142792527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Microbial crosstalk: decoding interactions to generate efficient SynComs. 微生物串扰：解码相互作用以产生有效的syncom。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-02 DOI: 10.1016/j.tplants.2024.11.006
Shilpi Sharma, Ademir S F Araujo
{"title":"Microbial crosstalk: decoding interactions to generate efficient SynComs.","authors":"Shilpi Sharma, Ademir S F Araujo","doi":"10.1016/j.tplants.2024.11.006","DOIUrl":"https://doi.org/10.1016/j.tplants.2024.11.006","url":null,"abstract":"<p><p>Limited studies have explored the complex and intense crosstalk between microbes within synthetic microbial communities (SynComs). Here, we highlight recent findings by Zohair et al., who unraveled the metabolic interactions between co-cultured microbes. We provide insights and perspectives for harnessing these interactions to design efficient SynComs for sustainable agriculture.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":""},"PeriodicalIF":17.3,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142772687","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rice rhizobiome engineering for climate change mitigation. 缓解气候变化的水稻根瘤生物工程学。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-01 Epub Date: 2024-07-16 DOI: 10.1016/j.tplants.2024.06.006
Youngho Kwon, Yunkai Jin, Jong-Hee Lee, Chuanxin Sun, Choong-Min Ryu
{"title":"Rice rhizobiome engineering for climate change mitigation.","authors":"Youngho Kwon, Yunkai Jin, Jong-Hee Lee, Chuanxin Sun, Choong-Min Ryu","doi":"10.1016/j.tplants.2024.06.006","DOIUrl":"10.1016/j.tplants.2024.06.006","url":null,"abstract":"<p><p>The year 2023 was the warmest year since 1850. Greenhouse gases, including CO<sub>2</sub> and methane, played a significant role in increasing global warming. Among these gases, methane has a 25-fold greater impact on global warming than CO<sub>2</sub>. Methane is emitted during rice cultivation by a group of rice rhizosphere microbes, termed methanogens, in low oxygen (hypoxic) conditions. To reduce methane emissions, it is crucial to decrease the methane production capacity of methanogens through water and fertilizer management, breeding of new rice cultivars, regulating root exudation, and manipulating rhizosphere microbiota. In this opinion article we review the recent developments in hypoxia ecology and methane emission mitigation and propose potential solutions based on the manipulation of microbiota and methanogens for the mitigation of methane emissions.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":"1299-1309"},"PeriodicalIF":17.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141634630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Beyond plant genetics: microbiome-enhancing heterosis in plants. 超越植物遗传学：微生物组增强植物的异质性。
IF 17.3 1区 生物学
Trends in Plant Science Pub Date : 2024-12-01 Epub Date: 2024-08-06 DOI: 10.1016/j.tplants.2024.07.015
Ademir S F Araujo, Shilpi Sharma, José Baldin Pinheiro, Angela Celis de Almeida Lopes
{"title":"Beyond plant genetics: microbiome-enhancing heterosis in plants.","authors":"Ademir S F Araujo, Shilpi Sharma, José Baldin Pinheiro, Angela Celis de Almeida Lopes","doi":"10.1016/j.tplants.2024.07.015","DOIUrl":"10.1016/j.tplants.2024.07.015","url":null,"abstract":"<p><p>Plant heterosis has been recognized as being primarily dependent on the genetics of contrasting parents. However, in recent work, Liu et al. describe 'endophytic microbiome-induced heterosis', showing distinct and diverse seed microbiomes in hybrids, which boosted seed germination compared with their parents. Here, we discuss the possible impact of this finding for sustainable agriculture.</p>","PeriodicalId":23264,"journal":{"name":"Trends in Plant Science","volume":" ","pages":"1292-1294"},"PeriodicalIF":17.3,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141902990","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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