Pakistan Journal of Biological Sciences最新文献

{"title":"Efficacy of Using <i>Bacillus subtilis</i> Enzyme as a Caffeine Level Reducer in Cascara Robusta Coffee (<i>Coffea canephora</i> L.).","authors":"Novi Fajar Utami, Berna Elya, Hayun Hayun, Kusmardi Kusmardi, Syamsu Nur","doi":"10.3923/pjbs.2023.600.606","DOIUrl":"10.3923/pjbs.2023.600.606","url":null,"abstract":"<p><p>&lt;b&gt;Background and Objective:&lt;/b&gt; An increase in the consumption of robusta coffee resulted in an increase in waste from coffee, one of the coffee wastes, namely coffee bean skins or cascara. Robusta coffee cascara contains 1-1.3 g of caffeine which causes side effects, such as insomnia and seizures etc. So this research aims to reduce the caffeine content in cascara by using &lt;i&gt;Bacillus subtilis&lt;/i&gt;. Using optimum conditions and capabilities. &lt;b&gt;Materials and Methods:&lt;/b&gt; The experiment was conducted from May to August, 2022 in the Pharmacy Laboratory, Faculty of Mathematics and Natural Sciences, Universitas Pakuan, Indonesia. Before optimizing, cascara was extracted using the ultrasonic assisted extraction (UAE) method, validated by the High-Performance Liquid Chromatography (HPLC) method to determine caffeine content and a paired sample t-test was performed using Statistical Package for the Social Sciences (SPSS). &lt;b&gt;Results:&lt;/b&gt; It showed that in validating the HPLC method, the wavelength of caffeine in cascara was 272 nm. The mobile phase was a mixture of methanol-water (adjust orthophosphate). The pH (2.4) (45:55), obtained the optimum decaffeination conditions at the concentration of bacteria &lt;i&gt;Bacillus subtilis&lt;/i&gt; 6% and a long incubation time of 24 hrs resulted in a decrease in caffeine content of 51.3843±0.2503%. &lt;b&gt;Conclusion:&lt;/b&gt; The results of the paired sample t-test indicate that the concentration of bacteria &lt;i&gt;Bacillus subtilis&lt;/i&gt; and incubation time significantly influence caffeine levels.</p>","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139707414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Digestive Enzyme Activities, Oxidative Status and Intestinal Histomorphometry of Rats Supplemented with Steviana, A Natural Sweetener.","authors":"Abdulmajeed Fahad Alrefaei, Kamal Ali Attia","doi":"10.3923/pjbs.2023.593.599","DOIUrl":"10.3923/pjbs.2023.593.599","url":null,"abstract":"<p><p>&lt;b&gt;Background and Objective:&lt;/b&gt; Stevia (&lt;i&gt;Stevia rebaudiana&lt;/i&gt;), often known as sweet leaf, is a perennial plant and a member of the Asteraceae family. The commercial version of stevia leaf powder, known as Steviana, is one of the most popular natural sweeteners in use today. The current study aimed to analyze the activities of gut digestive enzymes, intestinal oxidative state and intestinal histological structure in stevia-fed rats. &lt;b&gt;Materials and Methods:&lt;/b&gt; In this study, male rats were given Steviana and the oxidative condition of the gastrointestinal tract (GIT), the activities of certain digestive enzymes and the histomorphology of the GIT were examined. Animals used in experiments were split into 2 groups: Control and treated groups. For four consecutive weeks, the treatment group received a daily oral intake of 5 mg kg&lt;sup&gt;1&lt;/sup&gt; b.wt., of Steviana solution. At the end of the trial, serum, pancreas and intestinal tissue samples were taken. &lt;b&gt;Results:&lt;/b&gt; The Steviana sweetener has a strong antioxidative effect on both blood and intestinal tissue. Both sample types showed a decrease in malondialdehyde levels and a marked increase in superoxide dismutase (SOD) and glutathione peroxidase (GPx) activities compared to control samples. In samples of blood, pancreas and intestinal contents, the activities of digestive enzymes including α-amylase, lipase and protease were significantly elevated in Steviana-treated rats. In addition, histological analysis of the small intestine showed that in rats given Steviana sweetener, intestinal glandular crypt depth was more pronounced compared to the control animals. &lt;b&gt;Conclusion:&lt;/b&gt; In summary, consumption of Steviana appears to enhance digestion and absorption processes through antioxidative effects, improving the health of the local GIT and subsequently accelerating the rate of synthesis and release of endogenous digestive enzymes. Another aspect that enhances the digestion and absorption process is the change in the histological structure of the intestinal glands, as shown by an increase in the crypt depth.</p>","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139707512","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Miracle Tree (<i>Moringa oleifera</i>) Attuned GFAP and Synaptophysin Levels, Oxidative Stress and Biomarkers in Cerebellar Fluorosis of Pregnant Rats.","authors":"Amira El-Helaly, Amoura M Abou-El-Naga, Khulud M Alshehri, Mai Alaa El-Dein","doi":"10.3923/pjbs.2023.628.650","DOIUrl":"10.3923/pjbs.2023.628.650","url":null,"abstract":"<p><p>&lt;b&gt;Background and Objective:&lt;/b&gt; Cerebellar fluorosis is a health issue associated with excessive exposure to fluoride (F) either in direct or indirect ways as pesticides, drinking water and caries preventing prescriptions. It is characterized by elevation in oxidative stress, inflammation, demyelination and Purkinje cell loss. &lt;i&gt;Moringa oleifera&lt;/i&gt; (M), is a widely cultivated plant used as a health-booster agent in modulating various disorders because of its high content of vitamins and minerals. The beneficial effect of moringa against fluoride-induced cerebellar toxicity in pregnant rats was investigated in this study. &lt;b&gt;Materials and Methods:&lt;/b&gt; Twenty pregnant rats were administered daily 300 mg kg&lt;sup&gt;&lt;/sup&gt;&lt;sup&gt;1&lt;/sup&gt; &lt;i&gt;M. oleifera&lt;/i&gt; aqueous extract incorporated with 10 mg kg&lt;sup&gt;&lt;/sup&gt;&lt;sup&gt;1&lt;/sup&gt; of F intoxication from the 1st day of gestation until the 20th day. Following the termination of the trial, sera were collected and cerebellar tissue was removed for further examinations, along with the assessment of maternity. &lt;b&gt;Results:&lt;/b&gt; The &lt;i&gt;M. oleifera&lt;/i&gt; significantly normalized serum FSH, LH, progesterone, dopamine and serotonin levels of F-intoxicated mothers. Additionally, &lt;i&gt;M. oleifera&lt;/i&gt; markedly prevented the lipid peroxidation and DNA fragmentation indicated by the tail length and moment in comet assay (-34.4 and -75.3%, respectively, when compared to the fluoride intoxicated group), while sustaining the levels of SOD and CAT revealing its antioxidant activity. The &lt;i&gt;M. oleifera&lt;/i&gt; regressed the cerebellar α-amylase (-25.4%) and acetylcholinesterase activity (-40.6%), also attenuated GFAP (-73.4%, p<0.0001), synaptophysin level (216.6%, p<0.0001) and IL-6 expression (-91.2%) comparing to fluoride only treated mothers. &lt;b&gt;Conclusion:&lt;/b&gt; Histological and ultrastructural examinations confirmed the recuperating effects of &lt;i&gt;M. oleifera&lt;/i&gt; on mothers' cerebellar tissue intoxicated with fluoride indicated by intact folia and restored Purkinje cells number and architecture. The maternal study emphasized the anti-abortifacient activity of moringa against fluoride induced-fetotoxicity.</p>","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139707415","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Isolation and Characterization of Thraustochytrium Trk-23 Producing Docosahexaenoic Acid from North Kalimantan, Indonesia","authors":"Witono Basuki, Rofiq Sunaryanto, Andri Frediansya, Ika Rahmatul Layly, Yusnitati, R. Giarni, Abdul Wakhid Shodiq","doi":"10.3923/pjbs.2023.567.575","DOIUrl":"https://doi.org/10.3923/pjbs.2023.567.575","url":null,"abstract":"","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139318951","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"In vitro Culture Optimization of Pomelo Seeds (Citrus maxima (Burm.) Merr.): A South Sulawesi Orange","authors":"Mustika Tuwo, T. Kuswinanti, Andi Nasruddin, E. Tambaru","doi":"10.3923/pjbs.2023.576.585","DOIUrl":"https://doi.org/10.3923/pjbs.2023.576.585","url":null,"abstract":"","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139319151","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Chemical Constituents and in vitro Antibacterial Activity of Fixed Oils from Different Parts of Bridelia stipularis (L.) Blume","authors":"Sharjana Rahman, Shahin Aziz, Sadia Afrin, Nasim Ahmed, Salma Ahmed, S. M. Al-Reza","doi":"10.3923/pjbs.2023.549.556","DOIUrl":"https://doi.org/10.3923/pjbs.2023.549.556","url":null,"abstract":"","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139318944","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Exploring the Potential of Sago Caterpillars as Cooking Oils: Extraction, Purifying and Characterization","authors":"Feti Fatimah, S. Gugule, D. G. Katja, A. D. Wuntu, Stevie Karouw, Jane Sulinda Tambas, Maureen Kumaunang, Chaleb Paul Maanari, Anderson Arnold Aloanis","doi":"10.3923/pjbs.2023.557.566","DOIUrl":"https://doi.org/10.3923/pjbs.2023.557.566","url":null,"abstract":"","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139319090","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"A Study of the Medicinal Plants of Genus <i>Orthosiphon</i> sp.: Aiming to Expand Valuable Medicinal Resources for Medical Treatment.","authors":"Van Duong Thieu, Van Be Nam Tran, Van Hung Mai, Thanh Trong Pham","doi":"10.3923/pjbs.2023.586.592","DOIUrl":"https://doi.org/10.3923/pjbs.2023.586.592","url":null,"abstract":"<p><p>&lt;b&gt;Background and Objective:&lt;/b&gt; &lt;i&gt;Orthosiphon&lt;/i&gt; sp., contains many active ingredients that are beneficial to health. In addition to prevention, they are also used in treatment. This study aims to evaluate the agronomic characteristics of 9 &lt;i&gt;Orthosiphon&lt;/i&gt; sp., based on morphology and combine molecular biology methods to determine the genetic relationship based on the \"ITS1-4\" gene region. &lt;b&gt;Materials and Methods:&lt;/b&gt; Nine seed samples/species &lt;i&gt;Orthosiphon&lt;/i&gt; sp., grown in 9 provinces in South Vietnam were collected and planted for survey at the Can Tho experimental farm. The method of observing and describing the external morphology and microdissection of the eye cage is carried out. The DNA extraction was performed at the Molecular Biology Laboratory, Institute of Food and Biotechnology, Can Tho University. &lt;b&gt;Results:&lt;/b&gt; There are differences in some parameters except leaf width and flower diameter. A simple pedigree chart can classify nine cat breeds into 3 groups: Group I includes An Giang (Râ1), Ca Mau (Râ2) and Can Tho (Râ3) breeds that are genetically close to each other and have only the same quantity, group II includes 2 varieties of Vinh Long (Râ8) and Dong Thap (Râ6), group III includes 4 identical samples in Kien Giang (Râ7), Hau Giang (Râ4), Soc Trang (Râ5) and Tien Giang (Râ9). &lt;b&gt;Conclusion:&lt;/b&gt; With molecular biology techniques, 9 cat breeds have been identified, all belonging to the species &lt;i&gt;Orthosiphon aristatus&lt;/i&gt;. However, to have more accurate and complete conclusions, it is necessary to study some specific gene sequences related to the morphology and substances contained in the plant.</p>","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139403951","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Research on <i>Passiflora foetida</i> L. as a Pharmaceutical Treatment for Neurasthenia in Humans.","authors":"Van Mai Do, Van Duong Thieu, Van Hung Mai","doi":"10.3923/pjbs.2023.504.509","DOIUrl":"https://doi.org/10.3923/pjbs.2023.504.509","url":null,"abstract":"<p><p>&lt;b&gt;Background and Objective:&lt;/b&gt; This plant is known in many parts of the world and is used as medicine in some countries. In Vietnam, people know how to use &lt;i&gt;Passiflora foetida &lt;/i&gt;L.,&lt;i&gt; &lt;/i&gt;as an herb. There are many research works in the world, most of them focus on medicinal properties. The objective of this study was to determine the genetic diversity of samples of &lt;i&gt;Passiflora foetida &lt;/i&gt;L., yellow fruit based on agronomic traits and the gene region of \"&lt;i&gt;rbcL&lt;/i&gt;\". &lt;b&gt;Materials and Methods:&lt;/b&gt; Seed samples were arranged in a completely randomized design with three replications. The trial was a sample of &lt;i&gt;Passiflora foetida &lt;/i&gt;L., species. The distance between sample plant is 3×2 m, so the total number of trees is 1,330 trees ha&lt;sup&gt;1&lt;/sup&gt;. The genetic relationship between them was determined through the construction of a phylogenetic tree in the \"&lt;i&gt;rbcL&lt;/i&gt;\" gene region sequence. Data analysis and processing methods done by using X software. &lt;b&gt;Results:&lt;/b&gt; The PCR results that amplify the \"&lt;i&gt;rbcL&lt;/i&gt;\" gene region around 670 bp, the PCR products were then sequenced. The sequence results were compared with the sequences on the NCBI gene bank, showing that the sequences of the nine varieties/species all coincided with the &lt;i&gt;Passiflora foetida &lt;/i&gt;Sims species sequences with a high similarity coefficient from 98.77 to 99.9%. Genetically shows that all nine species samples belong to &lt;i&gt;Passiflora foetida&lt;/i&gt; which can be classified into three genetic samples of An Giang (LA1), Ca Mau (LA2) and Can Tho (LA3) which are genetically close to each other, have the same index. &lt;b&gt;Conclusion:&lt;/b&gt; The heritability in the broad sense is high in the two traits of stem height and leaf length, so it can be considered that these two traits are controlled by genes. The cultivation of algae seeds to improve the productivity of these medicinal plant varieties is important in providing raw materials for the oriental medicine industry.</p>","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138800699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Assessment of Life Form and Adaptive Capacity of Coral Reef Ecosystem in Tanjung Tiram Waters, Southeast Sulawesi.","authors":"Kangkuso Analuddin, Muhammad Helmi, Luky Adrianto, Wa Iba, L M Golok Jaya, Andi Septiana, Rempei Suwa, Kazuo Nadaoka, Takashi Nakamura, Lalang","doi":"10.3923/pjbs.2023.534.542","DOIUrl":"https://doi.org/10.3923/pjbs.2023.534.542","url":null,"abstract":"<p><p>&lt;b&gt;Background and Objective:&lt;/b&gt; The coastal areas of Southeast Sulawesi are households of rich coastal ecosystems, which provide precious ecosystem services for society, but recent conditions might be suffered by various natural and anthropogenic pressures. This study aimed to elucidate the life forms and adaptive capacity of the coral reefs ecosystem in the Tanjung Tiram waters, as one of the potential tourist places in Southeast Sulawesi. &lt;b&gt;Materials and Methods:&lt;/b&gt; Observation of the life form and adaptive capacity of coral reefs was carried out using the LIT (line intercept transect) method. The adaptive capacity components of the coral reef ecosystem were assessed including: (1) Coral reef dimensional index (IDCR), (2) Coral cover (%), (3) Dominance of life forms, (4) Number of life form species, (5) Number of reef fish species, (6) Depth of coral reefs and (7) Distance of coral reef ecosystems from residential areas. &lt;b&gt;Results:&lt;/b&gt; The life forms of coral reefs consist of &lt;i&gt;Acropora&lt;/i&gt; and non-&lt;i&gt;Acropora&lt;/i&gt; corals. Adaptive capacity components of coral reefs showed different categories, such as the coral reef dimensional index belonging to the \"Low\" category, while mostly other adaptive capacity parameters including coral cover, the coral life forms and the number of coral fish belong to the \"Moderate\" category except for the number of life-form species of coral reefs is in the high category. The distance of the coral reef ecosystem is very near to human settlements of Tanjung Tiram Village and thus coral reef ecosystems are affected by human activities. &lt;b&gt;Conclusion:&lt;/b&gt; Overall, the adaptive capacity of the coral reef ecosystem in Tanjung Tiram waters was a moderate category, thus, efforts must be made such as by coral transplantation, conservation, etc., to increase the coral reefs' adaptive capacity in the coastal regions of Southeast Sulawesi.</p>","PeriodicalId":19800,"journal":{"name":"Pakistan Journal of Biological Sciences","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138800300","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}