Nucleosides, Nucleotides & Nucleic Acids最新文献

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Distinct regulation mechanism of immune-related genes in left-sided and right-sided colon cancer. 免疫相关基因在左右两侧结肠癌中的不同调控机制。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-23 DOI: 10.1080/15257770.2025.2521554
Tianfei Yi, Qi Liao, Zhiqin Jiang
{"title":"Distinct regulation mechanism of immune-related genes in left-sided and right-sided colon cancer.","authors":"Tianfei Yi, Qi Liao, Zhiqin Jiang","doi":"10.1080/15257770.2025.2521554","DOIUrl":"https://doi.org/10.1080/15257770.2025.2521554","url":null,"abstract":"<p><p>Colon cancer is one of the most common cancers in worldwide. Emerging evidence has demonstrated distinct patterns of immune infiltration between left colon cancer (LCC) and right colon cancer (RCC), classified according to primary tumor location. However, the underlying mechanism was still unknown. Here, we identified 111 more up-regulated genes (MURGs) including <i>PD1</i> (<i>PDCD1</i>) and <i>CTLA4</i> in RCC and 166 more down-regulated genes (MDRGs) in LCC, all participating in immune-related biological processes. Notably, <i>CD83</i>, <i>CXCR4</i> and <i>ISL1</i> emerged as reversely regulated immune-related genes (IRGs) showing opposite regulation patterns between the two cancer types. Through regulatory network analysis, we found that genetic mutations predominantly drive enhanced immune infiltration in RCC through IRG up-regulation, whereas DNA methylation-mediated IRG suppression accounts for diminished immune responses in LCC. Furthermore, prognostic models based on these IRGs with high-quality were constructed in LCC and RCC respectively. In conclusion, our results provide crucial insights into the divergent immunoregulatory mechanisms governing LCC and RCC, potentially facilitating the discovery of novel biomarkers for prognosis prediction and targeted therapy.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-28"},"PeriodicalIF":1.1,"publicationDate":"2025-06-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144476146","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MiR-922 alleviates LPS-induced HK-2 cell apoptosis and inflammation through TGF-β/Smad. MiR-922通过TGF-β/Smad缓解lps诱导的HK-2细胞凋亡和炎症。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-22 DOI: 10.1080/15257770.2025.2518554
Bo Yang, Li Xu, Peng Zhou, Qihao Ma, Yong Li, Danan Sun
{"title":"MiR-922 alleviates LPS-induced HK-2 cell apoptosis and inflammation through TGF-β/Smad.","authors":"Bo Yang, Li Xu, Peng Zhou, Qihao Ma, Yong Li, Danan Sun","doi":"10.1080/15257770.2025.2518554","DOIUrl":"10.1080/15257770.2025.2518554","url":null,"abstract":"<p><strong>Background: </strong>MicroRNAs play an extensive role in human chronic kidney diseases (CKD), but the role of miR-922 remains unclear.</p><p><strong>Purpose: </strong>This study was designed to investigate the potential mechanism by which miR-922 acts in CKD.</p><p><strong>Methods: </strong>The human proximal renal tubular cell line (HK-2) was treated by LPS to build a CKD cell model. The expressions of miR-922, TGFβR1, and p-Smad2/3 were detected by RT-qPCR or western blotting. The dual-luciferase reporter assay verified the interaction of miR-922 with TGFβR1. Cell viability and apoptosis were assessed using the CCK-8 assay and Annexin V-FITC/PI method. An ELISA kit was used for the measure of TNF-α/IL-1β levels.</p><p><strong>Results: </strong>MiR-922 was scanty in HK-2 cells with LPS treatment. MiR-922 was an upstream regulator of TGFβR1. The up-regulation of miR-922 restrained TGFβR1 expression, thereby hindering the activation of Smad2/3. Overexpression of miR-922 and inhibition of Smad2/3 alleviated the LPS-induced apoptosis and inflammation, while TGFβR1 played a pro-apoptotic and pro-inflammatory role.</p><p><strong>Conclusion: </strong>MiR-922 rescued HK-2 cell apoptosis and inflammation damage induced by LPS through negative regulation of TGF-β/Smad pathway, which may be a vital molecular mechanism of CKD.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-11"},"PeriodicalIF":1.1,"publicationDate":"2025-06-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144369029","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of lung squamous cell carcinoma subtypes based on STING pathway expression and validation of prognostic features. 基于STING通路表达的肺鳞状细胞癌亚型鉴定及预后特征验证
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-14 DOI: 10.1080/15257770.2025.2505467
Wenjun Liu, Dezhong Cheng
{"title":"Identification of lung squamous cell carcinoma subtypes based on STING pathway expression and validation of prognostic features.","authors":"Wenjun Liu, Dezhong Cheng","doi":"10.1080/15257770.2025.2505467","DOIUrl":"https://doi.org/10.1080/15257770.2025.2505467","url":null,"abstract":"<p><p>Lung squamous cell carcinoma (LUSC), a prevalent non-small cell lung cancer subtype, demonstrates marked heterogeneity and unpredictable prognosis. This study established a prognostic model using STING pathway-related genes to stratify LUSC patients and guide immunotherapy. Through weighted gene co-expression network analysis of TCGA-LUSC data, we identified the MEbrown module containing 13 STING-associated key genes (including CD47 and CLDN5) to develop the STING Pathway Death-Related Signature (SPDRS). LASSO regression refined the model, which effectively stratified patients into distinct high- and low-risk groups with significant survival differences. High-risk patients exhibited enhanced immune infiltration, particularly T cells CD4 memory resting and M2 macrophages, along with elevated immune checkpoint expression and stromal scores. Functional analyses revealed enrichment in immune-related pathways and tumor microenvironment regulation. Drug sensitivity predictions identified potential therapeutic agents targeting SPDRS components. A nomogram integrating SPDRS with clinical factors demonstrated strong prognostic accuracy. This work provides a novel STING pathway-based stratification system that elucidates tumor microenvironment heterogeneity and informs personalized treatment strategies. The findings highlight SPDRS as both a prognostic biomarker and therapeutic response predictor, advancing precision immunotherapy in LUSC management.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-18"},"PeriodicalIF":1.1,"publicationDate":"2025-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144294172","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of key genes in the liver of offspring from obesity maternal mice by bioinformatics analysis. 利用生物信息学分析鉴定肥胖母鼠后代肝脏关键基因。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-13 DOI: 10.1080/15257770.2025.2517378
Qiu-Tong Chen, Ming-Wei Liu, Hong-Jie Yu, Jie Zhang, Qi-Qiang He
{"title":"Identification of key genes in the liver of offspring from obesity maternal mice by bioinformatics analysis.","authors":"Qiu-Tong Chen, Ming-Wei Liu, Hong-Jie Yu, Jie Zhang, Qi-Qiang He","doi":"10.1080/15257770.2025.2517378","DOIUrl":"https://doi.org/10.1080/15257770.2025.2517378","url":null,"abstract":"<p><p>Murine maternal obesity predisposes offspring to obesity and other non-communicable diseases. Fetal programming enables researchers to trace this detrimental effect in the early life of the offspring. The aim of the current study was to explore the molecular impact of maternal obesity on the livers of murine offspring at weaning age. C57BL/6 female mice were exposed to a high-fat diet to induce obesity, after which they were mated to produce offspring. At weaning age, the metabolic health of female offspring was assessed and hepatic mRNAs were investigated <i>via</i> mRNA high throughput sequencing. The differentially expressed genes were identified using gene and protein expression analyses. The results revealed that murine maternal obesity altered the blood parameters, liver histology and gene expression of offspring. Cyclin-dependent kinase 1 (Cdk1) and E2f transcription factor 1 (E2f1) were identified as hub genes by bioinformatics analysis. Reverse transcription-quantitative PCR, western blotting and immunohistochemical analysis all revealed that the expression of Cdk1 and E2f1 was decreased in the livers of offspring born from obese does. In conclusion, murine maternal obesity impaired lipid metabolism in the livers of their offspring at weaning age. Furthermore, Cdk1 and E2f1 were identified as hub genes in the regulatory mechanism.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-17"},"PeriodicalIF":1.1,"publicationDate":"2025-06-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144289425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A positive correlation between the pseudorotational phase angle P and the δH torsion angle (H4'-C4'-C3'-H3') in nucleosides and nucleic acids. 核苷和核酸的赝旋相角P与δH扭角(H4′-C4′-C3′-H3′)呈正相关。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-11 DOI: 10.1080/15257770.2025.2516597
Jesse Vanloon, Alexander Y Yan, Hongbin Yan
{"title":"A positive correlation between the pseudorotational phase angle <i>P</i> and the δ<sub>H</sub> torsion angle (H4'-C4'-C3'-H3') in nucleosides and nucleic acids.","authors":"Jesse Vanloon, Alexander Y Yan, Hongbin Yan","doi":"10.1080/15257770.2025.2516597","DOIUrl":"https://doi.org/10.1080/15257770.2025.2516597","url":null,"abstract":"<p><p>Examination of structures of DNA duplexes (A-, B-, and Z-DNA) showed a positive correlation between the pseudorotational phase angle <i>P</i> and the torsion angle δ<sub>H</sub> (H4'-C4'-C3'-H3'). Such a <i>P</i> - δ<sub>H</sub> plot reflects the structural features of the three types of DNA duplexes. Since the δ<sub>H</sub> torsion angle can be measured by nuclear magnetic resonance, the linear correlation between <i>P</i> and δ<sub>H</sub> provides a useful method for predicting the sugar pucker of nucleosides and nucleic acids.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-10"},"PeriodicalIF":1.1,"publicationDate":"2025-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144275486","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Co-regulation of miRNA and lncRNA on immunosuppression gene: unveiling the regulatory networks in cancer. miRNA和lncRNA对免疫抑制基因的共同调控:揭示肿瘤中的调控网络。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-06 DOI: 10.1080/15257770.2025.2514129
A G Dharini, Priyatharcini Kejamurthy, K T Ramya Devi
{"title":"Co-regulation of miRNA and lncRNA on immunosuppression gene: unveiling the regulatory networks in cancer.","authors":"A G Dharini, Priyatharcini Kejamurthy, K T Ramya Devi","doi":"10.1080/15257770.2025.2514129","DOIUrl":"https://doi.org/10.1080/15257770.2025.2514129","url":null,"abstract":"<p><p>Cancer cells often evade immune detection and destruction by inducing immune suppression genes, which include CTLA-4, TGF-β, and PD-L1, that inhibit immune responses and promote tumour progression. Recent studies have highlighted the significance of non-coding RNAs, particularly microRNAs (miRNAs) and long non-coding RNAs (lncRNAs), in regulating these immune suppression pathways. miRNAs, short RNA molecules that target mRNA of immune genes at the post-transcription level and influence gene expression. Similarly, lncRNAs, which act as molecular scaffolds, sponges, or regulators of gene expression, are involved in modulating immune responses by interacting with miRNAs or directly binding to immune-related genes. This review explores the complex interplay between miRNAs, lncRNAs, and immune suppression genes, detailing how these non-coding RNAs contribute to immune evasion in cancer. Furthermore, the therapeutic potential of targeting these regulatory networks is examined, highlighting current strategies and challenges in using miRNA and lncRNA modulators to enhance anti-tumour immunity. Understanding these intricate regulatory networks offers new insights into the mechanisms of immune suppression in cancer and opens avenues for developing novel therapeutic interventions to restore immune surveillance and improve the efficacy of cancer immunotherapies.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-30"},"PeriodicalIF":1.1,"publicationDate":"2025-06-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248945","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Aptamers as therapeutic targets: prospects and progress in the treatment of cancers. 适体作为治疗靶点:癌症治疗的前景与进展。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-06 DOI: 10.1080/15257770.2025.2512853
Yash Sansare, Priyatharcini Kejamurthy, Suramya Singh, Aryan Ayush, Koustubhi Khani, K T Ramya Devi
{"title":"Aptamers as therapeutic targets: prospects and progress in the treatment of cancers.","authors":"Yash Sansare, Priyatharcini Kejamurthy, Suramya Singh, Aryan Ayush, Koustubhi Khani, K T Ramya Devi","doi":"10.1080/15257770.2025.2512853","DOIUrl":"https://doi.org/10.1080/15257770.2025.2512853","url":null,"abstract":"<p><p>Contemporary cancer treatments encompass diverse strategies like surgery, chemotherapy, radiation, immunotherapy, and targeted therapies, aiming for effective cancer cell control with minimal impact on healthy tissues. Aptamers are short nucleotide sequences typically containing 25-80 bases and can attach to specific target molecules as effectively as monoclonal antibodies. While the FDA has yet to approve any aptamers for oncology applications, a few, such as Pegaptanib (Macugen), have been approved for ophthalmologic conditions like age-related macular degeneration. Pegaptanib and Izervay are the approved aptamers against age-related macular degeneration (AMD) that target vascular endothelial growth factor (VEGF) and block complement component protein C5, respectively. A new type of highly sensitive and specific biosensor has recently been created to detect leukaemia cancer cells. Aptamosomes, encapsulating drugs like doxorubicin, effectively reduce tumour size and are highly advantageous over targeted drug delivery. Many aptamers have been generated against ERα, Epithelial cell adhesion molecule, EGFR, B subunit of platelet-derived growth factor, Vimentin, Osteopontin, Type II membrane protein PSMA, MUC-1, AXL receptor tyrosine kinase, CD28 agonistic aptamer, as well as for the B7-CD28 interaction, etc. This review suggests the pros and cons of aptamer usage and its advantages over antibody treatment. It also outlines the roles of aptamers and connects their modes of action with specific cancer types. The content is highly detailed, providing a comprehensive understanding of aptamer therapy and its applications.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-39"},"PeriodicalIF":1.1,"publicationDate":"2025-06-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144248944","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigating the interactions of Axitinib, a tyrosine kinase inhibitor, with DNA: experimental studies, molecular docking, and molecular dynamics simulations. 研究酪氨酸激酶抑制剂阿西替尼与DNA的相互作用:实验研究、分子对接和分子动力学模拟。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-02 DOI: 10.1080/15257770.2025.2509977
Pelin Şenel, Abdullah Al Faysal, Soykan Agar, Mine Yurtsever, Ayşegül Gölcü
{"title":"Investigating the interactions of Axitinib, a tyrosine kinase inhibitor, with DNA: experimental studies, molecular docking, and molecular dynamics simulations.","authors":"Pelin Şenel, Abdullah Al Faysal, Soykan Agar, Mine Yurtsever, Ayşegül Gölcü","doi":"10.1080/15257770.2025.2509977","DOIUrl":"https://doi.org/10.1080/15257770.2025.2509977","url":null,"abstract":"<p><p>Axitinib is an oral medication classified as a second-generation tyrosine kinase inhibitor. It serves as a primary treatment for metastatic renal cell carcinoma (RCC) due to its strong affinity for DNA, which leads to the disruption of the double helix structure. This disruption ultimately halts the cell cycle and induces senescence and mitotic catastrophe in RCC cells. Consequently, investigating the mechanism by which Axitinib binds to DNA is essential for comprehending its pharmacodynamic properties and for the advancement of more effective DNA-binding therapeutics. The present study aimed to examine the interaction between Axitinib and DNA through various analytical techniques, including UV-Vis spectroscopy, thermal denaturation assays, electrochemical methods, and fluorescence emission spectroscopy. According to the electrochemical studies, the binding constant (<i>K<sub>b</sub></i>) for Axitinib was calculated to be (5.13 ± 0.28) × 10<sup>4</sup>, suggesting the potential for groove binding. This finding was further supported by in-silico analyses, where molecular docking and molecular dynamics simulations indicated that the drug selectively binds to the DNA minor groove through partial intercalation, forming new hydrogen bonds with its functional groups while separating the guanine and cytosine base pairs.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-24"},"PeriodicalIF":1.1,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144209051","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biophysical and electrochemical studies on the interaction of arbutin drug with calf-thymus DNA. 熊果苷类药物与小牛胸腺DNA相互作用的生物物理和电化学研究。
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-02 DOI: 10.1080/15257770.2025.2512857
D S Bhuvaneshwari, Kandasamy Pavithra, Kuppanagounder P Elango
{"title":"Biophysical and electrochemical studies on the interaction of arbutin drug with calf-thymus DNA.","authors":"D S Bhuvaneshwari, Kandasamy Pavithra, Kuppanagounder P Elango","doi":"10.1080/15257770.2025.2512857","DOIUrl":"https://doi.org/10.1080/15257770.2025.2512857","url":null,"abstract":"<p><p>Understanding the interaction of therapeutic drugs with DNA is crucial for designing highly selective DNA-targeted medicines that could overcome the current therapeutic limitations. In this endeavour, the DNA binding behaviour of arbutin (<b>ATN</b>) was explored using multi-spectroscopic, electrochemical and computational studies. The UV-Vis spectral studies authenticated the complexation of <b>ATN</b> with CT-DNA and exposed <b>ATN</b> as a moderately strong DNA binder with a binding constant of 8.029 × 10<sup>3</sup> M<sup>-1</sup>. The findings of fluorescence spectral studies not only revealed the spontaneous ground state complex formation between <b>ATN</b> and CT-DNA, but also emphasised the role of hydrogen bonding and Van der Waals interactions in stabilising the <b>ATN</b>/CT-DNA complex. Since the competitive dye displacement assay strongly excluded the plausibility of classical intercalation and conventional groove binding mode of <b>ATN</b>, viscosity studies provided clues regarding the external binding mode of <b>ATN</b>. The appreciable enhancement resulted in the fluorescence emission of the <b>ATN</b>/CT-DNA complex upon increasing NaCl concentration, which certified <b>ATN</b> as an external binder. The CD spectral results exposed the <b>ATN</b>-induced moderate conformational alterations in CT-DNA. Remarkably, the voltammetric titration results labelled the glucopyranoside moiety of <b>ATN</b> as a DNA binding unit with a formation constant of 2.57 × 10<sup>4</sup> M<sup>-1</sup> rather than the hydroquinone moiety of <b>ATN</b>. Molecular docking and metadynamics simulation outcomes served as pictorial evidence of experimental results. They revealed the predominant contribution of hydrogen bonding interactions in stabilising <b>ATN</b>/DNA complexation.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-23"},"PeriodicalIF":1.1,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144199749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MiR-34a rs2666433 and cognitive function in major depressive disorder: a clinical correlation analysis. MiR-34a rs2666433与重度抑郁症认知功能的临床相关性分析
IF 1.1 4区 生物学
Nucleosides, Nucleotides & Nucleic Acids Pub Date : 2025-06-02 DOI: 10.1080/15257770.2025.2511106
Ning Li, Xiaochuan Zhao
{"title":"MiR-34a rs2666433 and cognitive function in major depressive disorder: a clinical correlation analysis.","authors":"Ning Li, Xiaochuan Zhao","doi":"10.1080/15257770.2025.2511106","DOIUrl":"https://doi.org/10.1080/15257770.2025.2511106","url":null,"abstract":"<p><strong>Background: </strong>Genetic factors play a crucial role in the development of major depressive disorder (MDD).</p><p><strong>Objectives: </strong>This study aimed to investigate the association between the microRNA (miR)-34a rs266643 polymorphism and MDD, as well as its impact on cognitive function.</p><p><strong>Materials and methods: </strong>Clinical data and blood samples were collected from 302 MDD patients and 306 healthy controls who met the predefined inclusion and exclusion criteria. The severity of MDD in patients was assessed using the Hamilton Rating Scale for Depression (HRSD). Cognitive function in MDD patients was evaluated using the Mini-Mental State Examination (MMSE), Stroop Color-Word Test (Stroop-C and Stroop-CW), and Montreal Cognitive Assessment (MoCA). Gene typing was performed using the Sanger sequencing method, while the relative expression level of miR-34a was quantified by RT-qPCR.</p><p><strong>Results: </strong>The MDD group exhibited a significantly higher miR-34a expression fold change compared to the control group (<i>p</i> < 0.001). Among the genotypes, the AA genotype demonstrated the highest expression, followed by GA, with both being significantly greater than GG. The expression of miR-34a was positively correlated with HRSD, Stroop-C, and Stroop-CW scores but negatively correlated with MMSE and MoCA scores (<i>p</i> < 0.001). Carrying the A allele (OR = 1.468, <i>p</i> = 0.002) or the AA genotype (OR = 2.382, <i>p</i> = 0.001) was associated with an increased risk of MDD. Furthermore, patients with the AA genotype exhibited significantly poorer cognitive function compared to other genotypes.</p><p><strong>Conclusion: </strong>The gene polymorphism of miR-34a rs2666433 was significantly associated with the severity of MDD as well as cognitive function.</p>","PeriodicalId":19343,"journal":{"name":"Nucleosides, Nucleotides & Nucleic Acids","volume":" ","pages":"1-14"},"PeriodicalIF":1.1,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144209052","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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