NMR in Biomedicine最新文献

{"title":"Comprehensive quantitative magnetic resonance imaging assessment of skeletal muscle pathophysiology in golden retriever muscular dystrophy: Insights from multicomponent water T2 and extracellular volume fraction.","authors":"Ericky Caldas de Almeida Araujo, Inès Barthélémy, Yves Fromes, Pierre-Yves Baudin, Stéphane Blot, Harmen Reyngoudt, Benjamin Marty","doi":"10.1002/nbm.5278","DOIUrl":"10.1002/nbm.5278","url":null,"abstract":"<p><p>Quantitative MRI and MRS have become important tools for the assessment and management of patients with neuromuscular disorders (NMDs). Despite significant progress, there is a need for new objective measures with improved specificity to the underlying pathophysiological alteration. This would enhance our ability to characterize disease evolution and improve therapeutic development. In this study, qMRI methods that are commonly used in clinical studies involving NMDs, like water T2 (T2_H2O) and T1 and fat-fraction (FF) mapping, were employed to evaluate disease activity and progression in the skeletal muscle of golden retriever muscular dystrophy (GRMD) dogs. Additionally, extracellular volume (ECV) fraction and single-voxel bicomponent water T2 relaxometry were included as potential markers of specific histopathological changes within the tissue. Apart from FF, which was not significantly different between GRMD and control dogs and showed no trend with age, T2_H2O, T1, ECV, and the relative fraction of the long-T2 component, A₂, were significantly elevated in GRMD dogs across all age ranges. Moreover, longitudinal assessment starting at 2 months of age revealed significant decreases in T2_H2O, T1, ECV, A₂, and the T2 of the shorter-T2 component, T2₁, in both control and GRMD dogs during their first year of life. Notably, insights from ECV and bicomponent water T2 indicate that (I) the elevated T2_H2O and T1 values observed in dystrophic muscle are primarily driven by an expansion of the extracellular space, likely driven by the edematous component of inflammatory responses to tissue injury and (II) the significant decrease of T2_H2O and T1 with age in control and GRMD dogs reflects primarily the progressive increase in fiber diameter and protein content during tissue development. Our study underscores the potential of multicomponent water T2 relaxometry and ECV to provide valuable insights into muscle pathology in NMDs.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5278"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602680/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142471077","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Stimulus-induced rotary saturation imaging of visually evoked response: A pilot study.","authors":"Milena Capiglioni, Roland Beisteiner, Pedro Lima Cardoso, Federico Turco, Baudouin Jin, Claus Kiefer, Simon Daniel Robinson, Andrea Federspiel, Siegfried Trattnig, Roland Wiest","doi":"10.1002/nbm.5280","DOIUrl":"10.1002/nbm.5280","url":null,"abstract":"<p><p>Spin-lock (SL) pulses have been proposed to directly detect neuronal activity otherwise inaccessible through standard functional magnetic resonance imaging. However, the practical limits of this technique remain unexplored. Key challenges in SL-based detection include ultra-weak signal variations, sensitivity to magnetic field inhomogeneities, and potential contamination from blood oxygen level-dependent effects, all of which hinder the reliable isolation of neuronal signals. This pilot study evaluates the performance of the stimulus-induced rotary saturation (SIRS) technique to map visual stimulation response in the human cortex. A rotary echo spin-lock (RESL) preparation followed by a 2D echo planar imaging readout was used to investigate 12 healthy subjects at rest and during continuous exposure to 8 Hz flickering light. The SL amplitude was fixed to the target neuroelectric oscillations at that frequency. The signal variance was used as contrast metric, and two alternative post-processing pipelines (regression-filtering-rectification and normalized subtraction) were statistically evaluated. Higher variance in the SL signal was detected in four of the 12 subjects. Although group-level analysis indicated activation in the occipital pole, analysis of variance revealed that this difference was not statistically significant, highlighting the need for comparable control measures and more robust preparations. Further optimization in sensitivity and robustness is required to noninvasively detect physiological neuroelectric activity in the human brain.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5280"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11602267/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142576707","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"MRI denoising with a non-blind deep complex-valued convolutional neural network.","authors":"Quan Dou, Zhixing Wang, Xue Feng, Adrienne E Campbell-Washburn, John P Mugler, Craig H Meyer","doi":"10.1002/nbm.5291","DOIUrl":"10.1002/nbm.5291","url":null,"abstract":"<p><p>MR images with high signal-to-noise ratio (SNR) provide more diagnostic information. Various methods for MRI denoising have been developed, but the majority of them operate on the magnitude image and neglect the phase information. Therefore, the goal of this work is to design and implement a complex-valued convolutional neural network (CNN) for MRI denoising. A complex-valued CNN incorporating the noise level map (non-blind <math> <semantics><mrow><mi>ℂ</mi></mrow> <annotation>$$ mathbb{C} $$</annotation></semantics> </math> DnCNN) was trained with ground truth and simulated noise-corrupted image pairs. The proposed method was validated using both simulated and in vivo data collected from low-field scanners. Its denoising performance was quantitively and qualitatively evaluated, and it was compared with the real-valued CNN and several other algorithms. For the simulated noise-corrupted testing dataset, the complex-valued models had superior normalized root-mean-square error, peak SNR, structural similarity index, and phase ABSD. By incorporating the noise level map, the non-blind <math> <semantics><mrow><mi>ℂ</mi></mrow> <annotation>$$ mathbb{C} $$</annotation></semantics> </math> DnCNN showed better performance in dealing with spatially varying parallel imaging noise. For in vivo low-field data, the non-blind <math> <semantics><mrow><mi>ℂ</mi></mrow> <annotation>$$ mathbb{C} $$</annotation></semantics> </math> DnCNN significantly improved the SNR and visual quality of the image. The proposed non-blind <math> <semantics><mrow><mi>ℂ</mi></mrow> <annotation>$$ mathbb{C} $$</annotation></semantics> </math> DnCNN provides an efficient and effective approach for MRI denoising. This is the first application of non-blind <math> <semantics><mrow><mi>ℂ</mi></mrow> <annotation>$$ mathbb{C} $$</annotation></semantics> </math> DnCNN to medical imaging. The method holds the potential to enable improved low-field MRI, facilitating enhanced diagnostic imaging in under-resourced areas.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5291"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11605166/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142624739","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"A signal model for fat-suppressed T₁-mapping and dynamic contrast-enhanced MRI with interrupted spoiled gradient-echo readout.","authors":"Myrte Wennen, Wilhelm Stehling, J Tim Marcus, Joost P A Kuijer, Cristina Lavini, Leo M A Heunks, Gustav J Strijkers, Bram F Coolen, Aart J Nederveen, Oliver J Gurney-Champion","doi":"10.1002/nbm.5289","DOIUrl":"10.1002/nbm.5289","url":null,"abstract":"<p><p>The conventional gradient-echo steady-state signal model is the basis of various spoiled gradient-echo (SPGR) based quantitative MRI models, including variable flip angle (VFA) MRI and dynamic contrast-enhanced MRI (DCE). However, including preparation pulses, such as fat suppression or saturation bands, disrupts the steady-state and leads to a bias in T₁ and DCE parameter estimates. This work introduces a signal model that improves the accuracy of VFA T₁-mapping and DCE for interrupted spoiled gradient-echo (I-SPGR) acquisitions. The proposed model was applied to a VFA T₁-mapping I-SPGR sequence in the Gold Standard T₁-phantom (3 T), in the brain of four healthy volunteers (3 T), and to an abdominal DCE examination (1.5 T). T₁-values obtained with the proposed and conventional model were compared to reference T₁-values. Bland-Altman analysis (phantom) and analysis of variance (in vivo) were used to test whether bias from both methods was significantly different (p = 0.05). The proposed model outperformed the conventional model by decreasing the bias in the phantom with respect to the phantom reference values (mean bias -2 vs. -35% at 3 T) and in vivo with respect to the conventional SPGR (-6 vs. -37% bias in T₁, p < 0.01). The proposed signal model estimated approximately 48% (depending on baseline T₁) higher contrast concentrations in vivo, which resulted in decreased DCE pharmacokinetic parameter estimates of up to 35%. The proposed signal model improves the accuracy of quantitative parameter estimation from disrupted steady-state I-SPGR sequences. It therefore provides a flexible method for applying fat suppression, saturation bands, and other preparation pulses in VFA T₁-mapping and DCE.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5289"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11617136/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142687567","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Correction to \"Different Grey Matter Microstructural Patterns in Cognitively Healthy Versus Typical Ageing\".","authors":"","doi":"10.1002/nbm.70017","DOIUrl":"https://doi.org/10.1002/nbm.70017","url":null,"abstract":"","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":"38 4","pages":"e70017"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143483598","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Acceleration of Simultaneous Multislice Magnetic Resonance Fingerprinting With Spatiotemporal Convolutional Neural Network.","authors":"Lan Lu, Yilin Liu, Amy Zhou, Pew-Thian Yap, Yong Chen","doi":"10.1002/nbm.5302","DOIUrl":"10.1002/nbm.5302","url":null,"abstract":"<p><p>Magnetic Resonance Fingerprinting (MRF) can be accelerated with simultaneous multislice (SMS) imaging for joint T₁ and T₂ quantification. However, the high inter-slice and in-plane acceleration in SMS-MRF causes severe aliasing artifacts, limiting the multiband (MB) factors to typically 2 or 3. Deep learning has demonstrated superior performance compared to the conventional dictionary matching approach for single-slice MRF, but its effectiveness in SMS-MRF remains unexplored. In this paper, we introduced a new deep learning approach with decoupled spatiotemporal feature learning for SMS-MRF to achieve high MB factors for accurate and volumetric T₁ and T₂ quantification in neuroimaging. The proposed method leverages information from both spatial and temporal domains to mitigate the significant aliasing in SMS-MRF. Neural networks, trained using either acquired SMS-MRF data or simulated data generated from single-slice MRF acquisitions, were evaluated. The performance was further compared with both dictionary matching and a deep learning approach based on residual channel attention U-Net. Experimental results demonstrated that the proposed method, trained with acquired SMS-MRF data, achieves the best performance in brain T₁ and T₂ quantification, outperforming dictionary matching and residual channel attention U-Net. With a MB factor of 4, rapid T₁ and T₂ mapping was achieved with 1.5 s per slice for quantitative brain imaging.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":"38 1","pages":"e5302"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11758274/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142780686","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"High-resolution perfusion imaging in rodents using pCASL at 9.4 T.","authors":"Sara Pires Monteiro, Lydiane Hirschler, Emmanuel L Barbier, Patricia Figueiredo, Noam Shemesh","doi":"10.1002/nbm.5288","DOIUrl":"10.1002/nbm.5288","url":null,"abstract":"<p><p>Adequate perfusion is critical for maintaining normal brain function and aberrations thereof are hallmarks of many diseases. Pseudo-Continuous Arterial Spin Labeling (pCASL) MRI enables noninvasive quantitative perfusion mapping without contrast agent injection and with a higher signal-to-noise ratio (SNR) than alternative methods. Despite its great potential, pCASL remains challenging, unstable, and relatively low-resolution in rodents - especially in mice - thereby limiting the investigation of perfusion properties in many transgenic or other relevant rodent models of disease. Here, we address this gap by developing a novel experimental setup for high-resolution pCASL imaging in mice and combining it with the enhanced SNR of cryogenic probes. We show that our new experimental setup allows for optimal positioning of the carotids within the cryogenic coil, rendering labeling reproducible. With the proposed methodology, we managed to increase the spatial resolution of pCASL perfusion images by a factor of 15 in mice; a factor of 6 in rats is gained compared to the state of the art just by virtue of the cryogenic coil. We also show that the improved pCASL perfusion imaging allows much better delineation of specific brain areas, both in healthy animals as well as in rat and mouse models of stroke. Our results bode well for future high-definition pCASL perfusion imaging in rodents.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5288"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11605498/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142604040","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Multinuclear MRI Can Depict Metabolic and Energetic Changes in Mild Traumatic Brain Injury.","authors":"Thomas M Thorsen, Nikolaj Bøgh, Lotte B Bertelsen, Esben S S Hansen, Christoffer Laustsen","doi":"10.1002/nbm.5306","DOIUrl":"10.1002/nbm.5306","url":null,"abstract":"<p><p>Mild traumatic brain injuries (TBIs) are frequent in the European population. The pathophysiological changes after TBI include metabolic changes, but these are not observable using current clinical tools. We aimed to evaluate multinuclear MRI as a mean of assessing these changes. In our model, pigs were exposed to a controlled cortical impact (CCI) directly on the dura and scanned at 2 h and 2 days after injury. A multinuclear MRI protocol was used. It included hyperpolarized [1-¹³C]pyruvate MRI, which allows depiction of hyperpolarized carbon-13, through its metabolism from pyruvate to lactate or bicarbonate. At Day 2, cerebral microdialysis were performed, and tissue was obtained for analyses. At Day 0, the cerebral blood flow was reduced in the affected hemisphere (TBI: 31.7 mL/100 mL/min, contralateral: 35.6 mL/100 mL/min, p = 0.1227), and the impacted area showed reduced oxygenation (R₂*, TBI: 33.11 s^-1, contralateral: 22.20 s^-1, p = 0.035). At both days, the lactate-to-pyruvate ratios (hyperpolarized [1-¹³C]pyruvate) were increased (Day 0: p = 0.023, Day 2: p = 0.022). However, this study can only evaluate the total injury and, thus, cannot differentiate effects from craniotomy and CCI. This metabolic difference was not found using cerebral microdialysis nor a lactate dehydrogenase (LDH) activity assay. The metabolic changes depicted in this study contributes to our understanding of mild TBI; however, the clinical potential of multinuclear MRI is yet to be determined.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":"38 1","pages":"e5306"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11646961/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142829533","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"A taxonomic guide to diffusion MRI tractography visualization tools.","authors":"Miriam Laamoumi, Tom Hendriks, Maxime Chamberland","doi":"10.1002/nbm.5267","DOIUrl":"10.1002/nbm.5267","url":null,"abstract":"<p><p>Visualizing neuroimaging data is a key step in evaluating data quality, interpreting results, and communicating findings. This survey focuses on diffusion MRI tractography, which has been widely used in both research and clinical domains within the neuroimaging community. With an increasing number of tractography tools and software, navigating this landscape poses a challenge, especially for newcomers. A systematic exploration of a diverse range of features is proposed across 27 research tools, delving into their main purpose and examining the presence or absence of prevalent visualization and interactive techniques. The findings are structured within a proposed taxonomy, providing a comprehensive overview. Insights derived from this analysis will help (novice) researchers, clinicians, and developers in identifying knowledge gaps and navigating the landscape of tractography visualization tools.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5267"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11631367/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142392150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Dynamic glucose-enhanced MRI of gliomas: A preliminary clinical application.","authors":"Jianhua Mo, Xiang Xu, Andong Ma, Mingjun Lu, Xianlong Wang, Qihong Rui, Jianbin Zhu, Haitao Wen, Genyun Lin, Linda Knutsson, Peter van Zijl, Zhibo Wen","doi":"10.1002/nbm.5265","DOIUrl":"10.1002/nbm.5265","url":null,"abstract":"<p><p>The study aimed to investigate the feasibility of dynamic glucose-enhanced (DGE) MRI technology in the clinical application of glioma. Twenty patients with glioma were examined using a preoperative DGE-MRI protocol before clinical intervention. A brief hyperglycemic state was achieved by injecting 50 mL of 50% w/w D-glucose intravenously during the DGE imaging. The total acquisition time for the DGE was 15 min. Area-under-the-curve (AUC) images were calculated using the DGE images. AUC_2-7min values of the glioma core, margin area, edema area, and contralateral brain parenchyma were compared using Mann-Whitney U tests. Overall, gray and white matter areas in the AUC images showed relatively low DGE signal change and bilateral symmetry. However, the tumor cores displayed a significant hyperintensity. A high DGE signal change was also seen in the necrotic, cystic, and cerebrospinal areas. These results show that DGE MRI is a feasible technique for the study of brain tumors as part of a clinical exam. Importantly, DGE MRI showed enhancement in areas confirmed histopathologically as tumors, whereas Gd T1w MRI did not show any enhancement in this area. Since the D-glucose molecule is smaller than Gd-based contrast agents, DGE MRI may be more sensitive to subtle blood-brain barrier disruptions, thus potentially providing early information about possible malignancy. These findings provide a new perspective for the further exploration and analysis of D-glucose uptake in brain tumors.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":" ","pages":"e5265"},"PeriodicalIF":2.7,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11604297/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142582923","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}