Molecular Therapy. Nucleic Acids最新文献

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How well does the adaptive feature representation learning approach identify human mRNA N4-acetylcytidine sites? 自适应特征表征学习法识别人类 mRNA N4-乙酰胞嘧啶位点的效果如何?
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-29 DOI: 10.1016/j.omtn.2024.102300
Rahul Kumar, Yanfeng Wang, Sandeep Kumar Dhanda
{"title":"How well does the adaptive feature representation learning approach identify human mRNA N4-acetylcytidine sites?","authors":"Rahul Kumar, Yanfeng Wang, Sandeep Kumar Dhanda","doi":"10.1016/j.omtn.2024.102300","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102300","url":null,"abstract":"","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"92 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222591","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advancing gene editing by engineering miniature CRISPR-Cas Un1Cas12f1 通过微型 CRISPR-Cas Un1Cas12f1 工程推进基因编辑工作
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-29 DOI: 10.1016/j.omtn.2024.102302
Weimin Tang
{"title":"Advancing gene editing by engineering miniature CRISPR-Cas Un1Cas12f1","authors":"Weimin Tang","doi":"10.1016/j.omtn.2024.102302","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102302","url":null,"abstract":"","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"7 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Metabolism of tRNAs and rRNAs shape immunoactive signatures in chronic obstructive pulmonary disease and pulmonary infections tRNA 和 rRNA 的代谢形成慢性阻塞性肺病和肺部感染的免疫活性特征
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-29 DOI: 10.1016/j.omtn.2024.102298
Zhenyi Hong, Xavier Bofill-De Ros
{"title":"Metabolism of tRNAs and rRNAs shape immunoactive signatures in chronic obstructive pulmonary disease and pulmonary infections","authors":"Zhenyi Hong, Xavier Bofill-De Ros","doi":"10.1016/j.omtn.2024.102298","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102298","url":null,"abstract":"","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"60 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222586","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Breaking bad aggregates: How a DNA aptamer cleans up Parkinson’s disease 打破不良聚集:DNA 合酶如何清除帕金森病
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-29 DOI: 10.1016/j.omtn.2024.102296
Maxim V. Berezovski
{"title":"Breaking bad aggregates: How a DNA aptamer cleans up Parkinson’s disease","authors":"Maxim V. Berezovski","doi":"10.1016/j.omtn.2024.102296","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102296","url":null,"abstract":"","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"437 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222587","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Stereopure ASOs: An unanticipated increase in selectivity for targeting mutant HTT 立体纯ASOs:针对突变型 HTT 的选择性意外提高
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-28 DOI: 10.1016/j.omtn.2024.102312
Vijay N. Gulumkar, Steven F. Dowdy
{"title":"Stereopure ASOs: An unanticipated increase in selectivity for targeting mutant HTT","authors":"Vijay N. Gulumkar, Steven F. Dowdy","doi":"10.1016/j.omtn.2024.102312","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102312","url":null,"abstract":"","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"31 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142227590","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Targeting heterozygous dominant negative variant of KCNA2 using Gapmer ASO for the treatment of drug-resistant epilepsy 利用 Gapmer ASO 靶向 KCNA2 的杂合显性负变异,治疗耐药性癫痫
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-27 DOI: 10.1016/j.omtn.2024.102316
Hua Huang, Dong Rui Ma, Derrick Wei Shih Chan, Adeline Seow Fen Ngoh, Dejie Yu, Shi Jun Ng, John Jia En Chua, Eng King Tan, Hui-Lin Chin, Denise Li Meng Goh, Tuck Wah Soong
{"title":"Targeting heterozygous dominant negative variant of KCNA2 using Gapmer ASO for the treatment of drug-resistant epilepsy","authors":"Hua Huang, Dong Rui Ma, Derrick Wei Shih Chan, Adeline Seow Fen Ngoh, Dejie Yu, Shi Jun Ng, John Jia En Chua, Eng King Tan, Hui-Lin Chin, Denise Li Meng Goh, Tuck Wah Soong","doi":"10.1016/j.omtn.2024.102316","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102316","url":null,"abstract":"A missense mutation c.1220C>G of gene was recently identified in an infant with epilepsy. encodes K1.2 subunits that form voltage-gated potassium channels (VGKC) via tetrameric assembly. The mutation results in amino acid change P407R at the highly conserved motif. Functional characterization revealed that mutant K1.2_P407R subunits formed loss-of-function channels and suppressed both K1.2 and K1.1 channel activities. Hetero-tetrameric assembly of the K1.2_P407R subunits with other neuronal voltage-gated potassium channels of Shaker subfamily could lead to general deficit of repolarizing potassium current and potentially underlie the enhanced seizure susceptibility. Indeed, expression of human K1.2_P407R in early postnatal rat cortical neurons or genetically engineered hESC-derived neurons disclosed broadening of action potential duration and early afterdepolarization (EAD), associating with reduced potassium current. We hypothesize that Gapmer antisense oligonucleotides (ASOs) targeted to c.1220C>G mutation will selectively degrade the mutant mRNA while allowing the remaining wild-type (WT) subunits to form functional channels. As a proof of principle, delivery of Gapmer packaged in lipid nanoparticle into cortical neurons selectively suppressed K1.2_P407R over the WT protein expression, reversing the broadening of action potential duration, abrogating the EAD and leading to overall increase in potassium current.","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"43 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222590","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The role of RNA modifications in disease-associated macrophages RNA 修饰在疾病相关巨噬细胞中的作用
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-26 DOI: 10.1016/j.omtn.2024.102315
Camille Huart, Mayuk Saibal Gupta, Jo A. Van Ginderachter
{"title":"The role of RNA modifications in disease-associated macrophages","authors":"Camille Huart, Mayuk Saibal Gupta, Jo A. Van Ginderachter","doi":"10.1016/j.omtn.2024.102315","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102315","url":null,"abstract":"In recent years, the field of epitranscriptomics has witnessed significant breakthroughs with the identification of more than 150 different chemical modifications in different RNA species. It has become increasingly clear that these chemical modifications play an important role in the regulation of fundamental processes linked to cell fate and development. Further interest was sparked by the ability of the epitranscriptome to regulate pathogenesis. However, despite the involvement of macrophages in a multitude of diseases, a clear knowledge gap exists in the understanding of how RNA modifications regulate the phenotype of these cells. Here, we provide a comprehensive overview of the known roles of macrophage RNA modifications in the context of different diseases.","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"10 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222592","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Less is more: Allele-specific removal of dysfunctional RYR1 channel subunits 少即是多:等位基因特异性清除功能失调的 RYR1 通道亚基
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-26 DOI: 10.1016/j.omtn.2024.102301
Derek Sun, William R. Lagor
{"title":"Less is more: Allele-specific removal of dysfunctional RYR1 channel subunits","authors":"Derek Sun, William R. Lagor","doi":"10.1016/j.omtn.2024.102301","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102301","url":null,"abstract":"","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"112 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Simple improvements in vector design afford substantial gains in AAV delivery of aggregation-slowing Aβ variants 载体设计的简单改进就能大幅提高 AAV 释放聚集减缓型 Aβ 变体的能力
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-26 DOI: 10.1016/j.omtn.2024.102314
Ella Borgenheimer, Cameron Trueblood, Bryan L. Nguyen, William R. Lagor, Joanna L. Jankowsky
{"title":"Simple improvements in vector design afford substantial gains in AAV delivery of aggregation-slowing Aβ variants","authors":"Ella Borgenheimer, Cameron Trueblood, Bryan L. Nguyen, William R. Lagor, Joanna L. Jankowsky","doi":"10.1016/j.omtn.2024.102314","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102314","url":null,"abstract":"Adeno-associated virus (AAV) gene therapy for neurological disease has gained traction due to stunning advances in capsid evolution for CNS targeting. With AAV brain delivery now in focus, conventional improvements in viral expression vectors offer a complementary route for optimizing gene delivery. We previously introduced a novel AAV gene therapy to slow amyloid aggregation in the brain based on neuronal release of an Aβ sequence variant that inhibited fibrilization of wild-type Aβ. Here we explore three coding elements of the virally delivered DNA plasmid in an effort to maximize the production of therapeutic peptide in the brain. We demonstrate that simply replacing the Gaussia luciferase signal peptide with the mouse immunoglobulin heavy chain signal peptide increased release of variant Aβ by ∼5-fold. Sequence modifications within the expressed minigene further increased peptide release by promoting γ-secretase cleavage. Addition of a cytosolic fusion tag compatible with γ-secretase interaction allowed viral transduction to be tracked by immunostaining, independent from the variant Aβ peptide. Collectively these construct modifications increased neuronal production of therapeutic peptide by 10-fold upon intracranial AAV injection of neonatal mice. These findings demonstrate that modest changes in expression vector design can yield substantial gains in AAV efficiency for therapeutic applications.","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"22 1","pages":""},"PeriodicalIF":8.8,"publicationDate":"2024-08-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222593","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Topical DNA aptamer therapeutics for the skin 用于皮肤的局部 DNA 类似物疗法
IF 8.8 2区 医学
Molecular Therapy. Nucleic Acids Pub Date : 2024-08-23 DOI: 10.1016/j.omtn.2024.102299
Simon C.C. Shiu, Andrew B. Kinghorn, Julian A. Tanner
{"title":"Topical DNA aptamer therapeutics for the skin","authors":"Simon C.C. Shiu, Andrew B. Kinghorn, Julian A. Tanner","doi":"10.1016/j.omtn.2024.102299","DOIUrl":"https://doi.org/10.1016/j.omtn.2024.102299","url":null,"abstract":"","PeriodicalId":18821,"journal":{"name":"Molecular Therapy. Nucleic Acids","volume":"22 1","pages":"102299"},"PeriodicalIF":8.8,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142222595","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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