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Protracted oxygenation across the Cambrian–Ordovician transition: A key initiator of the Great Ordovician Biodiversification Event? 寒武纪-奥陶系过渡时期的长期氧化作用:奥陶系生物多样性大事件的关键发起者?
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-01-26 DOI: 10.1111/gbi.12545
Nevin P. Kozik, Seth A. Young, Anders Lindskog, Per Ahlberg, Jeremy D. Owens
{"title":"Protracted oxygenation across the Cambrian–Ordovician transition: A key initiator of the Great Ordovician Biodiversification Event?","authors":"Nevin P. Kozik,&nbsp;Seth A. Young,&nbsp;Anders Lindskog,&nbsp;Per Ahlberg,&nbsp;Jeremy D. Owens","doi":"10.1111/gbi.12545","DOIUrl":"https://doi.org/10.1111/gbi.12545","url":null,"abstract":"<p>Fluctuations in marine oxygen concentrations have been invoked as a primary driver for changes in biodiversity throughout Earth history. Expansions in reducing marine conditions are commonly invoked as key causal mechanisms for mass extinctions, while increases in marine oxygenation are becoming an increasingly common causal mechanism invoked for biodiversification events. Here we utilize a multiproxy approach to constrain local and global marine paleoredox conditions throughout the late Cambrian–Early Ordovician from two drill core successions in Baltoscandia. Local paleoredox proxies such as manganese concentrations and iron speciation reveal that both sites in the Baltic paleobasin had persistently anoxic and predominantly euxinic (anoxic and sulfidic) bottom water conditions throughout the study interval. Corresponding trace metal datasets indicate nuanced contraction and expansion of global anoxic and euxinic conditions along continental margins during the late Cambrian–Early Ordovician. Lastly, thallium isotope data from these locally reducing sections suggest a global expansion of oxygenated shelf and deeper marine environments from the late Cambrian into the Early Ordovician. This evidence for increasingly oxic marine environments coincides with increases in burrowing depth and tiering in marine animals, as well as diversification of body fossils throughout this ~8-million-year interval. The collective geochemical datasets provide some of the first direct paleoredox evidence for an increase in marine oxygen concentrations as a key mechanism for the Ordovician radiation of marine life.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"323-340"},"PeriodicalIF":3.7,"publicationDate":"2023-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5816619","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Organic preservation of vase-shaped microfossils from the late Tonian Chuar Group, Grand Canyon, Arizona, USA 美国亚利桑那州大峡谷Tonian Chuar群晚期花瓶状微化石的有机保存
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-01-18 DOI: 10.1111/gbi.12544
Kelly E. Tingle, Susannah M. Porter, Morgan R. Raven, Andrew D. Czaja, Samuel M. Webb, Bonnie Bloeser
{"title":"Organic preservation of vase-shaped microfossils from the late Tonian Chuar Group, Grand Canyon, Arizona, USA","authors":"Kelly E. Tingle,&nbsp;Susannah M. Porter,&nbsp;Morgan R. Raven,&nbsp;Andrew D. Czaja,&nbsp;Samuel M. Webb,&nbsp;Bonnie Bloeser","doi":"10.1111/gbi.12544","DOIUrl":"https://doi.org/10.1111/gbi.12544","url":null,"abstract":"<p>Vase-shaped microfossils (VSMs) are found globally in middle Neoproterozoic (800–730 Ma) marine strata and represent the earliest evidence for testate (shell-forming) amoebozoans. VSM tests are hypothesized to have been originally organic in life but are most commonly preserved as secondary mineralized casts and molds. A few reports, however, suggest possible organic preservation. Here, we test the hypothesis that VSMs from shales of the lower Walcott Member of the Chuar Group, Grand Canyon, Arizona, contain original organic material, as reported by B. Bloeser in her pioneering studies of Chuar VSMs. We identified VSMs from two thin section samples of Walcott Member black shales in transmitted light microscopy and used scanning electron microscopy to image VSMs. Carbonaceous material is found within the internal cavity of all VSM tests from both samples and is interpreted as bitumen mobilized from Walcott shales likely during the Cretaceous. Energy dispersive X-ray spectroscopy (EDS) and wavelength dispersive X-ray spectroscopy (WDS) reveal that VSM test walls contain mostly carbon, iron, and sulfur, while silica is present only in the surrounding matrix. Raman spectroscopy was used to compare the thermal maturity of carbonaceous material within the samples and indicated the presence of pyrite and jarosite within fossil material. X-ray absorption spectroscopy revealed the presence of reduced organic sulfur species within the carbonaceous test walls, the carbonaceous material found within test cavities, and in the sedimentary matrix, suggesting that organic matter sulfurization occurred within the Walcott shales. Our suite of spectroscopic analyses reveals that Walcott VSM test walls are organic and sometimes secondarily pyritized (with the pyrite variably oxidized to jarosite). Both preservation modes can occur at a millimeter spatial scale within sample material, and at times even within a single specimen. We propose that sulfurization within the Walcott Shales promoted organic preservation, and furthermore, the ratio of iron to labile VSM organic material controlled the extent of pyrite replacement. Based on our evidence, we conclude that the VSMs are preserved with original organic test material, and speculate that organic VSMs may often go unrecognized, given their light-colored, translucent appearance in transmitted light.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"290-309"},"PeriodicalIF":3.7,"publicationDate":"2023-01-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12544","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5744747","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Iron-mediated anaerobic ammonium oxidation recorded in the early Archean ferruginous ocean 记录于太古宙早期含铁海洋中的铁介导厌氧氨氧化
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-01-13 DOI: 10.1111/gbi.12540
Alice Pellerin, Christophe Thomazo, Magali Ader, Johanna Marin-Carbonne, Julien Alleon, Emmanuelle Vennin, Axel Hofmann
{"title":"Iron-mediated anaerobic ammonium oxidation recorded in the early Archean ferruginous ocean","authors":"Alice Pellerin,&nbsp;Christophe Thomazo,&nbsp;Magali Ader,&nbsp;Johanna Marin-Carbonne,&nbsp;Julien Alleon,&nbsp;Emmanuelle Vennin,&nbsp;Axel Hofmann","doi":"10.1111/gbi.12540","DOIUrl":"https://doi.org/10.1111/gbi.12540","url":null,"abstract":"<p>The nitrogen isotopic composition of organic matter is controlled by metabolic activity and redox speciation and has therefore largely been used to uncover the early evolution of life and ocean oxygenation. Specifically, positive δ<sup>15</sup>N values found in well-preserved sedimentary rocks are often interpreted as reflecting the stability of a nitrate pool sustained by water column partial oxygenation. This study adds much-needed data to the sparse Paleoarchean record, providing carbon and nitrogen concentrations and isotopic compositions for more than fifty samples from the 3.4 Ga Buck Reef Chert sedimentary deposit (BRC, Barberton Greenstone Belt). In the overall anoxic and ferruginous conditions of the BRC depositional environment, these samples yield positive δ<sup>15</sup>N values up to +6.1‰. We argue that without a stable pool of nitrates, these values are best explained by non-quantitative oxidation of ammonium via the Feammox pathway, a metabolic co-cycling between iron and nitrogen through the oxidation of ammonium in the presence of iron oxides. Our data contribute to the understanding of how the nitrogen cycle operated under reducing, anoxic, and ferruginous conditions, which are relevant to most of the Archean. Most importantly, they invite to carefully consider the meaning of positive δ<sup>15</sup>N signatures in Archean sediments.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"277-289"},"PeriodicalIF":3.7,"publicationDate":"2023-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12540","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6211434","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of RuBisCO and CO2 concentration on cyanobacterial growth and carbon isotope fractionation RuBisCO和CO2浓度对蓝藻生长和碳同位素分馏的影响
IF 3.7 2区 地球科学
Geobiology Pub Date : 2023-01-05 DOI: 10.1111/gbi.12543
Amanda K. Garcia, Mateusz K?dzior, Arnaud Taton, Meng Li, Jodi N. Young, Betül Ka?ar
{"title":"Effects of RuBisCO and CO2 concentration on cyanobacterial growth and carbon isotope fractionation","authors":"Amanda K. Garcia,&nbsp;Mateusz K?dzior,&nbsp;Arnaud Taton,&nbsp;Meng Li,&nbsp;Jodi N. Young,&nbsp;Betül Ka?ar","doi":"10.1111/gbi.12543","DOIUrl":"https://doi.org/10.1111/gbi.12543","url":null,"abstract":"<p>Carbon isotope biosignatures preserved in the Precambrian geologic record are primarily interpreted to reflect ancient cyanobacterial carbon fixation catalyzed by Form I RuBisCO enzymes. The average range of isotopic biosignatures generally follows that produced by extant cyanobacteria. However, this observation is difficult to reconcile with several environmental (e.g., temperature, pH, and CO<sub>2</sub> concentrations), molecular, and physiological factors that likely would have differed during the Precambrian and can produce fractionation variability in contemporary organisms that meets or exceeds that observed in the geologic record. To test a specific range of genetic and environmental factors that may impact ancient carbon isotope biosignatures, we engineered a mutant strain of the model cyanobacterium <i>Synechococcus elongatus</i> PCC 7942 that overexpresses RuBisCO across varying atmospheric CO<sub>2</sub> concentrations. We hypothesized that changes in RuBisCO expression would impact the net rates of intracellular CO<sub>2</sub> fixation versus CO<sub>2</sub> supply, and thus whole-cell carbon isotope discrimination. In particular, we investigated the impacts of RuBisCO overexpression under changing CO<sub>2</sub> concentrations on both carbon isotope biosignatures and cyanobacterial physiology, including cell growth and oxygen evolution rates. We found that an increased pool of active RuBisCO does not significantly affect the <sup>13</sup>C/<sup>12</sup>C isotopic discrimination (ε<sub>p</sub>) at all tested CO<sub>2</sub> concentrations, yielding ε<sub>p</sub> of ≈ 23‰ for both wild-type and mutant strains at elevated CO<sub>2</sub>. We therefore suggest that expected variation in cyanobacterial RuBisCO expression patterns should not confound carbon isotope biosignature interpretation. A deeper understanding of environmental, evolutionary, and intracellular factors that impact cyanobacterial physiology and isotope discrimination is crucial for reconciling microbially driven carbon biosignatures with those preserved in the geologic record.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"390-403"},"PeriodicalIF":3.7,"publicationDate":"2023-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12543","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6134584","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Multiple sulphur isotope record of Paleoarchean sedimentary rocks across the Onverwacht Group, Barberton Greenstone Belt, South Africa 南非Barberton绿岩带Onverwacht群古太古代沉积岩的多重硫同位素记录
IF 3.7 2区 地球科学
Geobiology Pub Date : 2022-12-26 DOI: 10.1111/gbi.12542
Eugene G. Grosch, Nicola McLoughlin, Martin Whitehouse
{"title":"Multiple sulphur isotope record of Paleoarchean sedimentary rocks across the Onverwacht Group, Barberton Greenstone Belt, South Africa","authors":"Eugene G. Grosch,&nbsp;Nicola McLoughlin,&nbsp;Martin Whitehouse","doi":"10.1111/gbi.12542","DOIUrl":"https://doi.org/10.1111/gbi.12542","url":null,"abstract":"<p>This study presents multiple sulphur isotope (<sup>32</sup>S, <sup>33</sup>S, <sup>34</sup>S, <sup>36</sup>S) data on pyrites from silicified volcano-sedimentary rocks of the Paleoarchean Onverwacht Group of the Barberton greenstone belt, South Africa. These rocks include seafloor cherts and felsic conglomerates that were deposited in shallow marine environments preserving a record of atmospheric and biogeochemical conditions on the early Earth. A strong variation in mass independent sulphur isotope fractionation (MIF-S) anomalies is found in the cherts, with Δ<sup>33</sup>S ranging between −0.26‰ and 3.42‰. We explore possible depositional and preservational factors that could explain some of this variation seen in MIF-S. Evidence for microbial activity is recorded by the c. 3.45 Ga Hooggenoeg Formation Chert (HC4) preserving a contribution of microbial sulphate reduction (−Δ<sup>33</sup>S and –δ<sup>34</sup>S), and a c. 3.33 Ga Kromberg Formation Chert (KC5) recording a possible contribution of microbial elemental sulphur disproportionation (+Δ<sup>33</sup>S and –δ<sup>34</sup>S). Pyrites from a rhyo-dacitic conglomerate of the Noisy Formation do not plot along a previously proposed global Felsic Volcanic Array, and this excludes short-lived pulses of intense felsic volcanic gas emissions as the dominant control on Archean MIF-S. Rather, we suggest that the MIF-S signals measured reflect dilution during marine deposition, early diagenetic modification, and mixing with volcanic/hydrothermal S sources. Given the expanded stratigraphic interval (3.47–3.22 Ga) now sampled from across the Barberton Supergroup, we conclude that large MIF-S exceeding &gt;4‰ is atypical of Paleoarchean near-surface environments on the Kaapvaal Craton.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 2","pages":"153-167"},"PeriodicalIF":3.7,"publicationDate":"2022-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6050684","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Carbon pump dynamics and limited organic carbon burial during OAE1a 碳泵动力学与OAE1a期有限有机碳埋藏
IF 3.7 2区 地球科学
Geobiology Pub Date : 2022-12-25 DOI: 10.1111/gbi.12538
Kohen W. Bauer, N. Ryan McKenzie, Cinzia Bottini, Elisabetta Erba, Sean A. Crowe
{"title":"Carbon pump dynamics and limited organic carbon burial during OAE1a","authors":"Kohen W. Bauer,&nbsp;N. Ryan McKenzie,&nbsp;Cinzia Bottini,&nbsp;Elisabetta Erba,&nbsp;Sean A. Crowe","doi":"10.1111/gbi.12538","DOIUrl":"https://doi.org/10.1111/gbi.12538","url":null,"abstract":"<p>Oceanic Anoxic Events (OAEs) are conspicuous intervals in the geologic record that are associated with the deposition of organic carbon (OC)-rich marine sediment, linked to extreme biogeochemical perturbations, and characterized by widespread ocean deoxygenation. Mechanistic links between the marine biological carbon pump (BCP), redox conditions, and organic carbon burial during OAEs, however, remain poorly constrained. In this work we reconstructed the BCP in the western Tethys Ocean across OAE1a (~120 Mya) using sediment geochemistry and OC mass accumulation rates (<i>OC</i><sub><i>Acc</i></sub>). We find that <i>OC</i><sub><i>Acc</i></sub> were between 0.006 and 3.3 gC m<sup>−2</sup> yr<sup>−1</sup>, with a mean value of 0.79 ± 0.78 SD gC m<sup>−2</sup> yr<sup>−1</sup>—these rates are low and comparable to oligotrophic regions in the modern oceans. This challenges longstanding assumptions that oceanic anoxic events are intervals of strongly elevated organic carbon burial. Numerical modelling of the BCP, furthermore, reveals that such low OC fluxes are only possible with either or both low to moderate OC export fluxes from ocean surface waters, with rates similar to oligotrophic (nutrient-poor, &lt;30 gC m<sup>−2</sup> yr<sup>−1</sup>) and mesotrophic (moderate-nutrients, ~50–100 gC m<sup>−2</sup> yr<sup>−1</sup>) regions in the modern ocean, and stronger than modern vertical OC attenuation. The low OC fluxes thus reflect a relatively weak BCP. Low to moderate productivity is further supported by palaeoecological and geochemical evidence and was likely maintained through nutrient limitation that developed in response to the burial and sequestration of phosphorus in association with iron minerals under ferruginous (anoxic iron-rich) ocean conditions. Without persistently high productivity, ocean deoxygenation during OAE1a was more likely driven by other physicochemical and biological factors including ocean warming, changes in marine primary producer community composition, and fundamental shifts in the efficiency of the BCP with associated effects and feedbacks.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"341-354"},"PeriodicalIF":3.7,"publicationDate":"2022-12-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6035498","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Nickel and zinc micronutrient availability in Phanerozoic oceans 显生宙海洋中微量元素镍和锌的有效性
IF 3.7 2区 地球科学
Geobiology Pub Date : 2022-12-19 DOI: 10.1111/gbi.12541
Tim C. Sweere, Alexander J. Dickson, Derek Vance
{"title":"Nickel and zinc micronutrient availability in Phanerozoic oceans","authors":"Tim C. Sweere,&nbsp;Alexander J. Dickson,&nbsp;Derek Vance","doi":"10.1111/gbi.12541","DOIUrl":"https://doi.org/10.1111/gbi.12541","url":null,"abstract":"<p>Nickel and zinc are both bio-essential micronutrients with a nutrient-like distribution in the modern ocean, but show key differences in their biological functions and geochemical behavior. Eukaryotic phytoplankton, and especially diatoms, have high Zn quotas, whereas cyanobacteria generally require relatively more Ni. Secular changes in the relative availability of these micronutrients may, therefore, have affected the evolution and diversification of phytoplankton. In this study, we use a large compilation of Ni and Zn concentration data for Phanerozoic sediments to evaluate long-term changes in Ni and Zn availability and possible links to phytoplankton evolution. Modern data suggest that organic-rich sediments capture the dissolved deep ocean Ni/Zn ratio, regardless of local depositional conditions. We use this observation to constrain Ni/Zn ratios for past oceans, based on data from the sedimentary record. This record highlights long-term changes in the relative availability of these micronutrients that can be linked to the (bio)geochemical conditions on the Earth's surface. Early Palaeozoic oceans were likely relatively Ni rich, with sedimentary Ni/Zn ratios for this interval mostly being around ~1 or higher. A comparison with Phanerozoic strontium-, carbon-, and sulfur-isotopic records suggests that the late Palaeozoic decrease in sulfidic conditions and increase in hydrothermal inputs and organic-carbon burial rates caused a shift towards more Zn-rich conditions. Mesozoic and Cenozoic sediments show relatively Zn-rich oceans for these time intervals, with sedimentary Ni/Zn ratios mostly being around ~1 or lower. These observations imply that the diversification of the dominant groups of modern eukaryotic phytoplankton occurred in relatively Zn-rich oceans and that these organisms still carry this signature in their stoichiometries. However, the Phanerozoic transition to a more Zn-rich ocean pre-dates the origin and diversification of modern eukaryotes and, therefore, this transition was likely not the main direct cause for eukaryotic diversification in the Mesozoic and Cenozoic Eras.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"310-322"},"PeriodicalIF":3.7,"publicationDate":"2022-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12541","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5724619","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
The diagenetic fate of collagen as revealed by analytical pyrolysis of fossil fish scales from deep time 深层鱼鳞分析热解揭示了胶原蛋白的成岩命运
IF 3.7 2区 地球科学
Geobiology Pub Date : 2022-12-18 DOI: 10.1111/gbi.12537
Raman Umamaheswaran, Suryendu Dutta, Guntupalli V. R. Prasad, Mahasin Ali Khan, Sumit Kumar, Subir Bera, Rajeev Patnaik
{"title":"The diagenetic fate of collagen as revealed by analytical pyrolysis of fossil fish scales from deep time","authors":"Raman Umamaheswaran,&nbsp;Suryendu Dutta,&nbsp;Guntupalli V. R. Prasad,&nbsp;Mahasin Ali Khan,&nbsp;Sumit Kumar,&nbsp;Subir Bera,&nbsp;Rajeev Patnaik","doi":"10.1111/gbi.12537","DOIUrl":"https://doi.org/10.1111/gbi.12537","url":null,"abstract":"<p>The mechanism of protein degradation has remained a topic of debate (specifically concerning their preservation in deep time), which has recently been invigorated due to multiple published reports of preservation ranging from Miocene to the Triassic that potentially challenge the convention that protein preservation beyond the Cenozoic is extremely uncommon or is expected to be absent altogether, and thus have attracted skepticism. In this paper, we analyze fossil fish scales from the Cretaceous, Jurassic, and Triassic using comprehensive pyrolysis gas chromatography coupled with time-of-flight mass spectrometry and compare the pyrolytic products so obtained with a well-preserved fish scale from Late Pliocene, in an attempt to better understand the effects of diagenesis on protein degradation at the molecular level through deep time. We find that the Pliocene fish scale displays a large number of N-bearing pyrolytic products, including abundant substituted cyclic 2,5-diketopiperazines (2,5-DKPs) which are diagnostic products of peptide and amino acid pyrolysis. We identify N-bearing compounds in the Mesozoic fish scales—however, among the 2,5-DKPs that were identified in the Pliocene scale, only diketodipyrrole (or cyclo (Pyr-Pyr)) is present in the Mesozoic scales. We discuss the implications of N-bearing pyrolytic products with emphasis on 2,5-DKPs in geological samples and conclude that the discrepancy in abundance and variety of N-bearing products between Pliocene and Mesozoic scales indicates that the protein component in the latter has been extensively diagenetically altered, while a suite of DKPs such as in the former would imply stronger evidence to indicate preservation of protein. We conclude that analytical pyrolysis is an effective tool for detecting preservation of intact proteins, as well as for providing insights into their degradation mechanisms, and can potentially be utilized to assign proteinaceous origin to a fossil sample of unknown affinity.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"378-389"},"PeriodicalIF":3.7,"publicationDate":"2022-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5711031","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Microbial biosignatures in ancient deep-sea hydrothermal sulfides 古深海热液硫化物的微生物特征
IF 3.7 2区 地球科学
Geobiology Pub Date : 2022-12-16 DOI: 10.1111/gbi.12539
Eric Alexander Runge, Muammar Mansor, Andreas Kappler, Jan-Peter Duda
{"title":"Microbial biosignatures in ancient deep-sea hydrothermal sulfides","authors":"Eric Alexander Runge,&nbsp;Muammar Mansor,&nbsp;Andreas Kappler,&nbsp;Jan-Peter Duda","doi":"10.1111/gbi.12539","DOIUrl":"https://doi.org/10.1111/gbi.12539","url":null,"abstract":"<p>Deep-sea hydrothermal systems provide ideal conditions for prebiotic reactions and ancient metabolic pathways and, therefore, might have played a pivotal role in the emergence of life. To understand this role better, it is paramount to examine fundamental interactions between hydrothermal processes, non-living matter, and microbial life in deep time. However, the distribution and diversity of microbial communities in ancient deep-sea hydrothermal systems are still poorly constrained, so evolutionary, and ecological relationships remain unclear. One important reason is an insufficient understanding of the formation of diagnostic microbial biosignatures in such settings and their preservation through geological time. This contribution centers around microbial biosignatures in Precambrian deep-sea hydrothermal sulfide deposits. Intending to provide a valuable resource for scientists from across the natural sciences whose research is concerned with the origins of life, we first introduce different types of biosignatures that can be preserved over geological timescales (rock fabrics and textures, microfossils, mineral precipitates, carbonaceous matter, trace metal, and isotope geochemical signatures). We then review selected reports of biosignatures from Precambrian deep-sea hydrothermal sulfide deposits and discuss their geobiological significance. Our survey highlights that Precambrian hydrothermal sulfide deposits potentially encode valuable information on environmental conditions, the presence and nature of microbial life, and the complex interactions between fluids, micro-organisms, and minerals. It further emphasizes that the geobiological interpretation of these records is challenging and requires the concerted application of analytical and experimental methods from various fields, including geology, mineralogy, geochemistry, and microbiology. Well-orchestrated multidisciplinary studies allow us to understand the formation and preservation of microbial biosignatures in deep-sea hydrothermal sulfide systems and thus help unravel the fundamental geobiology of ancient settings. This, in turn, is critical for reconstructing life's emergence and early evolution on Earth and the search for life elsewhere in the universe.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 3","pages":"355-377"},"PeriodicalIF":3.7,"publicationDate":"2022-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/gbi.12539","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"5682140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
A sedimentary record of the evolution of the global marine phosphorus cycle 全球海洋磷循环演化的沉积记录
IF 3.7 2区 地球科学
Geobiology Pub Date : 2022-12-05 DOI: 10.1111/gbi.12536
Noah J. Planavsky, Dan Asael, Alan D. Rooney, Leslie J. Robbins, Benjamin C. Gill, Carol M. Dehler, Devon B. Cole, Susannah M. Porter, Gordon D. Love, Kurt O. Konhauser, Christopher T. Reinhard
{"title":"A sedimentary record of the evolution of the global marine phosphorus cycle","authors":"Noah J. Planavsky,&nbsp;Dan Asael,&nbsp;Alan D. Rooney,&nbsp;Leslie J. Robbins,&nbsp;Benjamin C. Gill,&nbsp;Carol M. Dehler,&nbsp;Devon B. Cole,&nbsp;Susannah M. Porter,&nbsp;Gordon D. Love,&nbsp;Kurt O. Konhauser,&nbsp;Christopher T. Reinhard","doi":"10.1111/gbi.12536","DOIUrl":"https://doi.org/10.1111/gbi.12536","url":null,"abstract":"<p>Phosphorus (P) is typically considered to be the ultimate limiting nutrient for Earth's biosphere on geologic timescales. As P is monoisotopic, its sedimentary enrichment can provide some insights into how the marine P cycle has changed through time. A previous compilation of shale P enrichments argued for a significant change in P cycling during the Ediacaran Period (635–541 Ma). Here, using an updated P compilation—with more than twice the number of samples—we bolster the case that there was a significant transition in P cycling moving from the Precambrian into the Phanerozoic. However, our analysis suggests this state change may have occurred earlier than previously suggested. Specifically in the updated database, there is evidence for a transition ~35 million years before the onset of the Sturtian Snowball Earth glaciation in the Visingsö Group, potentially divorcing the climatic upheavals of the Neoproterozoic from changes in the Earth's P cycle. We attribute the transition in Earth's sedimentary P record to the onset of a more modern-like Earth system state characterized by less reducing marine conditions, higher marine P concentrations, and a greater predominance of eukaryotic organisms encompassing both primary producers and consumers. This view is consistent with organic biomarker evidence for a significant eukaryotic contribution to the preserved sedimentary organic matter in this succession and other contemporaneous Tonian marine sedimentary rocks. However, we stress that, even with an expanded dataset, we are likely far from pinpointing exactly when this transition occurred or whether Earth's history is characterized by a single or multiple transitions in the P cycle.</p>","PeriodicalId":173,"journal":{"name":"Geobiology","volume":"21 2","pages":"168-174"},"PeriodicalIF":3.7,"publicationDate":"2022-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"6099355","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
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