Journal of Physical Organic Chemistry最新文献

{"title":"The measurement of one-electron redox potentials of free radicals","authors":"Igor V. Khudyakov","doi":"10.1002/poc.4608","DOIUrl":"10.1002/poc.4608","url":null,"abstract":"<p>The paper is devoted to the measurements of one-electron redox potentials of transient free radicals E^o. These values can be measured in the reversible redox reactions of radicals under investigation with a reference pair, which E^o is known. Several E^o of transient radicals are presented. The convenient and important objects for E^o measurement are quinone/semiquinone radical-anions. A general problem of measurement of thermodynamic properties of short-lived transients is discussed.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 6","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-04-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140571181","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Computational studies on exothermic carbon–carbon bond cleavages","authors":"Athanassios Nicolaides,&nbsp;Hideo Tomioka","doi":"10.1002/poc.4606","DOIUrl":"10.1002/poc.4606","url":null,"abstract":"<p>Structural aspects of single C<span></span>C bond dissociation energies are examined and it is shown that in certain cases a negative bond dissociation energy (BDE) implies a very weak bond and an unstable species prone to bond breaking resulting in dissociation or structural rearrangement. It is proposed that, in such cases, a better quantitative indicator for the strength of the bond is the activation energy required for its fission. <i>o</i>-Phenelylene bis(nitrene) <b>1</b> is computed to have the most negative C<span></span>C BDE for an observable species. Under cryogenic conditions, activation energy for the dissociation of this bond has been measured as only 2.8 kcal/mol, making it the weakest that we know of. An explanation based on the formation of two new bonds as responsible for this extremely weak bond is given.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 6","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-03-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140317029","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Theoretical investigation of substituted end groups in thiophene-phenyl-thiophene (TPT) derivatives for high efficiency organic solar cells","authors":"Sonia Sadiq,&nbsp;Rasheed Ahmad Khera,&nbsp;Ahmed M. Tawfeek,&nbsp;Mahmoud A. A. Ibrahim,&nbsp;Faheem Abbas,&nbsp;Sajjad Ali,&nbsp;Ahmed Mahal,&nbsp;Duan Meitao,&nbsp;Muhammad Waqas","doi":"10.1002/poc.4607","DOIUrl":"10.1002/poc.4607","url":null,"abstract":"<p>The field of organic solar cells has witnessed notable advancements in the past few years, mostly due to the development of novel materials for the active layer. The current investigations reveal the potential of nine previously unexplored molecules (<b>TP1–TP9</b>) designed by end group modification of TPT4F molecule. These molecules were investigated at MPW1PW91/6-31G (d, p) with DFT and TD-DFT approach to study the various photovoltaic and geometrical parameters. The results obtained through computations indicated improvement in the investigated parameters. The terminal group modification shifted the absorption maximum towards longer wavelength in the UV-visible region. Highly conjugated modified acceptors reduced the band gap. The lower excitation energies increased the rate of charge transfer. The designed molecules showed improved excited state lifetime in comparison to the reference. The open circuit voltage was determined using the PTB7 polymer, which exhibited a noticeable improvement, especially in TP1 (1.70 eV), TP3 (1.75 eV), TP4 (1.68 eV), TP6 (1.85 eV), and TP7 (1.75 eV) when compared with reference (1.59 eV). Moreover, charge transfer investigations of designed molecules with PTB7 complex were performed by analyzing the concentration of charge transfer over molecular orbitals, that is, HOMO to LUMO. All of the preceding investigations targeted to achieve high-efficiency organic cells reveal that the altered molecules can be considered effective candidates to tackle future energy problems.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 6","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140154147","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"The curious case of the colored crystals of N-substituted 2-oxo-1,2-dihydropyridinyl-3-yl amines and amides: Self-association in the solid state","authors":"Wendy A. Loughlin,&nbsp;Ian D. Jenkins,&nbsp;Peter C. Healy,&nbsp;N. David Karis,&nbsp;Gregory K. Pierens","doi":"10.1002/poc.4603","DOIUrl":"10.1002/poc.4603","url":null,"abstract":"<p>During a previous investigation of pyridone derivatives as inhibitors of glycogen phosphorylase, we observed that some <i>N-</i>substituted 2-oxo-1,2-dihydropyridinyl-3-yl amines and amides exhibited different colors, ranging from red to green to blue to teal. Remarkably, one compound (compound <b>8</b>) could be crystallized in both a red form and a green form. To try to understand these observations, we have carried out further spectroscopic studies in the solid state and in solution employing UV-visible spectroscopy, NMR spectroscopy, and X-ray crystallography, along with molecular mechanics and DFT calculations on selected compounds. Evidence was obtained in the solid state for the self-association of pyridones into dimeric complexes or near-planar dimers induced by intermolecular hydrogen bonding and possible π-stacking, whereas monomeric structures for two compounds were proposed in chloroform, in agreement with the DFT calculated chemical shifts. In this study, it was determined that the colors observed could not be attributed to hydrogen bonding or possible π-bond stacking in the novel relatively unconjugated pyridone derivatives. A possible explanation for the colors is suggested: a contaminant formed by aerial oxidation of trace amounts of the 3-aminopyridone starting material. This result contrasts with existing literature reports of UV and fluorescence spectra, which indicated distinct coloration for conjugated 2-pyridone compounds. The spectroscopic results, including X-ray structural data for five pyridones, contribute to a deeper understanding of structural interactions in pyridone derivatives.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 5","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-02-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/poc.4603","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140007482","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Theoretical study on the kinetics and reaction mechanism involved in the reduction of quinone by 1-benzyl-1,4-dihydronicotinamide","authors":"Manuel E. Medina,&nbsp;Hugo A. Jiménez-Vazquez,&nbsp;Luis G. Zepeda-Vallejo,&nbsp;Ángel Trigos","doi":"10.1002/poc.4605","DOIUrl":"10.1002/poc.4605","url":null,"abstract":"<p>Although it is well known that coenzyme NAD(P)H is involved in anabolic and catabolic reactions in the living organism, there is still significant controversy over the reaction mechanism involved in this biochemical transformation. Thus, 1-benzyl-1,4-dihydronicotinamide was used as a NAD(P)H model in the reduction reaction of 1,4-benzoquinone (Q), 2,3,5,6-tetrachloro-1,4-benzoquinone, and 2,3-dicyano-1,4-benzoquinone in acetonitrile medium. The kinetic calculations support that formal hydride transfer is the main mechanism promoting Q reduction, while the two-step process dominates 2,3-dicyano-1,4-benzoquinone reduction. Interestingly, only the single-electron transfer mechanism takes place when 2,3,5,6-tetrachloro-1,4-benzoquinone is used, affording the corresponding semiquinone derivative as the main product. This mechanistic behavior is related to the presence or absence of electron-withdrawing groups in the quinones used. Furthermore, the kinetic study results showed that calculated reaction rate constants are in close agreement with experimental results. The results support that formal hydride transfer on the reduction reaction of Q by 1-benzyl-1,4-dihydronicotinamide in acetonitrile proceeds through a hydrogen coupled electron transfer mechanism. This theoretical analysis provides valuable knowledge that can be extrapolated to study the reduction of quinones performed by NADH and NADPH in physiological media.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 5","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139946536","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Photooxidation of organic compounds by mesoporous silica functionalized with rose bengal","authors":"Catiunaiara R. Bittencourt,&nbsp;Julia C. Gomes,&nbsp;Heitor A. G. Bazani,&nbsp;Adriana P. Gerola","doi":"10.1002/poc.4601","DOIUrl":"10.1002/poc.4601","url":null,"abstract":"<p>The reuse of waste and the use of renewable materials are of great environmental and economic interest. With that in mind, the synthesis of mesoporous silica can be performed using rice husk ash, which is an industrial waste generated in large quantities. This mesoporous material can be functionalized with photoactive molecules, enabling application in photocatalysis. In this work, we used mesoporous silica nanoparticles functionalized with rose bengal dye (RB) for photooxidation reactions of organic molecules, such as the antibiotic cefuroxime 1-acetoxyethyl ester (cefuroxime axetil). The characterization results showed the formation of one-dimensional channels with uniform size and two-dimensional hexagonal arrangement, with surface area and pore diameter of 230 m² g⁻¹ and 5 nm, respectively. The infrared and UV-Vis spectroscopy indicated the functionalization of silica with photoactive molecules. Finally, SBA-15/RB was applied for the photooxidation of ascorbic acid and antibiotic cefuroxime axetil under irradiation with green light, proving to be efficient for the degradation of cefuroxime axetil. Investigation of the reactive oxygen species involved in photodegradation showed that the photooxidation mechanism mainly involves singlet oxygen.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 7","pages":""},"PeriodicalIF":1.9,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139925506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Changes in mechanism and transition state structure for solvolysis reactions of ring substituted benzyl chlorides in aqueous solution","authors":"Paul E. Yeary,&nbsp;John P. Richard","doi":"10.1002/poc.4600","DOIUrl":"10.1002/poc.4600","url":null,"abstract":"<p>Rate and product data are reported for the solvolysis reactions of 27 mono, di [3,4] and tri [3,4,5] ring-substituted benzyl chlorides. The first order rate constant for solvolysis in 20% acetonitrile in water decrease from <i>k</i>_solv = 2.2 s⁻¹ for 4-methoxybenzyl chloride to 1.1 × 10⁻⁸ s⁻¹ for 3,4-dinitrobenzyl chloride. The product rate constant ratios <i>k</i>_MeOH/<i>k</i>_TFE for solvolysis in 70/27/3 (v/v/v) HOH/TFE/MeOH range from a minimum of <i>k</i>_MeOH/<i>k</i>_TFE = 8 to a maximum of 110. The rate data were fit to a four-parameter Hammett equation that separates the resonance (\u0000<span></span><math>\u0000 <msub>\u0000 <mi>ρ</mi>\u0000 <mi>r</mi>\u0000 </msub>\u0000 <msub>\u0000 <mi>σ</mi>\u0000 <mi>r</mi>\u0000 </msub></math>) and polar (\u0000<span></span><math>\u0000 <msub>\u0000 <mi>ρ</mi>\u0000 <mi>n</mi>\u0000 </msub>\u0000 <msub>\u0000 <mi>σ</mi>\u0000 <mi>n</mi>\u0000 </msub></math>) effects of the aromatic ring substituents on the reaction rate. Increases in the values of the Hammett reaction constants \u0000<span></span><math>\u0000 <msub>\u0000 <mi>ρ</mi>\u0000 <mi>r</mi>\u0000 </msub></math> and \u0000<span></span><math>\u0000 <msub>\u0000 <mi>ρ</mi>\u0000 <mi>n</mi>\u0000 </msub></math> are observed as the substituent constants \u0000<span></span><math>\u0000 <msub>\u0000 <mi>σ</mi>\u0000 <mi>r</mi>\u0000 </msub></math> or \u0000<span></span><math>\u0000 <msub>\u0000 <mi>σ</mi>\u0000 <mi>n</mi>\u0000 </msub></math> are increased. A sharp decrease in the product selectivity <i>k</i>_MeOH/<i>k</i>_TFE = 26 for stepwise solvolysis of 4-methoxybenzyl chloride is observed as electron-withdrawing <i>meta-</i>substituents are added to 4-methoxybenzyl ring due to a Hammond-effect on the position of the transition state for solvent addition to the substituted 4-methoxybenzyl carbocation reaction intermediates. Sharp increases in the selectivity <i>k</i>_MeOH/<i>k</i>_TFE are observed with decreasing reactivity of other 3,4,5-subsituted benzyl chlorides due to anti-Hammond shifts, on a two-dimensional More–O'Ferrall reaction coordinate diagram, in the position of the transition state for a concerted solvolysis reaction.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 7","pages":""},"PeriodicalIF":1.9,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139925508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Quantum chemical explanation and APT atomic charge index of substituent orienting effect proposed by DFT calculation and MO Theory","authors":"Hongchang Shi","doi":"10.1002/poc.4580","DOIUrl":"10.1002/poc.4580","url":null,"abstract":"<p>In organic chemistry textbooks, the electron resonance states are used to explain the orienting effect of benzene substituent. However, these resonance states do not exist in the C₆H₅-S + E⁺ electrophilic addition, so the resonance state discussions actually are meaningless. The density functional theory (DFT) calculation shows that the C₆H₅-S + E⁺ addition follows the transition state theory and needs to overcome a barrier. Benzene molecule C₆H₆ has two degenerate highest occupied molecular orbitals (HOMOs), but after becoming substituted benzenes, the two HOMOs split to HOMO and HOMO-1 with different orbital energies and electron distributions. It makes the addition barrier on two or three benzene ring carbons is low, and the addition rate is fast, but the barrier of other carbons is high, and the rate is slow. Therefore, substituent splits the two degenerate HOMOs of benzene molecule, which is the origin of substituent orienting effect. For the substituted benzenes with halogen group -X and electron-releasing group, their HOMO images alone can determine that the two types of substituents are the ortho- and para-orienting groups, but for the substituted benzenes with electron-withdrawing group, their HOMO alone cannot determine whether the substituent is a meta-orienting group. The study found that atomic polar tensor (APT) charges are a good judgment index of substituent orienting effect because based on its physic-chemical model, the charges represent the number of active electrons on the benzene ring carbons. The DFT calculation gives the APT charges of 19 mono-substituted and 12 di-substituted benzenes and some aromatic molecules. The APT charges can all correctly determine their orienting effects, showing that APT atomic charge from quantum theoretical calculation is a good substituent orienting index.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 6","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139777642","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Innovative and sustainable synthesis and structure of novel N-substituted hexahydroacridine derivatives","authors":"Nangagoundan Vinoth,&nbsp;Chinnasamy Kalaiarasi,&nbsp;Appaswami Lalitha","doi":"10.1002/poc.4604","DOIUrl":"10.1002/poc.4604","url":null,"abstract":"<p>An efficient and green synthesis of tetramethyl-10-(phenylamino)-3,4,6,7,9,10-hexahydroacridine-1,8(2<i>H</i>,5<i>H</i>)-dione derivatives has been achieved from various substituted aryl aldehydes, 5,5-dimethyl-3-(2-phenylhydrazinyl)cyclohex-2-enone and dimedone in aqueous ethanol medium. Environment-friendly reaction, excellent yields, operational simplicity and shorter reaction times are the significant features of the present protocol. All the synthesized compounds were characterized by various spectroscopic techniques and X-ray crystal diffraction studies.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 5","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139838512","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Recognition of histidines with a synthetic zinc amino-oxochlorin regioisomer via synergetic coordination and hydrogen bonding","authors":"Mio Yuasa,&nbsp;Nobuyuki Hara,&nbsp;Hitoshi Tamiaki","doi":"10.1002/poc.4602","DOIUrl":"10.1002/poc.4602","url":null,"abstract":"<p>Zinc 13-(<i>N</i>,<i>N</i>-diethylamino)methyl-3,3,7,8,12,17,18-heptaethyl-2-oxochlorin was prepared from 2,3,7,8,12,13,17,18-octaethylporphyrin via the regioselectively acid-catalyzed double dehydration of <i>cis</i>-12,13-diethyl-<i>cis</i>-12,13-dihydroxy-2-oxobacteriochlorin to the corresponding 12-ethyl-13-vinyl-2-oxochlorin. The synthetic zinc amino-oxochlorin was axially ligated with the imidazolyl group of <i>N</i>^α-protected histidines in chloroform, and concomitantly the amino group of the former was hydrogen-bonded with the carboxy group of the latter. The resulting two-point bonding supramolecules served as models for the complexes of chlorophylls with peptides in photosynthetic apparatuses including light-harvesting antennas and charge-separating reaction centers. A similar 1:1 complex was produced by the interaction of the zinc amino-chlorin with the related methionine possessing thioether and carboxylic acid moieties.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 4","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-01-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139656553","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}