{"title":"Better performances of benzene-based over thiophene-based aromatic anionic donors: Computational studies on metameric conformational selectivity and hyperpolarizability of organic inner salts","authors":"Sanyasi Sitha","doi":"10.1002/poc.4598","DOIUrl":"10.1002/poc.4598","url":null,"abstract":"<p>Earlier experimental works report the synthesis of zwitterions with anionic <i>p</i>-dicyanomethanide (coupled to benzene and thiophene) donors. In this report, four such zwitterions (two metameric pairs) are investigated using HF, B3LYP, CAM-B3LYP, HSE06, and ωB97xD methodologies. This work is focused on (1) <i>metameric</i> (<i>Reichardt's and Brooker's</i>) <i>induced conformational selectivity</i> (<i>twisted</i> vs. <i>planar</i>) and (2) <i>efficiency assessments of benzene-</i> versus <i>thiophene-based anionic donors</i>. These effects were found to have significant influences on many tensorial and nontensorial properties. For Reichardt's type, large twisting was observed for the benzene case and lower twisting for the thiophene case. Enhanced first hyperpolarizability were observed for Reichardt's type (257.2 × 10<sup>−30</sup> esu) than Brooker's type (67.2 × 10<sup>−30</sup> esu), thus indicating the former type to be more efficient (<i>approximately fourfold enhancement</i>) chromophore (<i>approximately seven-time enhancement</i> for <i>thiophene-based</i> systems). Similarly, between the benzene versus thiophene cases, enhanced hyperpolarizabilities were observed for the former (257.2 × 10<sup>−30</sup> esu) than the latter type (112.0 × 10<sup>−30</sup> esu), indicating the benzene type as more efficient (<i>more than twofold enhancement</i>) donor (<i>approximately four-time enhancement</i> for <i>Brooker's types</i>). The structure–property manipulations strategies investigated here can be used as valuable tools in the designing of efficient functional molecular materials for various fundamental applications.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 4","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-01-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/poc.4598","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139616457","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Retraction: Exploring the intermolecular interactions in carbon disulfide dimer: An ab initio study using an improved Lennard–Jones potential energy surface for physical insights","authors":"","doi":"10.1002/poc.4597","DOIUrl":"https://doi.org/10.1002/poc.4597","url":null,"abstract":"<p>Waqas Amber Gill<sup>1</sup> | Muhammad Usman Khan<sup>2</sup> | Zunaira Shafiq<sup>3</sup> | Muhammad Ramzan Saeed Ashraf Janjua<sup>3</sup></p><p>Gill, W. A., Khan, M. U., Shafiq, Z., Janjua, M. R. S. A., “Exploring the Intermolecular Interactions in Carbon Disulfide Dimer: An Ab Initio Study Using an Improved Lennard-Jones Potential Energy Surface for Physical Insights,” J Phys Org Chem 2023, https://doi.org/10.1002/poc.4548. The above article, published online on 05 June 2023 on Wiley Online Library (wileyonlinelibrary.com), has been retracted by agreement between the journal's Editor in Chief, Professor Rik Tykwinski, and John Wiley and Sons LLC. The journal's Editor-in-Chief was contacted by a third party who raised concerns about the article. An independent scientific expert evaluated the article and confirmed that significant problems exist with the data and conclusions of the work, and that it contains inadequate and/or inaccurate citations. As a result, the editors consider the article's conclusions to be unreliable.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 1","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-01-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/poc.4597","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139419667","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Sequence effects on the thermal cis–trans isomerization of side-chain stearate-containing azobenzene polymers","authors":"Md Sahanawaz, Manik Lal Maity, Krishna Gopal Goswami, Pintu Sar, Priyadarsi De, Subhajit Bandyopadhyay","doi":"10.1002/poc.4599","DOIUrl":"10.1002/poc.4599","url":null,"abstract":"<p>Photochromic azobenzenes undergo light-mediated <i>trans</i>–<i>cis</i> isomerization. The <i>cis</i> isomer reverts to the <i>trans</i> isomer thermally. To investigate the effect of different monomer sequences on the thermal stability of <i>cis</i>-azobenzene, a series of copolymers, namely, block, and random structures containing stearic acid and azobenzene moieties as their side chains have been synthesized through reversible addition–fragmentation chain transfer (RAFT) polymerization. In this study, we investigate the photoisomerization of the <i>trans</i> and <i>cis</i> forms of the polymers and also the thermal reversal of the <i>cis</i>-azobenzene photochromic systems. The isomerization data revealed significant differences in the isomerization timescales between the polymers and the corresponding monomer. It was observed that the local polarity around the azobenzene units within a polymer was significantly influenced by the chain segment depending on whether it was in the vicinity of the hydrophobic alkyl chains or other azobenzene units. This local environment of the azobenzene units regulates the stabilization of the transition states during the <i>cis–trans</i> thermal isomerization, consequently affecting the half-life of the <i>cis</i> isomer.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 4","pages":""},"PeriodicalIF":1.8,"publicationDate":"2024-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139444106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Daniel Yim, Young-Kwan Kim, Ji Hun Park, Hyungjun Kim
{"title":"Electronic structure of 1,3-diphenyl-2-azaallenyl radical cation","authors":"Daniel Yim, Young-Kwan Kim, Ji Hun Park, Hyungjun Kim","doi":"10.1002/poc.4590","DOIUrl":"10.1002/poc.4590","url":null,"abstract":"<p>Quantum chemical simulations were conducted to elucidate the electronic structure of the 2-azaallenyl radical cation, a key intermediate in several [3 + 2]-cycloadditions initiated by the oxidation of 2H-azirine. We propose one additional Lewis structure in resonance with the commonly accepted two Lewis structures for the model system of 1,3-diphenyl-2-azaallenyl radical cation, drawn from comprehensive theoretical data including molecular shape, bond order analysis, partial atomic charges, and spin densities. In addition to the ground state chemistry, the chemical structure of excited state species can be also understood with these three Lewis structures. Theoretical data imply that a newly suggested one mainly accounts for the ground state structure, and the excited state structure is better represented by the previously reported ones. Our claim is further bolstered by the prediction of the excited state geometries of the dicationic and neutral species. This research presents the extended set of Lewis structures for a better understanding electronic structure of 2-azaallenyl radical cation.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 4","pages":""},"PeriodicalIF":1.8,"publicationDate":"2023-12-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139065053","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Reaction mechanism of acetonitrile, olefins, and amines catalyzed by Ag2CO3: A DFT investigation","authors":"Bin Chen, Da-Gang Zhou, Li-Jun Yang","doi":"10.1002/poc.4594","DOIUrl":"10.1002/poc.4594","url":null,"abstract":"<p>The mechanism of Ag<sub>2</sub>CO<sub>3</sub>-catalyzed reactions of acetonitrile, olefins, and amines was investigated by using the M06-L-D3/6-311 + G(d,p) method and level, and solvation model based on solute electron density (SMD) model was applied to simulate the solvent effect. Calculations show that the Ag<sub>2</sub>CO<sub>3</sub> could achieve the Csp<sup>3</sup>-H activation by coordinating with the terminal nitrogen atom of CH<sub>3</sub>CN; then, the addition reaction happened between the obtained Ag-complex intermediate and olefin via the coordination of Ag and benzene ring; finally, the obtained radical intermediate continues to go through one single electron transfer (SET) process, addition reaction, and H-shift reaction to yield the final product. The computational results reveal that Fe<sup>3+</sup> cation would have assisted the SET process successfully and the path of direct addition with the amine is the optimal. Fukui function and dual descriptor can be used to predict the reactive sites, and electron spin density isosurface graphs can analyze the structures and reveal the substances.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 3","pages":""},"PeriodicalIF":1.8,"publicationDate":"2023-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139065010","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Meihua Zhao, Jun Cao, Jun Chen, Jiani Xu, Tingting Xiao, Peng Ma, Congming Ma
{"title":"One-pot synthesis, thermal analysis, and density functional theory study of methyl urotropine perchlorate","authors":"Meihua Zhao, Jun Cao, Jun Chen, Jiani Xu, Tingting Xiao, Peng Ma, Congming Ma","doi":"10.1002/poc.4595","DOIUrl":"10.1002/poc.4595","url":null,"abstract":"<p>An energetic material methyl urotropine perchlorate (MUTP) was synthesized from urotropine, perchloric acid, and triethylenediamine. The single crystal structure of the energetic salt was characterized by X-ray single crystal diffractometer. The results show that the single crystal of MUTP is an orthogonal crystal system with Pnma space group. The thermal decomposition process of MUTP was studied by thermogravimetric analysis (TGA) and differential scanning calorimetry (DSC) technology. There were two exothermic peaks in TGA and DSC test, and the peak temperatures (<i>T</i><sub>p</sub>) were 261.61°C and 366.75°C, respectively. The thermal stability of MUTP was up to 247.10°C. Geometric optimization, frontier molecular orbitals, electrostatic potential (ESP), and weak interaction were explored by density functional theory using Gaussian 16. It is found that MUTP has a large energy gap (5.94 eV), which is larger than that of HMX (5.84 eV). The results of reduced density gradient method show that there are dense hydrogen bond interactions in MUTP with high electron density and intensity. In addition, a strong spatial repulsion is formed at the center of the cage.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 3","pages":""},"PeriodicalIF":1.8,"publicationDate":"2023-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139036886","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Laura S. Duarte, Daniele C. Durigon, Antonio L. Braga, Rosely A. Peralta
{"title":"Hydrolysis of phosphate diester catalyzed by new mononuclear copper(II) complexes containing selenium ligands","authors":"Laura S. Duarte, Daniele C. Durigon, Antonio L. Braga, Rosely A. Peralta","doi":"10.1002/poc.4596","DOIUrl":"10.1002/poc.4596","url":null,"abstract":"<p>Three new copper(II) mononuclear complexes containing different organoselenium groups (<b>1</b>–<b>3</b>) were synthesized and characterized by the following techniques: elemental analysis, IR and UV-Vis spectroscopies, electrochemical and conductimetric analysis, and mass spectrometry. Three new complexes, with substituents made in the <i>para</i> position of the aromatic portion of the <i>N</i>,<i>N</i>-bis(2-(phenylselanyl)ethyl)amine ligand: <i>p</i>-OCH<sub>3</sub> (<b>1</b>), <i>p</i>-CH<sub>3</sub> (<b>2</b>), and <i>p</i>-Cl (<b>3</b>), were synthetized to compare with the already published complex (<b>4</b>), with no substituents. The ligand coordinates to the copper(II) center in a tridentate way with <i>Se</i>, <i>N</i>, <i>Se</i> as donor atoms. The hydrolytic activity in phosphate diester cleavage of the complexes was investigated using 2,4-BDNPP as substrate. The modifications in the ligand are reflected in the difference between the catalytic and activation parameters, where the <i>k</i><sub>cat</sub> values follow the order: <b>4</b> > <b>2</b> > <b>3</b> > <b>1</b>.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 7","pages":""},"PeriodicalIF":1.9,"publicationDate":"2023-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138824298","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Gregory A. Bowers, Corey A. Baldasare, Paul G. Seybold
{"title":"Looking inside: Analysis of keto-enol equilibrium using agent-based models","authors":"Gregory A. Bowers, Corey A. Baldasare, Paul G. Seybold","doi":"10.1002/poc.4592","DOIUrl":"10.1002/poc.4592","url":null,"abstract":"<p>The subject of keto-enol equilibrium has a long history and well-established position within physical organic chemistry. Nonetheless, one still finds numerous reports of confusing findings and questions of accuracy when dealing with its practical application. In this report, some apparently anomalous recent observations are reviewed and then reexamined using density functional theory computations and agent-based (cellular automata) models of the keto-enol-anion equilibrium system. It becomes apparent that a resolution of many of the results can be achieved by taking into account the fact that although the ketone form is often present in overwhelmingly greater concentration, the enol can still contribute significantly to formation of the anion through its much greater acidity. Thus, in these cases, dissociation data assigned solely to the ketone form should in fact be recognized as representing a mixture of contributions from both the keto and the (neglected) enol form.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 3","pages":""},"PeriodicalIF":1.8,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/poc.4592","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138693265","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Somayeh Rahmati, Mojgan Ayoubi-Chianeh, Mohamad Z. Kassaee
{"title":"Activation of dihydrogen by group-14 substituted germylenes","authors":"Somayeh Rahmati, Mojgan Ayoubi-Chianeh, Mohamad Z. Kassaee","doi":"10.1002/poc.4593","DOIUrl":"10.1002/poc.4593","url":null,"abstract":"<p>We have investigated the structural and thermodynamic parameters of group-14 substituted germylenes and their reactivity toward the H<sub>2</sub> molecule using density functional theory (DFT). We conducted the detailed Kohn–Sham molecular orbital (KS-MO) analysis to quantify the effective factors behind the increased reactivity of germylenes in going from C to Sn as substituents. The quantum theory of atoms in molecules (QTAIM), non-covalent interaction (NCI), and natural bond orbital (NBO) analyses revealed the nature of bonds and interactions and demonstrated the reactivity trend of germylenes in the presence of H<sub>2</sub>. The results showed that in going from C to Sn, the reactivity increased due to an improvement in \u0000<math>\u0000 <mi>σ</mi></math>-donation interaction between the filled lone-pair orbital of the germylene (LP<sub>Ge</sub>) and the \u0000<math>\u0000 <mi>σ</mi></math>*-orbital of H<sub>2</sub>, which decreased the reaction barrier (\u0000<math>\u0000 <mo>∆</mo></math><i>E</i><sup>‡</sup>). As the germylene substitution was varied from C to Sn, a significant reactivity was observed for the germylene toward the H<sub>2</sub>. This observation was caused by a reduction in steric repulsion between the germylene and the H<sub>2</sub> and less activation energy due to the higher \u0000<math>\u0000 <mi>σ</mi></math>-donation and lower back-donation. We have presented the reactivity of new and rationally designed germylenes toward H<sub>2</sub> using various analyses that will serve as a guide for the activation of small molecules such as H<sub>2</sub>, which is employed in many subsequent reactions.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 3","pages":""},"PeriodicalIF":1.8,"publicationDate":"2023-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138574026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jaweria Rukhsar, Muhammad Waqas, Muhamed Salim Akhter, Mohamed Shaban, Sameerah I. Al-Saeedi, Muhammad Shabir Mahr, Tamer H. A. Hasanin, Mahmoud A. A. Ibrahim, Naifa S. Alatawi, Rasheed Ahmad Khera
{"title":"A DFT approach toward designing selenophene-based unfused small molecule acceptors by end-capped modification for improving the photovoltaic performance of organic solar cells","authors":"Jaweria Rukhsar, Muhammad Waqas, Muhamed Salim Akhter, Mohamed Shaban, Sameerah I. Al-Saeedi, Muhammad Shabir Mahr, Tamer H. A. Hasanin, Mahmoud A. A. Ibrahim, Naifa S. Alatawi, Rasheed Ahmad Khera","doi":"10.1002/poc.4587","DOIUrl":"10.1002/poc.4587","url":null,"abstract":"<p>In this study, we have developed a series of eight non-fullerene acceptors, constituting A-D-A type small molecules named (SS1–SS8) to enlighten the open-circuit voltage (<i>V</i><sub>oc</sub>) and the efficacy of pre-existed SR (reference) molecule. Density functional theory has been adopted to computationally assess the optoelectronic features of fabricated molecules with the B3LYP/6-31G (d, p) level of theory. Several factors like charge transfer, light absorption, binding energy, dipole moment, and reorganization energy are studied. The frontier orbitals analysis revealed that all the newly developed molecules have less bandgap (ranging from 1.97 to 2.22 eV) than SR (2.23 eV). Similarly, these newly engineered molecules also revealed better light absorption by screening remarkable redshift from 676.23 to 789.28 nm than SR (673.83 nm) in chloroform. These molecules have remarkably reduced excitation energy ranging from 1.71 to 1.83 eV than SR 1.84 eV. The exclusive CT analysis is carried out via J61:SS8 complex because of the higher <i>V</i><sub>oc</sub> of SS8 (acceptor). Additionally, SS8 has shown the least energy loss, making it a strong contender to be used to develop improved OSCs. Because of the exceptionally improved characteristics, these newly engineered molecules (especially SS8) can be considered potential aspirants for fabricating proficient OSCs.</p>","PeriodicalId":16829,"journal":{"name":"Journal of Physical Organic Chemistry","volume":"37 3","pages":""},"PeriodicalIF":1.8,"publicationDate":"2023-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138547966","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}