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Annual International Conference on Research in Computational Molecular Biology最新文献

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Inferring Intra-tumor Heterogeneity from High-Throughput DNA Sequencing Data 从高通量DNA测序数据推断肿瘤内异质性
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2013-04-07 DOI: 10.1007/978-3-642-37195-0_14
Layla Oesper, Ahmad Mahmoody, Benjamin J. Raphael
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引用次数: 20
Distinguishing between Genomic Regions Bound by Paralogous Transcription Factors 区分由同源转录因子结合的基因组区域
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2013-04-07 DOI: 10.1007/978-3-642-37195-0_12
Alina Munteanu, R. Gordân
{"title":"Distinguishing between Genomic Regions Bound by Paralogous Transcription Factors","authors":"Alina Munteanu, R. Gordân","doi":"10.1007/978-3-642-37195-0_12","DOIUrl":"https://doi.org/10.1007/978-3-642-37195-0_12","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-04-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131033268","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
Abstract: Using the Fast Fourier Transform to Accelerate the Computational Search for RNA Conformational Switches 利用快速傅里叶变换加速RNA构象开关的计算搜索
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2013-04-07 DOI: 10.1007/978-3-642-37195-0_22
Evan Senter, Saad Sheikh, Iván Dotú, Yann Ponty, P. Clote
{"title":"Abstract: Using the Fast Fourier Transform to Accelerate the Computational Search for RNA Conformational Switches","authors":"Evan Senter, Saad Sheikh, Iván Dotú, Yann Ponty, P. Clote","doi":"10.1007/978-3-642-37195-0_22","DOIUrl":"https://doi.org/10.1007/978-3-642-37195-0_22","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"51 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-04-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125693884","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 17
An Accurate Method for Inferring Relatedness in Large Datasets of Unphased Genotypes via an Embedded Likelihood-Ratio Test 基于嵌入似然比检验的非阶段性基因型大数据集相关性的准确推断方法
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2013-04-07 DOI: 10.1007/978-3-642-37195-0_18
Jesse M. Rodriguez, S. Batzoglou, S. Bercovici
{"title":"An Accurate Method for Inferring Relatedness in Large Datasets of Unphased Genotypes via an Embedded Likelihood-Ratio Test","authors":"Jesse M. Rodriguez, S. Batzoglou, S. Bercovici","doi":"10.1007/978-3-642-37195-0_18","DOIUrl":"https://doi.org/10.1007/978-3-642-37195-0_18","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"63 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-04-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129935553","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data 基于遗传路径的基于基因型数据的系谱重建算法
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2013-04-07 DOI: 10.1007/978-3-642-37195-0_7
Dan He, Zhanyong Wang, B. Han, L. Parida, E. Eskin
{"title":"IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data","authors":"Dan He, Zhanyong Wang, B. Han, L. Parida, E. Eskin","doi":"10.1007/978-3-642-37195-0_7","DOIUrl":"https://doi.org/10.1007/978-3-642-37195-0_7","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"141 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-04-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116841255","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 19
Simultaneously Learning DNA Motif along with Its Position and Sequence Rank Preferences through EM Algorithm 通过EM算法同时学习DNA基序及其位置和序列排序偏好
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2012-04-21 DOI: 10.1007/978-3-642-29627-7_37
Zhizhuo Zhang, Cheng Wei Chang, H. Willy, E. Cheung, W. Sung
{"title":"Simultaneously Learning DNA Motif along with Its Position and Sequence Rank Preferences through EM Algorithm","authors":"Zhizhuo Zhang, Cheng Wei Chang, H. Willy, E. Cheung, W. Sung","doi":"10.1007/978-3-642-29627-7_37","DOIUrl":"https://doi.org/10.1007/978-3-642-29627-7_37","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"367 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"113987637","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Evolution of Genome Organization by Duplication and Loss: An Alignment Approach 基因组组织的复制和丢失进化:一种比对方法
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2012-04-21 DOI: 10.1007/978-3-642-29627-7_10
Patrick Holloway, K. M. Swenson, D. Ardell, N. El-Mabrouk
{"title":"Evolution of Genome Organization by Duplication and Loss: An Alignment Approach","authors":"Patrick Holloway, K. M. Swenson, D. Ardell, N. El-Mabrouk","doi":"10.1007/978-3-642-29627-7_10","DOIUrl":"https://doi.org/10.1007/978-3-642-29627-7_10","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"14 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132271273","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
Estimating the Accuracy of Multiple Alignments and its Use in Parameter Advising 多重对准精度估计及其在参数建议中的应用
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2012-04-21 DOI: 10.1007/978-3-642-29627-7_5
Dan F. DeBlasio, T. Wheeler, J. Kececioglu
{"title":"Estimating the Accuracy of Multiple Alignments and its Use in Parameter Advising","authors":"Dan F. DeBlasio, T. Wheeler, J. Kececioglu","doi":"10.1007/978-3-642-29627-7_5","DOIUrl":"https://doi.org/10.1007/978-3-642-29627-7_5","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132743589","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 24
Detecting SNP-Induced Structural Changes in RNA: Application to Disease Studies 检测snp诱导的RNA结构变化:在疾病研究中的应用
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2012-04-21 DOI: 10.1007/978-3-642-29627-7_25
R. Salari, C. Kimchi-Sarfaty, M. Gottesman, T. Przytycka
{"title":"Detecting SNP-Induced Structural Changes in RNA: Application to Disease Studies","authors":"R. Salari, C. Kimchi-Sarfaty, M. Gottesman, T. Przytycka","doi":"10.1007/978-3-642-29627-7_25","DOIUrl":"https://doi.org/10.1007/978-3-642-29627-7_25","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"282 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124510963","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
TrueSight: Self-training Algorithm for Splice Junction Detection Using RNA-seq TrueSight:基于RNA-seq的剪接检测自训练算法
Annual International Conference on Research in Computational Molecular Biology Pub Date : 2012-04-21 DOI: 10.1007/978-3-642-29627-7_14
Yang Li, Hong-Mei Li, P. Burns, M. Borodovsky, G. Robinson, Jian Ma
{"title":"TrueSight: Self-training Algorithm for Splice Junction Detection Using RNA-seq","authors":"Yang Li, Hong-Mei Li, P. Burns, M. Borodovsky, G. Robinson, Jian Ma","doi":"10.1007/978-3-642-29627-7_14","DOIUrl":"https://doi.org/10.1007/978-3-642-29627-7_14","url":null,"abstract":"","PeriodicalId":160293,"journal":{"name":"Annual International Conference on Research in Computational Molecular Biology","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2012-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129659901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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