José-Manuel Fallas-Ramirez, Eleaneth Baltodano-Viales, Juan-José Mora-Román, Lorena Hernandez, Ana M. Pérez, Fabrice Vaillant
{"title":"Metabolomic screening and urolithins metabotypes identification in the urinary metabolome of Costa Rican volunteers after blackberry ( Rubus adenotrichos)-based drink consumption","authors":"José-Manuel Fallas-Ramirez, Eleaneth Baltodano-Viales, Juan-José Mora-Román, Lorena Hernandez, Ana M. Pérez, Fabrice Vaillant","doi":"10.3233/jbr-240010","DOIUrl":"https://doi.org/10.3233/jbr-240010","url":null,"abstract":"BACKGROUND:Besides providing nutritional value, functional foods have potential beneficial effects on health. Consumers worldwide seek food products with added value based on physical and mental well-being. OBJECTIVE:This study aimed to analyze the urinary metabolome of volunteers who consumed a drink based on Costa Rican blackberries (Rubus adenotrichos) to identify the presence of urolithins and other possible bioactive compounds related to beneficial effects on health. METHODS:Fifteen healthy non-smoking male volunteers aged between 19 and 43 years old who consumed 250 ml of blackberry-based drink for breakfast for eight consecutive days were selected. Urine samples were obtained before and after drink consumption, which were submitted to analysis by Ultra-Performance Liquid Chromatography coupled to a Mass Detector (UPLC/ESI-Q-TOF-MS). Subsequently, a metabolomic analysis of the results was performed to identify the presence or absence of urolithins and other bioactive metabolites related to blackberry juice consumption. RESULTS:It was possible to detect high intensity presence of urolithin A (n = 6) and high intensity presence of both urolithin A and B (n = 5) in urine samples in several volunteers. However, finding them was impossible in others, or they were at very low intensities (n = 4). Likewise, it was possible to identify Menth-1-en-4,8 diol glucuronide and 1-O-E-Cinnamoyl-(6-arabinosylglucose) as other compounds related to the consumption of blackberries. CONCLUSIONS:The consumption of Costa Rican blackberries allowed us to demonstrate the presence of three metabotypes within the study population: 40% of strong urolithin A (UAP) producers, 33.3% of both urolithin (A and B) producers (UBP), and 26.7% of weak urolithin A producers (0P). Finally, it is recommended to carry out more research in this regard, considering a greater number of volunteers and including people of both sexes.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"2012 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142196130","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mokhtar Mohamed Abdel-Kader, Nadia Gamel El-Gamal, Amany Abd El Mohsen Ramadan, Mohamed Saied Ali Khalil, Nehal Samy El-Mougy
{"title":"The efficacy of adding some antioxidant compounds in alleviating strawberry fruit rots during storage","authors":"Mokhtar Mohamed Abdel-Kader, Nadia Gamel El-Gamal, Amany Abd El Mohsen Ramadan, Mohamed Saied Ali Khalil, Nehal Samy El-Mougy","doi":"10.3233/jbr-240031","DOIUrl":"https://doi.org/10.3233/jbr-240031","url":null,"abstract":"BACKGROUND:Postharvest decay caused by Botrytis cinerea (gray mold) and Fusarium solani (fruit decay) negatively affects strawberry fruits during handling and marketing. OBJECTIVE:The effect of cinnamon oil, sodium benzoate, potassium sorbate and/or pomegranate peel powder were estimated on the growth of the two pathogenic fungi and their fruit decay incidence under in vitro and in vivo conditions. METHODS:The isolated fungi from decayed strawberry fruits were identified as Botrytis cinerea and Fusarium sp. The isolated Fusarium sp. was identified molecularly as Fusarium solani and registered in GenBank under accession number ON248575.1 (https://www.ncbi.nlm.nih.gov/nuccore/ON248575.1). RESULTS:Complete fungal growth suppression was observed at a concentration of 3% for all tested materials, Additionally the same (100%) effect was achieved at 2% of a combination of essential oil, salts and pomegranate peel powder. Significant reduction in decay incidence and severity was observed in inoculated strawberry fruits treated with the same concentrations of the tested materials after 10 and 15 days of storage. CONCLUSIONS:The results demonstrate that cinnamon oil, sodium benzoate, potassium sorbate and/or pomegranate peel powder have potency as eco-friendly products, for safe postharvest treatments against strawberry fruit rots during storage. They could be recommended for use in packing-houses due to their wide utilization as safe food preservatives.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"8 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142196129","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"New insights into the identification of biochemical traits linked to rooting percentage in fig ( Ficus carica L.) cuttings","authors":"Abbas Mirsoleimani, Zahra Zinati, Shima Abbasi","doi":"10.3233/jbr-240032","DOIUrl":"https://doi.org/10.3233/jbr-240032","url":null,"abstract":"BACKGROUND:The fig (Ficus carica L.) tree known for its tasty and nutritious fruits, is typically propagated by cutting. While previous studies have focused on the effects of different treatments and environmental conditions on fig cutting propagation, little attention has been paid to the specificrole and association of biochemical properties in leaves, stem bark and fruit on the rooting process. OBJECTIVE:This research explores the complex relationship between 40 biochemical traits and the rooting ability of fig cuttings. To achieve this objective, various machine learning techniques were employed, such as a random forest model, feature importance analysis, linear regression, and principal component analysis (PCA). RESULTS:The random forest model showed significant predictive ability with a classification accuracy of 100%, supported by a high kappa statistic. Feature importance analysis identified a* (a colorimetric parameter in fruit), fruit trans-ferulic acid and leaf total flavonoids as the most influential traits in determining the rooting ability of cuttings. The robustness of these findings is supported by the high R-squared value (0.9002) and low error metrics (MAE 0.7554 and MSE 0.6980) of the linear regression model built on these important traits. In parallel, PCA indicated that a*, leaf total flavonoids and fruit trans-ferulic acid were the dominant traits in samples with lower rooting percentage. CONCLUSIONS:These identified biomarkers can be effectively used by fig breeders and growers to select and introduce fig cultivars with improved rooting ability.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"30 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-08-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141931618","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lidiane Rodrigues da Silva, Fausto Henrique Vieira Araújo, Sabrina Rodrigues Ferreira, José Carlos Barbosa dos Santos, Caique Menezes de Abreu, Ricardo Siqueira da Silva, Márcia Regina da Costa
{"title":"Strawberries in a warming world: examining the ecological niche of Fragaria×ananassa Duch. Across different climate scenarios","authors":"Lidiane Rodrigues da Silva, Fausto Henrique Vieira Araújo, Sabrina Rodrigues Ferreira, José Carlos Barbosa dos Santos, Caique Menezes de Abreu, Ricardo Siqueira da Silva, Márcia Regina da Costa","doi":"10.3233/jbr-240012","DOIUrl":"https://doi.org/10.3233/jbr-240012","url":null,"abstract":"BACKGROUND:Strawberry (Fragaria×ananassa Duch.) is a species of great economic and nutritional importance. It is widely cultivated in different regions of the world. However, climatic factors have a significant influence on its production. OBJECTIVE:To evaluate the ecoclimatic suitability and growth index of F.×ananassa in the face of the impacts of climate change in Brazil and the world. METHODS:The potential global distribution of F.×ananassa it was based on predicted global climate changes using CLIMEX and the A1B and A2 emissions scenario for the years 2050 and 2100. CLIMEX weekly growth index (GIw) was applied, and productivity data in commercial strawberry cultivation in Brazilian areas were collected. RESULTS:The results indicate a progressive reduction in areas suitable for strawberry cultivation globally, mainly on the African continent, Australia, China, and the Americas for the years 2050 and 2100. In Brazil, only the South region and part of the Southeast will continue to be suitable for strawberry production. CONCLUSIONS:The CLIMEX model predicts a reduction in the suitable area for cultivating Fragaria×ananassa Duch between 2050 and 2100 due to climate change. The generated maps can help identify new cultivation areas and support genetic improvement programmes to develop cultivars more tolerant to heat.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"5 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141781373","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Elizabeth Lorch-Schierning, Anya Perera, Kambiz Baghalian
{"title":"Using vertical farming systems for propagating everbearing strawberry: Physiological and technological feasibility assessment","authors":"Elizabeth Lorch-Schierning, Anya Perera, Kambiz Baghalian","doi":"10.3233/jbr-230051","DOIUrl":"https://doi.org/10.3233/jbr-230051","url":null,"abstract":"BACKGROUND:One of the biggest challenges facing the soft fruit sector is to propagate disease free strawberry plants in a timely manner, financially viable approach and in an eco-friendly fashion. OBJECTIVE:This study sets out to investigate the efficacy of growing everbearing Fragaria×ananassa ‘Malling Ace’ runners at different propagation dates and under Different LED lighting regimes using vertical farming units and glasshouse (as control). METHODS:To evaluate the effects of the treatment factors, some of the main horticultural features including rooting success rate, rooting speed, root and shoot biomass production, chlorophyll content and bud emergence were measured and statistically analysed. In addition, this study aimed to investigate the energy efficiency of a self-sufficient Direct Current (DC) based vertical farming unit, versus a vertical farming unit using the Alternate Current (AC) electricity provided by national grid electricity. RESULTS:light, tipping date, and the interaction between light and tipping date, significantly influenced shoot biomass, total crown diameter, and chlorophyll content in the leaves of ‘Malling Ace’. In terms of energy demand, the DC unit had a higher level of energy efficiency over AC unit with 23% less energy demand. CONCLUSION:In general, this trial demonstrated vertical farming as a potentially sustainable method and efficient tool in propagating strawberry plants.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"363 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141549601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Brigitte Liliana Moreno-Medina, Fánor Casierra-Posada, Miguel Ángel García-Parra
{"title":"Chlorophyll a fluorescence and phytochemical response in blackberry species ( Rubus sp) cultivated in the high tropics","authors":"Brigitte Liliana Moreno-Medina, Fánor Casierra-Posada, Miguel Ángel García-Parra","doi":"10.3233/jbr-230043","DOIUrl":"https://doi.org/10.3233/jbr-230043","url":null,"abstract":"BACKGROUND:\u0000The evaluation of chlorophyll fluorescence activity is a useful tool for rapid and effective assessments of the effect of abiotic factors on the physiology of different crops. In Rubus, this type of measurements describes tolerance to high temperatures, sensitivity to heat and morphological alterations in flowering and chlorophyll content, as a result of plant stress. OBJECTIVE:\u0000The present research estimated chlorophyll fluorescence and the presence of some phenolic compounds in the leaves of three cultivars of blackberry (Rubus sp.) established in the central region of Colombia, under conditions of open air between 2400 and 2800 masl. MATERIAL AND METHODS:\u0000This was done through the measurement of chlorophyll a (Junior-PAM II modulated fluorometer), the quantification of phenolic compounds (Folin Ciocalteu), the determination of antioxidant capacity (DPPH and ABTS) and the study of phenolic profiles (UHPLC) in leaves of three blackberry cultivars. RESULTS:\u0000Cultivars R. alutaceus (0.66), R. glaucus (0.73) and R. alpinus (0.76), presented values lower than the optimum (0.83), for the parameter F v\u0000/F m\u0000. In addition, the direct relationships between the parameters that define the behavior of PSII and the accumulation of different polyphenols were described. Reference was also made to the content of phenolic compounds (ranging from 125 to 150 mg GA g–1 dw), which did not show significant statistical differences. The heat map and principal component analysis show the close relationship between the parameters that characterize the functioning of PSII and the accumulation of phenolic compounds, as a mechanism of adaptation to the adverse conditions of the blackberry cultivars studied. CONCLUSIONS:\u0000The results reveal that the leaves of the Rubus studied could be a source of functional ingredients for use in the cosmetic, nutraceutical and food industries and epigallocatechin was attributed the greatest responsibility for the antioxidant capacity.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"83 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140940554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"From the chokeberry fruit products and by-products to health-promoting effects through multifaceted in vitro bioactivity evaluation and molecular docking studies","authors":"Milica Milutinović, Nada Ćujić Nikolić, Milica Radan, Tatjana Mihajilov Krstev, Katarina Šavikin, Predrag Petrović, Milica Randjelović, Bojana Miladinović, Suzana Branković, Dušanka Kitić","doi":"10.3233/jbr-230066","DOIUrl":"https://doi.org/10.3233/jbr-230066","url":null,"abstract":"BACKGROUND:\u0000Polyphenolic-rich chokeberry extracts and juice could provide health benefits in humans. Moreover, by-products after processing stand out as a potential new source of valuable compounds. OBJECTIVE:\u0000The research aimed to evaluate in vitro bioactivity of chokeberry fruit extract, juice, and waste extract (material remaining after juice processing) based on their chemical composition and molecular docking analysis. METHODS:\u0000Spectrophotometric methods were used to determine the phenolics, anthocyanins, flavonoids, and proanthocyanins content in freeze-dried samples. Additionally, individual anthocyanins, flavonoids, and sugars were identified through HPLC analysis. The antioxidant capacity was tested using two in vitro methods and assessing antimicrobial activity. The effects of tyrosinase and acetylcholinesterase inhibition were examined using spectrophotometric methods. Molecular docking analysis identified the interaction of chokeberry components with the active sites of these enzymes. RESULTS:\u0000The waste extract exhibited the most robust antioxidant activity within the DPPH system. While bactericidal activity was absent across all chokeberry preparations, they demonstrated inhibitory effects on specific microbiological strains relevant to the gastrointestinal tract. Results revealed the chokeberry products’ ability to inhibit tyrosinase and acetylcholinesterase. Molecular docking confirmed the strong interactions between chokeberry compounds and these enzymes. CONCLUSION:\u0000The results indicate the potential of chokeberry products and by-products as valuable resources for pharmaceutical applications.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"126 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140805456","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Pre-harvest treatments: A different insight into preservation of strawberries","authors":"Jingcheng Xu, Ying Wang, Lin Chai, Danping Yin, Tingwei Lin, Yujia Tao, Shudong Liu, Huijuan Qi, Xianyi Gao, Jingyong Jiang","doi":"10.3233/jbr-240001","DOIUrl":"https://doi.org/10.3233/jbr-240001","url":null,"abstract":"Strawberry is one of the most favored consumed fresh fruits worldwide. However, the major constraint limiting future sustainable production and sales of strawberries is post-harvest decay. Thus, taking a deep look into the effective preservation measures including pre- and post-harvest techniques to retain freshness and inhibit the pathological spoilage of strawberries in the supply chain is of great significance and necessity. At present, relying solely on post-harvest technology is not enough to fix the aim of strawberry fruit preservation and longer shelf life. On the contrary, pre-harvest treatments could be extend shelf life of strawberry fruit and adapt to the diverse post-harvest environments. This review give the latest pre-harvest treatments, their effects on post-harvest quality and storability of strawberries, and develop the expectation of strawberries pre-harvest methods applicated in the future.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"43 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140571282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Effects of 60Co γ-irradiation treatment on the diversity of fungal microflora in blueberries during cold storage","authors":"Feng Wang, Chengdu Miao, Peiming Ye, Lukai Ma, Qin Wang, Dongjie Liu, Gengsheng Xiao","doi":"10.3233/jbr-230038","DOIUrl":"https://doi.org/10.3233/jbr-230038","url":null,"abstract":"In the present study, the effects of 60Co-γ irradiation on the diversity of fungal microflora in blueberries during cold storage have been explored in detail. The effects of irradiation on the fungal microflora in blueberries could be observed at the lowest effective dose of 1.0 kGy. The genome library of fungal microflora in blueberries was evaluated by tusing Shannon, Simpson, Chao1, and ACE indices, presenting good coverage of blueberry samples. Principal coordinate analysis clarified the differences in the evolution and clustering of fungi in blueberries under different irradiation levels. The composition and diversity of fungal microflora in blueberries treated with different doses of radiation exhibited significant differences under cold storage of 4°C. However, most of the fungi belonged to the Ascomycota at the phylum. The fungal microflora was relatively stable at the initial stage of cold storage, however, the diversity of fungal species in irradiated blueberries varied greatly in the middle stage around the 15th day. This comprehensive study provides deeper insight about the effects of irradiation on the evolution of fungal microflora in blueberries during cold storage. The findings of this study lay a good foundation for post-harvest storage and preservation of blueberries.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"62 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-03-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140075030","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Zexiu Qi, Bei Yang, Francesca Giampieri, Danila Cianciosi, José Miguel Alvarez-Suarez, Maria Elexpuru-Zabaleta, Josè L. Quiles, Tamara Y. Forbes-Hernandez, Di Zhang, Weibin Bai, Lingmin Tian, Bruno Mezzetti, Maurizio Battino, Yasmany Armas Diaz
{"title":"The preventive and inhibitory effects of red raspberries on cancer","authors":"Zexiu Qi, Bei Yang, Francesca Giampieri, Danila Cianciosi, José Miguel Alvarez-Suarez, Maria Elexpuru-Zabaleta, Josè L. Quiles, Tamara Y. Forbes-Hernandez, Di Zhang, Weibin Bai, Lingmin Tian, Bruno Mezzetti, Maurizio Battino, Yasmany Armas Diaz","doi":"10.3233/jbr-240004","DOIUrl":"https://doi.org/10.3233/jbr-240004","url":null,"abstract":"Red raspberries are gaining attention more and more for their nutritional and bioactive components, with potential health effects such as antitumor properties. This review aims to describe the antioxidant activities of red raspberries, emphasizing the role of anthocyanins and ellagitannins as primary contributors among red raspberry polyphenols; it also outlined the connection between red raspberries and their role in inhibiting cancer cell growth by regulating oxidative stress. Numerous studies suggest that red raspberries are able to block cancer cell progression by inhibiting proliferation, migration, and autophagy, as well as regulating the cell cycle, angiogenesis, and DNA damage repair. This review sheds light to the growing evidence supporting antioxidants as a crucial link between fruit consumption and cancer prevention.","PeriodicalId":15194,"journal":{"name":"Journal of Berry Research","volume":"5 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140045508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}