International journal of systematic bacteriology最新文献_第7页

Microbispora corallina sp. nov., a new species of the genus Microbispora isolated from Thai soil. 从泰国土壤中分离的小孢子虫属一新种。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1761

Y Nakajima, V Kitpreechavanich, K Suzuki, T Kudo

引用次数: 115

Mycobacterium wolinskyi sp. nov. and Mycobacterium goodii sp. nov., two new rapidly growing species related to Mycobacterium smegmatis and associated with human wound infections: a cooperative study from the International Working Group on Mycobacterial Taxonomy. 沃林斯基分枝杆菌和古地分枝杆菌，与耻垢分枝杆菌相关的两个快速生长的新物种，与人类伤口感染有关:国际分枝杆菌分类工作组的合作研究。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1493

B A Brown, B Springer, V A Steingrube, R W Wilson, G E Pfyffer, M J Garcia, M C Menendez, B Rodriguez-Salgado, K C Jost, S H Chiu, G O Onyi, E C Böttger, R J Wallace

{"title":"Mycobacterium wolinskyi sp. nov. and Mycobacterium goodii sp. nov., two new rapidly growing species related to Mycobacterium smegmatis and associated with human wound infections: a cooperative study from the International Working Group on Mycobacterial Taxonomy.","authors":"B A Brown, B Springer, V A Steingrube, R W Wilson, G E Pfyffer, M J Garcia, M C Menendez, B Rodriguez-Salgado, K C Jost, S H Chiu, G O Onyi, E C Böttger, R J Wallace","doi":"10.1099/00207713-49-4-1493","DOIUrl":"https://doi.org/10.1099/00207713-49-4-1493","url":null,"abstract":"Previous investigations demonstrated three taxonomic groups among 22 clinical isolates of Mycobacterium smegmatis. These studies were expanded to 71 clinical isolates, of which 35 (49%) (group 1) were identical to five ATCC reference strains including the type strain ATCC 19420T. Twenty-eight isolates (39%) were group 2, and eight isolates (11%) were group 3. Isolates of groups 2 and 3 were most often associated with post-traumatic or post-surgical wound infections including osteomyelitis, were susceptible to sulfamethoxazole, amikacin, imipenem and the tetracyclines, variably resistant to clarithromycin, and susceptible (group 1), intermediately resistant (group 2) or resistant (group 3) to tobramycin. The three groups were similar by routine biochemical and growth characteristics, but had different mycolic acid dimethoxy-4-coumarinylmethyl ester elution patterns by HPLC and different PCR-restriction enzyme patterns of a 439 bp fragment of the hsp-65 gene. Group 3 isolates differed from group 1 by 18 bp by 16S rRNA sequencing and exhibited < 25% homology by DNA-DNA hybridization, being most closely related to Mycobacterium mageritense. The 16S rRNA of group 1 and group 2 isolates differed by only 3 bp, but by DNA-DNA hybridization they exhibited only 40% homology. The following names are proposed: Mycobacterium goodii sp. nov. for group 2 isolates (type strain ATCC 700504T = MO69T), Mycobacterium wolinskyi sp. nov. for group 3 isolates (type strain ATCC 700010T = MO739T) and Mycobacterium smegmatis sensu stricto for group 1 isolates.","PeriodicalId":14428,"journal":{"name":"International journal of systematic bacteriology","volume":"49 Pt 4 ","pages":"1493-511"},"PeriodicalIF":0.0,"publicationDate":"1999-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1099/00207713-49-4-1493","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21415624","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 176

Actinomyces bowdenii sp. nov., isolated from canine and feline clinical specimens. 从犬和猫临床标本中分离的鲍氏放线菌。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1873

C Pascual, G Foster, E Falsen, K Bergström, C Greko, M D Collins

引用次数: 32

A novel species of thermoacidophilic archaeon, Sulfolobus yangmingensis sp. nov. 一个新的嗜热嗜酸古菌，杨明氏硫酸藻sp.nov。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1809

R L Jan, J Wu, S M Chaw, C W Tsai, S D Tsen

{"title":"A novel species of thermoacidophilic archaeon, Sulfolobus yangmingensis sp. nov.","authors":"R L Jan, J Wu, S M Chaw, C W Tsai, S D Tsen","doi":"10.1099/00207713-49-4-1809","DOIUrl":"https://doi.org/10.1099/00207713-49-4-1809","url":null,"abstract":"A novel microbe was isolated from a geothermal vent in Yang-Ming National Park in northern Taiwan. This spherical microbe with mean cell diameter of 1.1 +/- 0.2 microns is a facultatively chemolithoautotrophic archaeon that grows on elemental sulfur and reduced sulfur compounds. The optimal pH and temperature for growth are 4.0 (pH range 2.0-6.0) and 80 degrees C (temperature range 65-95 degrees C). Its membranes contain the lipids calditoglycerocaldarchaeol and caldarchaeol, which are common to other members of the Sulfolobaceae. Like Sulfolobus acidocaldarius, Sulfolobus shibatae and Sulfolobus solfataricus, the new isolate utilizes sugars and amino acids effectively as sole carbon sources. The G + C content of the genomic DNA was 42 mol%. DNA of the isolate hybridized weakly to the DNA of other Sulfolobus species. Phylogenetic analysis of the 16S rRNA indicated that the new isolate represents a deep branch within the genus Sulfolobus. On the basis of these properties, the new isolate appears to represent a new species of Sulfolobus, for which the name Sulfolobus yangmingensis sp. nov. is proposed. The type strain is strain YM1T.","PeriodicalId":14428,"journal":{"name":"International journal of systematic bacteriology","volume":"49 Pt 4 ","pages":"1809-16"},"PeriodicalIF":0.0,"publicationDate":"1999-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1099/00207713-49-4-1809","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21415945","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 49

Helcococcus ovis sp. nov., a gram-positive organism from sheep. 山羊Helcococcus ovis sp. nov，一种来自绵羊的革兰氏阳性有机体。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1429

M D Collins, E Falsen, G Foster, L R Monasterio, L Dominguez, J F Fernandez-Garazabal

引用次数: 47

Comparison of partial malolactic enzyme gene sequences for phylogenetic analysis of some lactic acid bacteria species and relationships with the malic enzyme. 部分乳酸菌种苹果酸酶基因序列的系统发育分析及其与苹果酸酶的关系。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1417

A Groisillier, A Lonvaud-Funel

{"title":"Comparison of partial malolactic enzyme gene sequences for phylogenetic analysis of some lactic acid bacteria species and relationships with the malic enzyme.","authors":"A Groisillier, A Lonvaud-Funel","doi":"10.1099/00207713-49-4-1417","DOIUrl":"https://doi.org/10.1099/00207713-49-4-1417","url":null,"abstract":"DNA sequences covering 36% of the mle gene that encodes the malolactic enzyme were determined for 13 strains of lactic acid bacteria, representing Pediococcus, Leuconostoc, Lactobacillus and Oenococcus genera. The sequences were aligned with the corresponding region of mleS in Lactococcus lactis. The phylogenetic distance matrix tree of all mle sequences was compared with the 16S rRNA phylogenetic tree. The analysis showed that the mle fragment evolved more rapidly than the 16S gene and differently. Pediococcus and Lactobacillus species were intermixed in the 16S rRNA tree whereas they were separated in the mle tree. Leuconostoc mesenteroides and Oenococcus oeni were distinct from other species in the 16S rRNA tree, whereas they were intermixed with Lactobacillus species and Lactococcus lactis in the mle tree. The amino acid sequences deduced from partial mle genes were aligned with 22 malic enzyme sequences and the corresponding phylogenetic tree was constructed. Malic and malolactic enzymes were distinct at the phylogenetic level, except for malic enzymes of yeast and Escherichia coli which were nearer the malolactic enzymes than the other malic enzymes. The analysis of conserved sites showed several interesting amino acids specific to either malic enzyme or malolactic enzyme.","PeriodicalId":14428,"journal":{"name":"International journal of systematic bacteriology","volume":"49 Pt 4 ","pages":"1417-28"},"PeriodicalIF":0.0,"publicationDate":"1999-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1099/00207713-49-4-1417","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21414634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 38

Ornithinicoccus hortensis gen. nov., sp. nov., a soil actinomycete which contains L-ornithine. 禽酸球菌(Ornithinicoccus hortensis gen. nov.， sp. nov.)是一种含有l -鸟氨酸的土壤放线菌。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1717

I Groth, P Schumann, K Martin, B Schuetze, K Augsten, I Kramer, E Stackebrandt

{"title":"Ornithinicoccus hortensis gen. nov., sp. nov., a soil actinomycete which contains L-ornithine.","authors":"I Groth, P Schumann, K Martin, B Schuetze, K Augsten, I Kramer, E Stackebrandt","doi":"10.1099/00207713-49-4-1717","DOIUrl":"https://doi.org/10.1099/00207713-49-4-1717","url":null,"abstract":"Two Gram-positive coccoid, non-motile bacteria with L-ornithine as diagnostic diamino acid of the peptidoglycan and an interpeptide bridge of L-Orn<--Gly(1,2)<--D-Glu were isolated from a sample of garden soil. The major menaquinone is MK-8(H4). 13-methyl and 12-methyl tetradecanoic acids are the predominant fatty acids. The polar lipids are phosphatidylinositol, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylserine and two unknown phospholipids. Mycolic acids are absent. The DNA base composition is 72 mol% G + C. Recent comparative 16S rDNA studies revealed that strains HKI 0125T and HKI 0131 represent a novel lineage adjacent to the family Intrasporangiaceae of the order Actinomycetales but distinct from the previously described genera of this family. On the basis of the genotypic, chemotaxonomic, morphological and physiological characteristics of these two isolates it is proposed to classify HKI 0125T and HKI 0131 in a new genus and species for which the name Ornithinicoccus hortensis gen. nov., sp. nov. is proposed. The type strain is HKI 0125T (= DSM 12335T).","PeriodicalId":14428,"journal":{"name":"International journal of systematic bacteriology","volume":"49 Pt 4 ","pages":"1717-24"},"PeriodicalIF":0.0,"publicationDate":"1999-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1099/00207713-49-4-1717","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21414853","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 53

Description of Gluconacetobacter sacchari sp. nov., a new species of acetic acid bacterium isolated from the leaf sheath of sugar cane and from the pink sugar-cane mealy bug. 从甘蔗叶鞘和粉红甘蔗粉蚧中分离的一种醋酸细菌——糖醋葡萄杆菌(Gluconacetobacter sacchari sp. nov.)的描述。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1681

I H Franke, M Fegan, C Hayward, G Leonard, E Stackebrandt, L I Sly

{"title":"Description of Gluconacetobacter sacchari sp. nov., a new species of acetic acid bacterium isolated from the leaf sheath of sugar cane and from the pink sugar-cane mealy bug.","authors":"I H Franke, M Fegan, C Hayward, G Leonard, E Stackebrandt, L I Sly","doi":"10.1099/00207713-49-4-1681","DOIUrl":"https://doi.org/10.1099/00207713-49-4-1681","url":null,"abstract":"A new species of the genus Gluconacetobacter, for which the name Gluconacetobacter sacchari sp. nov. is proposed, was isolated from the leaf sheath of sugar cane and from the pink sugar-cane mealy bug, Saccharicoccus sacchari, found on sugar cane growing in Queensland and northern New South Wales, Australia. The nearest phylogenetic relatives in the alpha-subclass of the Proteobacteria are Gluconacetobacter liquefaciens and Gluconacetobacter diazotrophicus, which have 98.8-99.3% and 97.9-98.5% 16S rDNA sequence similarity, respectively, to members of Gluconacetobacter sacchari. On the basis of the phylogenetic positioning of the strains, DNA reassociation studies, phenotypic tests and the presence of the Q10 ubiquinone, this new species was assigned to the genus Gluconacetobacter. No single phenotypic characteristic is unique to the species, but the species can be differentiated phenotypically from closely related members of the acetic acid bacteria by growth in the presence of 0.01% malachite green, growth on 30% glucose, an inability to fix nitrogen and an inability to grow with the L-amino acids asparagine, glycine, glutamine, threonine and tryptophan when D-mannitol was supplied as the sole carbon and energy source. The type strain of this species is strain SRI 1794T (= DSM 12717T).","PeriodicalId":14428,"journal":{"name":"International journal of systematic bacteriology","volume":"49 Pt 4 ","pages":"1681-93"},"PeriodicalIF":0.0,"publicationDate":"1999-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1099/00207713-49-4-1681","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21414933","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 86

Phylogenetic evidence for reclassification of Calymmatobacterium granulomatis as Klebsiella granulomatis comb. nov. 肉芽肿Calymmatobacterium granulomatis重分类为Klebsiella granulomatis梳子的系统发育证据。11月。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1695

J S Carter, F J Bowden, I Bastian, G M Myers, K S Sriprakash, D J Kemp

引用次数: 90

Amycolatopsis thermoflava sp. nov., a novel soil actinomycete from Hainan Island, China. 海南一种新型土壤放线菌——热黄Amycolatopsis sp. nov.。

International journal of systematic bacteriology Pub Date : 1999-10-01 DOI: 10.1099/00207713-49-4-1369

J Chun, S B Kim, Y K Oh, C N Seong, D H Lee, K S Bae, K J Lee, S O Kang, Y C Hah, M Goodfellow

{"title":"Amycolatopsis thermoflava sp. nov., a novel soil actinomycete from Hainan Island, China.","authors":"J Chun, S B Kim, Y K Oh, C N Seong, D H Lee, K S Bae, K J Lee, S O Kang, Y C Hah, M Goodfellow","doi":"10.1099/00207713-49-4-1369","DOIUrl":"https://doi.org/10.1099/00207713-49-4-1369","url":null,"abstract":"A soil isolate, which had been assigned to the genus Nocardia, was shown to have properties consistent with its classification in the genus Amycolatopsis. An almost complete nucleotide sequence of the 16S rDNA of the strain was determined following cloning and sequencing of the amplified gene. The sequence was aligned with those available for members of the family Pseudonocardiaceae and related taxa and phylogenetic trees were inferred using three tree-making algorithms. The organism consistently formed a distinct monophyletic clade with the type strain of Amycolatopsis methanolica, but DNA-DNA relatedness data showed that the two strains belonged to distinct genomic species. The organism was also distinguished from the type strains of all validly described species of Amycolatopsis using a battery of phenotypic properties. The genotypic and phenotypic data show that the strain merits recognition as a new species of the genus Amycolatopsis. The name proposed for the new species is Amycolatopsis thermoflava sp. nov. The type strain is IFO 14333T.","PeriodicalId":14428,"journal":{"name":"International journal of systematic bacteriology","volume":"49 Pt 4 ","pages":"1369-73"},"PeriodicalIF":0.0,"publicationDate":"1999-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1099/00207713-49-4-1369","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21415212","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 35