Darren Sim Xuan Yu , Chong Kah Hui , Mohammad Rashedi Ismail-Fitry , Pankaj Koirala , Nilesh Nirmal , Mahmud Ab Rashid Nor-Khaizura
{"title":"High-pressure processing and heat treatment of Murrah buffalo milk: Comparative study on microbial changes during refrigerated storage","authors":"Darren Sim Xuan Yu , Chong Kah Hui , Mohammad Rashedi Ismail-Fitry , Pankaj Koirala , Nilesh Nirmal , Mahmud Ab Rashid Nor-Khaizura","doi":"10.1016/j.ijfoodmicro.2024.110926","DOIUrl":"10.1016/j.ijfoodmicro.2024.110926","url":null,"abstract":"<div><div>This study aims to evaluate the effect of high-pressure processing (HPP) (500 and 600 MPa for 3 min and 5 min) on the microbial changes of Murrah buffalo milk in comparison to heat treatment (72 °C for 15 s of holding time) during refrigerated storage of 28 days. The results indicated that the total plate count (TPC) of raw milk at day 0 was 5.5 ± 0.6 log<sub>10</sub> CFU/mL. At day 0, heat treatment lowered TPC to 3.9 ± 0.6, while HPP treatment was in the range of 4.1 ± 0.3 to 4.8 ± 0.6 log<sub>10</sub> CFU/mL. Similarly, lowered yeast and mold count and lactic acid bacteria were noted in heat- and HPP-treated milk samples compared to the control sample during refrigerated storage. There were no <em>Staphylococcus aureus</em> and <em>Escherichia coli</em> detected in heat and HPP-treated samples. Heat or HPP treatment at 600 MPa for 5 min significantly extended the shelf-life of Murrah buffalo milk for three weeks at the refrigerated storage. In addition, HPP treatment did not alter the pH, lightness (<em>L</em>* value), protein, or fat content of Murrah buffalo milk during refrigerated storage. Hence HPP at 600 MPa for 5 min could be a suitable alternative to conventional heat treatment.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110926"},"PeriodicalIF":5.0,"publicationDate":"2024-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142377917","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Katja Selby, François P. Douillard, Miia Lindström
{"title":"Genomic and phenotypic polymorphism of Clostridium botulinum Group II strain Beluga through laboratory domestication","authors":"Katja Selby, François P. Douillard, Miia Lindström","doi":"10.1016/j.ijfoodmicro.2024.110927","DOIUrl":"10.1016/j.ijfoodmicro.2024.110927","url":null,"abstract":"<div><div>Laboratory domestication is the result of genetic and physiological changes of organisms acquired during numerous passages <em>in vitro</em>. This phenomenon has been observed in bacteria as well as in higher organisms. In an effort to understand the impact of laboratory domestication on the foodborne pathogen <em>Clostridium botulinum</em> and related microbial food safety research, we investigated multiple spore stocks of <em>C. botulinum</em> Group II Beluga from our collection, as that is a widely applied model strain used in laboratories over decades. An acquired nutrient auxotrophy was confirmed as thymidine dependency using phenotypic microarrays. In parallel, whole-genome re-sequencing of all stocks revealed a mutation in <em>thyA</em> encoding thymidylate synthase essential for <em>de-novo</em> synthesis of dTMP from dUMP in the auxotrophic stocks. A <em>thyA</em>-deficient Beluga variant stock was successfully complemented by introducing an intact variant of <em>thyA</em> and thymidine prototrophy was restored, indicating that the thymidine auxotrophy was solely due to the presence of a SNP in <em>thyA</em>. Our data suggested that this mutation, deleterious under nutrient-poor growth conditions in a chemically defined medium, has been present and maintained in laboratory stocks for nearly 30 years. Yet, the mutation remained unidentified since receiving the strain, most likely due to routine use of culture conditions optimized for growth performance. This work pinpoints the need for careful monitoring of model strains extensively used in laboratory settings at both phenotypic and genomic level. In applications like food safety challenge tests, compromised strains could cause incorrect predictions and thereby have deleterious consequences. To mitigate the risk of acquiring mutations, we recommend keeping passage numbers of laboratory strains low and to avoid single-colony passaging. In addition, relevant strains should be subjected to regular WGS checks and physiological validation to exclude DNA mutations with potential negative impacts on research data integrity and reproducibility.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110927"},"PeriodicalIF":5.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142390425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Wenyi Ran , Peirui Yi , Ling Jiang, Yang Yu, Kai Zhong, Yanping Wu, Hong Gao
{"title":"Antibiofilm mechanism of 2R,3R-dihydromyricetin by targeting sortase A and its application against Staphylococcus aureus adhesion on eggshell","authors":"Wenyi Ran , Peirui Yi , Ling Jiang, Yang Yu, Kai Zhong, Yanping Wu, Hong Gao","doi":"10.1016/j.ijfoodmicro.2024.110925","DOIUrl":"10.1016/j.ijfoodmicro.2024.110925","url":null,"abstract":"<div><div>Biofilm formation of <em>Staphylococcus aureus</em> in food processing environments raises significant safety concerns, necessitating the development of new antibiofilm approaches for controlling <em>S. aureus</em> contamination. This study aimed to elucidate the antibiofilm mechanism of <em>2R</em>,<em>3R</em>-dihydromyricetin (DMY), a natural flavonoid, against <em>S. aureus</em> and evaluate its efficacy in reducing bacterial adhesion to eggshell. The results revealed that DMY was a potent inhibitor of <em>S. aureus</em> sortase A (SrtA) with an IC<sub>50</sub> of 73.43 μM, preventing bacterial adhesion to fibrinogen and subsequent biofilm formation. Fluorescence quenching assay and surface plasmon resonance analysis confirmed that DMY could directly bind to <em>S. aureus</em> SrtA. Notably, circular dichroism spectra demonstrated a conformational change in SrtA from α-helical to β-sheet structure upon DMY binding. Molecular dynamics simulation suggested that DMY bound to the catalytic pocket of <em>S. aureus</em> SrtA via hydrophobic interactions and hydrogen bonds. Furthermore, fluorescence microscopic observations further revealed that DMY attenuated the biofilm-related phenotype of SrtA by decreasing the anchoring of <em>S. aureus</em> protein A (SpA) onto cell wall. Importantly, pretreatment with 125 μg/mL DMY significantly reduced 1.14–1.75 log CFU/cm<sup>2</sup> of <em>S. aureus</em> adhered on eggshells. Overall, these findings highlight how specific targeting of SrtA by DMY inhibits the attachment stages of biofilm development in <em>S. aureus</em>, making it a promising candidate for a novel disinfectant against this pathogen in the food industry.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110925"},"PeriodicalIF":5.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142375432","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Application of a novel lytic phage to control enterotoxigenic Escherichia coli in dairy food matrices","authors":"Madhvi Chahar , Anuj Rana , Vinay Kumar Gupta , Anu Singh , Namita Singh","doi":"10.1016/j.ijfoodmicro.2024.110924","DOIUrl":"10.1016/j.ijfoodmicro.2024.110924","url":null,"abstract":"<div><div>A novel <em>Escherichia coli</em> phage designated as EC BD was isolated from cattle dung samples. Transmission electron microscopy demonstrated that the morphology of phage EC BD belongs to the family Myoviridae. The efficiency of plating (EOP) and scanning electron microscopy revealed the strong lytic activity of phage EC BD with a large burst size and a short latent period. Whole genome data analysis suggested that phage EC BD was inclined towards being completely lytic and revealed the absence of toxins, virulence and antibiotic resistance genes. Phylogenomic analysis of phage EC BD receptor binding proteins (RBPs) showed 74–100 % similarity with sixteen Enterobacter phages, representing their broad host range. The phage genome contains 262 ORFs, of which 107 displayed a unique pattern and additionally, the presence of a tRNA gene directed their fast replication and high stability. Comparative genome analysis suggested phage EC BD as a novel member of the genus <em>Duplodnaviria</em> and family Myoviridae. The efficiency of phage EC BD was determined in dairy food matrices (milk, cheese and paneer) artificially contaminated with enterotoxigenic <em>E. coli</em> strains ETEC H10407, ETEC K 12S and ETEC PB 176 with a significant reduction of 4.8, 6.0 and 5.3 log CFU/mL in milk and a substantial 4.9, 5.8 and 4.6 log CFU/mL reduction in cheese samples after 6 days at low storage temperature (4 °C); furthermore, within the similar conditions, paneer samples showed 4, 5.1 and 3.5 log CFU/mL reduction. EC BD phage treatment represents the complete eradication of three ETEC strains in liquid and semisolid dairy food matrices. This study suggested that phage EC BD might have potential as a biocontrol approach against ETEC foodborne infections.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110924"},"PeriodicalIF":5.0,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142346239","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maria Fiorella Mazzeo , Alida Sorrentino , Stefano Morandi , Houssam Abouloifa , Abdeslam Asehraou , Milena Brasca , Rosa Anna Siciliano
{"title":"Catalogue of surface proteins of Lactiplantibacillus plantarum strains of dairy and vegetable niches","authors":"Maria Fiorella Mazzeo , Alida Sorrentino , Stefano Morandi , Houssam Abouloifa , Abdeslam Asehraou , Milena Brasca , Rosa Anna Siciliano","doi":"10.1016/j.ijfoodmicro.2024.110922","DOIUrl":"10.1016/j.ijfoodmicro.2024.110922","url":null,"abstract":"<div><div><em>Lactiplantibacillus plantarum</em> (formerly <em>Lactobacillus plantarum</em>) exhibits relevant probiotic and technological features and is widely used in food industries, improving flavour, texture and organoleptic properties of fermented products. Cell-surface proteins have a key role in the molecular mechanisms responsible for healthy effects, being the first actors in the bacteria - host interactions. Proteins present on the surface of four <em>L. plantarum</em> strains (two isolated from vegetable matrices and two from dairy products) were identified by proteomics with the aim to gain a comprehensive picture of differences in protein profiles potentially related to the habitat of origin and specific properties of the analyzed strains. Results highlighted a more diversified pattern of surface proteins in strains from vegetable matrices compared to those from dairy matrices (>500 proteins <em>vs</em> about 200 proteins, respectively). The four strains shared a core of 143 proteins, while 445 were specifically present in strains from vegetable matrices and 26 were peculiar of strains from dairy origin. Sortase A, involved in adhesion, and choloylglycine hydrolase (bile salt hydrolase) were detected only in strains from vegetable matrices. The peculiar molecular functions of identified proteins suggested that these strains, and in particular <em>L. plantarum</em> S61, could have a significant probiotic and biotechnological potential.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110922"},"PeriodicalIF":5.0,"publicationDate":"2024-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142346240","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Chi Zhao , Petri Penttinen , Lingzi Zhang , Ling Dong , Fengju Zhang , Decong Liao , Suyi Zhang , Zhihua Li , Xiaoping Zhang
{"title":"A novel high-level phenyllactic acid fungal producer, Kodamaea ohmeri w5 screened from fermented broad bean-chili-paste","authors":"Chi Zhao , Petri Penttinen , Lingzi Zhang , Ling Dong , Fengju Zhang , Decong Liao , Suyi Zhang , Zhihua Li , Xiaoping Zhang","doi":"10.1016/j.ijfoodmicro.2024.110923","DOIUrl":"10.1016/j.ijfoodmicro.2024.110923","url":null,"abstract":"<div><div>Phenyllactic acid (PLA) is a broad-spectrum and efficient antimicrobial phenolic acid with potential applications in the food industry. Previous studies have demonstrated that fungi may be ideal producers of PLA. In this study, 15 fungi screened from Doubanjiang with the ability to produce PLA were first reported, including <em>Wickerhamomyces anomalus</em>, <em>Candida etchellsii</em>, <em>Candida parasitosis</em>, <em>Pichia kudriavzevii</em>, <em>Pichia membranifaciens</em> and <em>Kodamaea ohmeri</em>. Among them, <em>K. ohmeri</em> w5 had the highest PLA yield, producing up to 7160 mg/L PLA in shake flask fermentation with phenylalanine as substrate, which was more than ten times higher than the PLA produced by wild-type LAB under the similar conditions. In addition, <em>K. ohmeri</em> w5 was able to grow under extreme hypertonic conditions of 20 % NaCl (<em>w</em>/<em>v</em>) and 50 % glucose (w/v) as well as produce 57.12 ± 0.42 and 1609.22 ± 36.26 mg/L of PLA, respectively. Furthermore, the fermentation supernatant of <em>K. ohmeri</em> w5 demonstrated direct inhibitory effects against foodborne pathogenic microorganisms, <em>Aspergillus flavus</em> and <em>Bacillus cereus</em>. However, the inhibitory effect was weaker than that of the PLA standard at the same concentration. Further, 12,497,932 bp of w5 genome-wide information was obtained by sequencing and assembling. And its gene model was predicted based on transcriptomic evidence, which showed that a total of 7 genes related to PLA synthesis were identified in the w5 genome. Based on qRT-PCR, structure prediction, and molecular docking, a potentially key genetic resource from <em>K. ohmeri</em> w5 for PLA production was uncovered. The results will provide novel producers of PLA and its potential genetic resources.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110923"},"PeriodicalIF":5.0,"publicationDate":"2024-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142358709","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yanan Sun , Yiming Jia , Ke Wang , Songlei Wang , Baozhong Cui , Chao Mao , Xiaoying Guo , Yuxin Feng , Hongfei Fu , Xiangwei Chen , Yequn Wang , Zhenna Zhang , Yunyang Wang
{"title":"The exploration of pasteurization processes and mechanisms of inactivation of Bacillus cereus ATCC 14579 using radio frequency energy","authors":"Yanan Sun , Yiming Jia , Ke Wang , Songlei Wang , Baozhong Cui , Chao Mao , Xiaoying Guo , Yuxin Feng , Hongfei Fu , Xiangwei Chen , Yequn Wang , Zhenna Zhang , Yunyang Wang","doi":"10.1016/j.ijfoodmicro.2024.110919","DOIUrl":"10.1016/j.ijfoodmicro.2024.110919","url":null,"abstract":"<div><div>Radio frequency (RF) heating has been utilized to investigate sterilization techniques, but the mechanism of sterilization via RF heating, particularly on <em>Bacillus cereus</em> (<em>B. cereus</em>), has not been thoroughly examined. In this paper, sterilization processes and potential bactericidal mechanisms of <em>B. cereus</em> using RF were investigated. The best heating and sterilization efficiency was achieved at (Electrode gap 130 mm, conductivity of bacterial suspension 0.1 S/m, volume of bacterial suspension 40 mL). Heating a suspension of <em>B. cereus</em> to 90 °C in 80 s using RF reduced the number of viable bacteria by 4.87 logarithms. At the cellular level, there was a significant leakage of nucleic acids and proteins from the bacterial cells. Additionally, the integrity of the cell membrane was severely damaged, with a decrease in ATP concentration of 2.08 mM, Na, K-ATPase activity to 10.7 (U/10<sup>9</sup> cells), and Ca, Mg-ATPase activity to 11.6 (U/10<sup>9</sup> cells). At the molecular level, transcriptomics analysis showed that RF heating of <em>B. cereus</em> to 65 °C produced 650 more differentially expressed genes (DEGs) compared with RF heating to 45 °C. The GO annotation analysis indicated that the majority of differentially expressed genes (DEGs) were predominantly associated with cellular components. KEGG metabolic analysis showed enrichment in microbial metabolism in diverse environments, etc. This study investigated the potential bactericidal mechanism of <em>B. cereus</em> using RF, and provided some theoretical basis for the research of the sterilization of <em>B. cereus</em>.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110919"},"PeriodicalIF":5.0,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142315183","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yuxuan Guan , Yanhua Cui , Xiaojun Qu , Baolei Li , Lanwei Zhang
{"title":"Post-acidification of fermented milk and its molecular regulatory mechanism","authors":"Yuxuan Guan , Yanhua Cui , Xiaojun Qu , Baolei Li , Lanwei Zhang","doi":"10.1016/j.ijfoodmicro.2024.110920","DOIUrl":"10.1016/j.ijfoodmicro.2024.110920","url":null,"abstract":"<div><div>The fermented milk products with lactic acid bacteria (LAB) are widely accepted by consumers. During the chilled-chain transportation and storage, LAB in the product keep producing lactic acid, and this will lead to post-acidification, which can affect the flavor, consumer acceptance and even shelf-life of the product. LAB is the determining factor affecting post-acidification. The acid production pathway in LAB and methods inhibiting post-acidification received widespread attention. This review will focus on the post-acidification from the perspective of fermentation starters, including acid production pathway in LAB, main factors and key enzymes affecting post-acidification. <em>Lactobacillus delbrueckii</em> subsp. <em>bulgaricus</em> is a key bacterial species responsible for post acidification in the fermented milk products. The different species and strains presented various differences in process like acid production, acid resistance and post-acidification. Furthermore, multiple factors, such as milk composition, fermentation temperature, and homogenization, also can influence post-acidification. Lactose transport and utilization pathways, as well as its subsequent products metabolic pathway directly influence the post-acidification. F<sub>0</sub>F<sub>1</sub>-ATPase, β-galactosidase, and lactate dehydrogenase are recognized as important enzymes related to post-acidification. The degree of post-acidification is mainly related to the acid production and acid resistance abilities of the fermentation starters, so the key enzymes related to post-acidification are mostly taking part in these two capacities. Recently, some new post-acidification related biomarker genes were found, providing a reference adjusting post-acidification without affecting fermentation rate and bacteria viability. To clarify the post-acidification mechanism at the molecular level will help control post- acidification.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110920"},"PeriodicalIF":5.0,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142310479","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Novel insights into biofilm formation and the key differentially expressed genes in Yersinia enterocolitica from meat: Implications for food safety and disease prevention","authors":"Xiuqin Lou , Yue Wu , Zongzong Chen , Qian Zhang , Xiao Xiao , Zhiguo Fang","doi":"10.1016/j.ijfoodmicro.2024.110914","DOIUrl":"10.1016/j.ijfoodmicro.2024.110914","url":null,"abstract":"<div><p><em>Yersinia enterocolitica</em> is an important foodborne pathogen that can cause a zoonotic disease known as yersiniosis, which causes symptoms such as acute diarrhea, mesenteric adenitis, terminal ileum inflammation, pseudo appendicitis, sepsis, and other complications. The mechanism of biofilm formation in <em>Y. enterocolitica</em> remains poorly understood, with limited research available on this topic. This study systematically examined the distribution characteristics and biofilm formation ability of <em>Y. enterocolitica</em> isolated from poultry and livestock related samples. Analysis of food samples collected indicated significant presence of <em>Y. enterocolitica</em> (207/670, 30.9 %), particularly in frozen duck meat (7/11, 63.6 %). Majority of the isolated strains did not demonstrate biofilm-forming ability (52.7 %), while a notable percentage exhibited moderate (6.8 %) to strong (11.6 %) biofilm-forming ability. Additionally, a significant percentage of strains (16/207, 7.7 %) displayed extremely high optical density/cut-off OD (OD/ODC) ratios (the average OD value of each sample divided by the average OD value of the negative controls of each 96-well plate plus 3 standard deviations) (exceeding 10). Time-course analysis of biofilm formation in 10 isolates revealed three distinct patterns: (i) rapid increase from 6 h to 12 h, with gradual peak between 48 and 72 h followed by a slight decline and stabilization; (ii) little biofilm formation at 24 h with a gradual increase up to 96 h, maintaining this level until 120 h; and (iii) complete absence of biofilm formation throughout the experiment. Subsequent examination of differentially expressed genes (DEGs) in planktonic cells and biofilms of two strains with distinct biofilm formation capabilities identified seven metabolic pathways, including ribosome, photosynthesis, fatty acid degradation, valine, leucine, and isoleucine degradation, as well as pinene, camphor, and geraniol degradation. Significantly elevated expression levels of genes associated with flagellar assembly, bacterial chemotaxis, and quorum sensing (partially) were observed exclusively in planktonic cells of the selected strain with stronger biofilm-forming ability, implying that the heightened expression of flagellar assembly and bacterial chemotaxis-related genes is an important but not sole determinant of biofilm formation. The study contributes to the elucidation of the underlying mechanisms governing biofilm formation in <em>Y. enterocolitica</em> and may offer valuable insights for the advancement of novel food safety strategies.</p></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110914"},"PeriodicalIF":5.0,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142272163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mariana Barboza Vinha , Larissa Bernardino Moro , Inorbert de Melo Lima , Maristela da Silva do Nascimento , Giovanna Pinto Pires , Jairo Pinto de Oliveira , Servio Tulio Alves Cassini
{"title":"Salmonella in black pepper (Piper nigrum): From farm to processing","authors":"Mariana Barboza Vinha , Larissa Bernardino Moro , Inorbert de Melo Lima , Maristela da Silva do Nascimento , Giovanna Pinto Pires , Jairo Pinto de Oliveira , Servio Tulio Alves Cassini","doi":"10.1016/j.ijfoodmicro.2024.110921","DOIUrl":"10.1016/j.ijfoodmicro.2024.110921","url":null,"abstract":"<div><div>Contamination of black pepper (<em>Piper nigrum</em>) with <em>Salmonella</em> is a frequent problem in retail and imported shipments. However, there is scarce information about the prevalence of the pathogen in the initial stages of black pepper production chain. This study sought to bridge this gap in research by determining the prevalence, as well as quantifying, and identifying the main <em>Salmonella</em> serovars present during black pepper primary production and processing. Black pepper (233) and environmental (175) samples were collected from farms (354) and processing plants (54) in Espirito Santo, Brazil. The pathogen was detected in soil (16.7 %), drying waste (20.4 %), fallen berries (3.7 %), threshed berries (14.3 %), and dried peppercorns (22.2 %) collected from farms. <em>Salmonella</em> was also detected in samples of raw material (11.1 %), export products (16.7 %), and processing waste (16.7 %) collected from processing plants. A total of 12 serotypes were identified, and <em>Salmonella</em> Javiana showed the highest prevalence (38.8 %). According to the results, contamination occurring in the post-harvest phase is not eliminated or reduced during processing. Therefore, the adoption of good agricultural and manufacturing practices, supported by hazard analysis and critical control points (HACCP), is crucial to mitigate this kind of contamination. These practices should be combined with decontamination treatments to ensure the safety of the final product.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"426 ","pages":"Article 110921"},"PeriodicalIF":5.0,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142322983","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}