Human molecular genetics最新文献

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Investigation in yeast of novel variants in mitochondrial aminoacyl-tRNA synthetases WARS2, NARS2, and RARS2 genes associated with mitochondrial diseases. 在酵母中研究与线粒体疾病相关的线粒体氨基酰-tRNA合成酶 WARS2、NARS2 和 RARS2 基因的新型变体。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-09-03 DOI: 10.1093/hmg/ddae104
Sonia Figuccia, Rossella Izzo, Andrea Legati, Alessia Nasca, Paola Goffrini, Daniele Ghezzi, Camilla Ceccatelli Berti
{"title":"Investigation in yeast of novel variants in mitochondrial aminoacyl-tRNA synthetases WARS2, NARS2, and RARS2 genes associated with mitochondrial diseases.","authors":"Sonia Figuccia, Rossella Izzo, Andrea Legati, Alessia Nasca, Paola Goffrini, Daniele Ghezzi, Camilla Ceccatelli Berti","doi":"10.1093/hmg/ddae104","DOIUrl":"10.1093/hmg/ddae104","url":null,"abstract":"<p><p>Aminoacyl-transfer RiboNucleic Acid synthetases (ARSs) are essential enzymes that catalyze the attachment of each amino acid to their cognate tRNAs. Mitochondrial ARSs (mtARSs), which ensure protein synthesis within the mitochondria, are encoded by nuclear genes and imported into the organelle after translation in the cytosol. The extensive use of next generation sequencing (NGS) has resulted in an increasing number of variants in mtARS genes being identified and associated with mitochondrial diseases. The similarities between yeast and human mitochondrial translation machineries make yeast a good model to quickly and efficiently evaluate the effect of variants in mtARS genes. Genetic screening of patients with a clinical suspicion of mitochondrial disorders through a customized gene panel of known disease-genes, including all genes encoding mtARSs, led to the identification of missense variants in WARS2, NARS2 and RARS2. Most of them were classified as Variant of Uncertain Significance. We exploited yeast models to assess the functional consequences of the variants found in these genes encoding mitochondrial tryptophanyl-tRNA, asparaginyl-tRNA, and arginyl-tRNA synthetases, respectively. Mitochondrial phenotypes such as oxidative growth, oxygen consumption rate, Cox2 steady-state level and mitochondrial protein synthesis were analyzed in yeast strains deleted in MSW1, SLM5, and MSR1 (the yeast orthologues of WARS2, NARS2 and RARS2, respectively), and expressing the wild type or the mutant alleles. Pathogenicity was confirmed for most variants, leading to their reclassification as Likely Pathogenic. Moreover, the beneficial effects observed after asparagine and arginine supplementation in the growth medium suggest them as a potential therapeutic approach.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":"33 18","pages":"1630-1641"},"PeriodicalIF":3.1,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142125580","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The expression of congenital Shoc2 variants induces AKT-dependent crosstalk activation of the ERK1/2 pathway. 先天性 Shoc2 变体的表达会诱导 AKT 依赖性串联激活 ERK1/2 通路。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-09-03 DOI: 10.1093/hmg/ddae100
Patricia G Wilson, Lina Abdelmoti, Tianyan Gao, Emilia Galperin
{"title":"The expression of congenital Shoc2 variants induces AKT-dependent crosstalk activation of the ERK1/2 pathway.","authors":"Patricia G Wilson, Lina Abdelmoti, Tianyan Gao, Emilia Galperin","doi":"10.1093/hmg/ddae100","DOIUrl":"10.1093/hmg/ddae100","url":null,"abstract":"<p><p>The Shoc2 scaffold protein is crucial in transmitting signals within the Epidermal Growth Factor Receptor (EGFR)-mediated Extracellular signal-Regulated Kinase (ERK1/2) pathway. While the significance of Shoc2 in this pathway is well-established, the precise mechanisms through which Shoc2 governs signal transmission remain to be fully elucidated. Hereditary variants in Shoc2 are responsible for Noonan Syndrome with Loose anagen Hair (NSLH). However, due to the absence of known enzymatic activity in Shoc2, directly assessing how these variants affect its function is challenging. ERK1/2 phosphorylation is used as a primary parameter of Shoc2 function, but the impact of Shoc2 mutants on the pathway activation is unclear. This study investigates how the NSLH-associated Shoc2 variants influence EGFR signals in the context of the ERK1/2 and AKT downstream signaling pathways. We show that when the ERK1/2 pathway is a primary signaling pathway activated downstream of EGFR, Shoc2 variants cannot upregulate ERK1/2 phosphorylation to the level of the WT Shoc2. Yet, when the AKT and ERK1/2 pathways were activated, in cells expressing Shoc2 variants, ERK1/2 phosphorylation was higher than in cells expressing WT Shoc2. In cells expressing the Shoc2 NSLH mutants, we found that the AKT signaling pathway triggers the PAK activation, followed by phosphorylation of Raf-1/MEK1/2 and activation of the ERK1/2 signaling axis. Hence, our studies reveal a previously unrecognized feedback regulation downstream of the EGFR and provide additional evidence for the role of Shoc2 as a \"gatekeeper\" in controlling the selection of downstream effectors within the EGFR signaling network.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1592-1604"},"PeriodicalIF":3.1,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11373329/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141330779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The maternal protein NLRP5 stabilizes UHRF1 in the cytoplasm: implication for the pathogenesis of multilocus imprinting disturbance. 母体蛋白NLRP5在细胞质中稳定UHRF1:与多焦点印记紊乱的发病机制有关。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-09-03 DOI: 10.1093/hmg/ddae096
Motoko Unoki, Shuhei Uemura, Akihiro Fujimoto, Hiroyuki Sasaki
{"title":"The maternal protein NLRP5 stabilizes UHRF1 in the cytoplasm: implication for the pathogenesis of multilocus imprinting disturbance.","authors":"Motoko Unoki, Shuhei Uemura, Akihiro Fujimoto, Hiroyuki Sasaki","doi":"10.1093/hmg/ddae096","DOIUrl":"10.1093/hmg/ddae096","url":null,"abstract":"<p><p>We have recently discovered that the so-called subcortical maternal complex (SCMC) proteins composing of cytoplasmic lattices are destabilized in Uhrf1 knockout murine fully grown oocytes (FGOs). Here we report that human UHRF1 interacts with human NLRP5 and OOEP, which are core components of the SCMC. Moreover, NLRP5 and OOEP interact with DPPA3, which is an essential factor for exporting UHRF1 from the nucleus to the cytoplasm in oocytes. We identify that NLRP5, not OOEP, stabilizes UHRF1 protein in the cytoplasm utilizing specifically engineered cell lines mimicking UHRF1 status in oocytes and preimplantation embryos. Further, UHRF1 is destabilized both in the cytoplasm and nucleus of Nlrp5 knockout murine FGOs. Since pathogenic variants of the SCMC components frequently cause multilocus imprinting disturbance and UHRF1 is essential for maintaining CpG methylation of imprinting control regions during preimplantation development, our results suggest possible pathogenesis behind the disease, which has been a long-standing mystery.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1575-1583"},"PeriodicalIF":3.1,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11373322/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141310563","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Extended haplotype with rs41524547-G defines the ancestral origin of SCA10. 带有 rs41524547-G 的扩展单倍型定义了 SCA10 的祖先起源。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-09-03 DOI: 10.1093/hmg/ddae092
Karen N McFarland, Anjana Tiwari, Vera Hashem, Linwei Zhang, Desmond Zeng, Justin Vincent, Maria J Arredondo, Kristy L Johnson, Shi Rui Gan, Ichiro Yabe, Laurits Skov, Astrid Rasmussen, Tetsuo Ashizawa
{"title":"Extended haplotype with rs41524547-G defines the ancestral origin of SCA10.","authors":"Karen N McFarland, Anjana Tiwari, Vera Hashem, Linwei Zhang, Desmond Zeng, Justin Vincent, Maria J Arredondo, Kristy L Johnson, Shi Rui Gan, Ichiro Yabe, Laurits Skov, Astrid Rasmussen, Tetsuo Ashizawa","doi":"10.1093/hmg/ddae092","DOIUrl":"10.1093/hmg/ddae092","url":null,"abstract":"<p><p>Spinocerebellar ataxia type 10 (SCA10) is a rare autosomal dominant ataxia caused by a large expansion of the (ATTCT)n repeat in ATXN10. SCA10 was described in Native American and Asian individuals which prompted a search for an expanded haplotype to confirm a common ancestral origin for the expansion event. All patients with SCA10 expansions in our cohort share a single haplotype defined at the 5'-end by the minor allele of rs41524547, located ~35 kb upstream of the SCA10 expansion. Intriguingly, rs41524547 is located within the miRNA gene, MIR4762, within its DROSHA cleavage site and just outside the seed sequence for mir4792-5p. The world-wide frequency of rs41524547-G is less than 5% and found almost exclusively in the Americas and East Asia-a geographic distribution that mirrors reported SCA10 cases. We identified rs41524547-G(+) DNA from the 1000 Genomes/International Genome Sample Resource and our own general population samples and identified SCA10 repeat expansions in up to 25% of these samples. The reduced penetrance of these SCA10 expansions may be explained by a young (pre-onset) age at sample collection, a small repeat size, purity of repeat units, or the disruption of miR4762-5p function. We conclude that rs41524547-G is the most robust at-risk SNP allele for SCA10, is useful for screening of SCA10 expansions in population genetics studies and provides the most compelling evidence to date for a single, prehistoric origin of SCA10 expansions sometime prior to or during the migration of individuals across the Bering Land Bridge into the Americas.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1567-1574"},"PeriodicalIF":3.1,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141237826","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Deletion of Trps1 regulatory elements recapitulates postnatal hip joint abnormalities and growth retardation of Trichorhinophalangeal syndrome in mice. Trps1调控元件的缺失可重现小鼠出生后髋关节异常和三指并指综合征的生长迟缓。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-09-03 DOI: 10.1093/hmg/ddae102
Naoya Saeki, Chizuko Inui-Yamamoto, Yuki Ikeda, Rinna Kanai, Kenji Hata, Shousaku Itoh, Toshihiro Inubushi, Shigehisa Akiyama, Shinsuke Ohba, Makoto Abe
{"title":"Deletion of Trps1 regulatory elements recapitulates postnatal hip joint abnormalities and growth retardation of Trichorhinophalangeal syndrome in mice.","authors":"Naoya Saeki, Chizuko Inui-Yamamoto, Yuki Ikeda, Rinna Kanai, Kenji Hata, Shousaku Itoh, Toshihiro Inubushi, Shigehisa Akiyama, Shinsuke Ohba, Makoto Abe","doi":"10.1093/hmg/ddae102","DOIUrl":"10.1093/hmg/ddae102","url":null,"abstract":"<p><p>Trichorhinophalangeal syndrome (TRPS) is a genetic disorder caused by point mutations or deletions in the gene-encoding transcription factor TRPS1. TRPS patients display a range of skeletal dysplasias, including reduced jaw size, short stature, and a cone-shaped digit epiphysis. Certain TRPS patients experience early onset coxarthrosis that leads to a devastating drop in their daily activities. The etiologies of congenital skeletal abnormalities of TRPS were revealed through the analysis of Trps1 mutant mouse strains. However, early postnatal lethality in Trps1 knockout mice has hampered the study of postnatal TRPS pathology. Here, through epigenomic analysis we identified two previously uncharacterized candidate gene regulatory regions in the first intron of Trps1. We deleted these regions, either individually or simultaneously, and examined their effects on skeletal morphogenesis. Animals that were deleted individually for either region displayed only modest phenotypes. In contrast, the Trps1Δint/Δint mouse strain with simultaneous deletion of both genomic regions exhibit postnatal growth retardation. This strain displayed delayed secondary ossification center formation in the long bones and misshaped hip joint development that resulted in acetabular dysplasia. Reducing one allele of the Trps1 gene in Trps1Δint mice resulted in medial patellar dislocation that has been observed in some patients with TRPS. Our novel Trps1 hypomorphic strain recapitulates many postnatal pathologies observed in human TRPS patients, thus positioning this strain as a useful animal model to study postnatal TRPS pathogenesis. Our observations also suggest that Trps1 gene expression is regulated through several regulatory elements, thus guaranteeing robust expression maintenance in skeletal cells.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1618-1629"},"PeriodicalIF":3.1,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141426742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multi-ancestry polygenic risk scores for venous thromboembolism. 静脉血栓栓塞多基因风险评分。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-09-03 DOI: 10.1093/hmg/ddae097
Yon Ho Jee, Florian Thibord, Alicia Dominguez, Corriene Sept, Kristin Boulier, Vidhya Venkateswaran, Yi Ding, Tess Cherlin, Shefali Setia Verma, Valeria Lo Faro, Traci M Bartz, Anne Boland, Jennifer A Brody, Jean-Francois Deleuze, Joseph Emmerich, Marine Germain, Andrew D Johnson, Charles Kooperberg, Pierre-Emmanuel Morange, Nathan Pankratz, Bruce M Psaty, Alexander P Reiner, David M Smadja, Colleen M Sitlani, Pierre Suchon, Weihong Tang, David-Alexandre Trégouët, Sebastian Zöllner, Bogdan Pasaniuc, Scott M Damrauer, Serena Sanna, Harold Snieder, Christopher Kabrhel, Nicholas L Smith, Peter Kraft
{"title":"Multi-ancestry polygenic risk scores for venous thromboembolism.","authors":"Yon Ho Jee, Florian Thibord, Alicia Dominguez, Corriene Sept, Kristin Boulier, Vidhya Venkateswaran, Yi Ding, Tess Cherlin, Shefali Setia Verma, Valeria Lo Faro, Traci M Bartz, Anne Boland, Jennifer A Brody, Jean-Francois Deleuze, Joseph Emmerich, Marine Germain, Andrew D Johnson, Charles Kooperberg, Pierre-Emmanuel Morange, Nathan Pankratz, Bruce M Psaty, Alexander P Reiner, David M Smadja, Colleen M Sitlani, Pierre Suchon, Weihong Tang, David-Alexandre Trégouët, Sebastian Zöllner, Bogdan Pasaniuc, Scott M Damrauer, Serena Sanna, Harold Snieder, Christopher Kabrhel, Nicholas L Smith, Peter Kraft","doi":"10.1093/hmg/ddae097","DOIUrl":"10.1093/hmg/ddae097","url":null,"abstract":"<p><p>Venous thromboembolism (VTE) is a significant contributor to morbidity and mortality, with large disparities in incidence rates between Black and White Americans. Polygenic risk scores (PRSs) limited to variants discovered in genome-wide association studies in European-ancestry samples can identify European-ancestry individuals at high risk of VTE. However, there is limited evidence on whether high-dimensional PRS constructed using more sophisticated methods and more diverse training data can enhance the predictive ability and their utility across diverse populations. We developed PRSs for VTE using summary statistics from the International Network against Venous Thrombosis (INVENT) consortium genome-wide association studies meta-analyses of European- (71 771 cases and 1 059 740 controls) and African-ancestry samples (7482 cases and 129 975 controls). We used LDpred2 and PRS-CSx to construct ancestry-specific and multi-ancestry PRSs and evaluated their performance in an independent European- (6781 cases and 103 016 controls) and African-ancestry sample (1385 cases and 12 569 controls). Multi-ancestry PRSs with weights tuned in European-ancestry samples slightly outperformed ancestry-specific PRSs in European-ancestry test samples (e.g. the area under the receiver operating curve [AUC] was 0.609 for PRS-CSx_combinedEUR and 0.608 for PRS-CSxEUR [P = 0.00029]). Multi-ancestry PRSs with weights tuned in African-ancestry samples also outperformed ancestry-specific PRSs in African-ancestry test samples (PRS-CSxAFR: AUC = 0.58, PRS-CSx_combined AFR: AUC = 0.59), although this difference was not statistically significant (P = 0.34). The highest fifth percentile of the best-performing PRS was associated with 1.9-fold and 1.68-fold increased risk for VTE among European- and African-ancestry subjects, respectively, relative to those in the middle stratum. These findings suggest that the multi-ancestry PRS might be used to improve performance across diverse populations to identify individuals at highest risk for VTE.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1584-1591"},"PeriodicalIF":3.1,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11373328/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141327466","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Reduced levels of MRE11 cause disease phenotypes distinct from ataxia telangiectasia-like disorder. MRE11 水平降低导致的疾病表型与共济失调毛细血管扩张症样障碍不同。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-09-03 DOI: 10.1093/hmg/ddae101
Andrea J Hartlerode, Ahmed M Mostafa, Steven K Orban, Rachel Benedeck, Koral Campbell, Mark J Hoenerhoff, David O Ferguson, JoAnn M Sekiguchi
{"title":"Reduced levels of MRE11 cause disease phenotypes distinct from ataxia telangiectasia-like disorder.","authors":"Andrea J Hartlerode, Ahmed M Mostafa, Steven K Orban, Rachel Benedeck, Koral Campbell, Mark J Hoenerhoff, David O Ferguson, JoAnn M Sekiguchi","doi":"10.1093/hmg/ddae101","DOIUrl":"10.1093/hmg/ddae101","url":null,"abstract":"<p><p>The MRE11/RAD50/NBS1 (MRN) complex plays critical roles in cellular responses to DNA double-strand breaks. MRN is involved in end binding and processing, and it also induces cell cycle checkpoints by activating the ataxia-telangiectasia mutated (ATM) protein kinase. Hypomorphic pathogenic variants in the MRE11, RAD50, or NBS1 genes cause autosomal recessive genome instability syndromes featuring variable degrees of dwarfism, neurological defects, anemia, and cancer predisposition. Disease-associated MRN alleles include missense and nonsense variants, and many cause reduced protein levels of the entire MRN complex. However, the dramatic variability in the disease manifestation of MRN pathogenic variants is not understood. We sought to determine if low protein levels are a significant contributor to disease sequelae and therefore generated a transgenic murine model expressing MRE11 at low levels. These mice display dramatic phenotypes including small body size, severe anemia, and impaired DNA repair. We demonstrate that, distinct from ataxia telangiectasia-like disorder caused by MRE11 pathogenic missense or nonsense variants, mice and cultured cells expressing low MRE11 levels do not display the anticipated defects in ATM activation. Our findings indicate that ATM signaling can be supported by very low levels of the MRN complex and imply that defective ATM activation results from perturbation of MRN function caused by specific hypomorphic disease mutations. These distinct phenotypic outcomes underline the importance of understanding the impact of specific pathogenic MRE11 variants, which may help direct appropriate early surveillance for patients with these complicated disorders in a clinical setting.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1605-1617"},"PeriodicalIF":3.1,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11373340/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141418666","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PSMC5 insufficiency and P320R mutation impair proteasome function. PSMC5不足和P320R突变会损害蛋白酶体的功能。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-08-18 DOI: 10.1093/hmg/ddae085
Zhong-Qiu Yu, Jenny Carmichael, Galen A Collins, Maria Daniela D'Agostino, Mathieu Lessard, Helen V Firth, Pooja Harijan, Andrew E Fry, John Dean, Jiuchun Zhang, Usha Kini, Alfred L Goldberg, David C Rubinsztein
{"title":"PSMC5 insufficiency and P320R mutation impair proteasome function.","authors":"Zhong-Qiu Yu, Jenny Carmichael, Galen A Collins, Maria Daniela D'Agostino, Mathieu Lessard, Helen V Firth, Pooja Harijan, Andrew E Fry, John Dean, Jiuchun Zhang, Usha Kini, Alfred L Goldberg, David C Rubinsztein","doi":"10.1093/hmg/ddae085","DOIUrl":"10.1093/hmg/ddae085","url":null,"abstract":"<p><p>The ubiquitin-proteasome system mediates the degradation of a wide variety of proteins. Proteasome dysfunction is associated with neurodegenerative diseases and neurodevelopmental disorders in humans. Here we identified mutations in PSMC5, an AAA ATPase subunit of the proteasome 19S regulatory particle, in individuals with neurodevelopmental disorders, which were initially considered as variants of unknown significance. We have now found heterozygotes with the following mutations: P320R (6 individuals), R325W, Q160A, and one nonsense mutation at Q69. We focused on understanding the functional consequence of PSMC5 insufficiency and the P320R mutation in cells and found that both impair proteasome function and activate apoptosis. Interestingly, the P320R mutation impairs proteasome function by weakening the association between the 19S regulatory particle and the 20S core particle. Our study supports that proteasome dysfunction is the pathogenic cause of neurodevelopmental disorders in individuals carrying PSMC5 variants.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1506-1523"},"PeriodicalIF":3.1,"publicationDate":"2024-08-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11336065/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141081171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Single nuclei RNA-seq reveals a medium spiny neuron glutamate excitotoxicity signature prior to the onset of neuronal death in an ovine Huntington's disease model. 在绵羊亨廷顿氏病模型中,单核 RNA-seq 发现了中棘神经元在神经元死亡开始前的谷氨酸兴奋毒性特征。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-08-18 DOI: 10.1093/hmg/ddae087
Andrew Jiang, Linya You, Renee R Handley, Victoria Hawkins, Suzanne J Reid, Jessie C Jacobsen, Stefano Patassini, Skye R Rudiger, Clive J Mclaughlan, Jennifer M Kelly, Paul J Verma, C Simon Bawden, James F Gusella, Marcy E MacDonald, Henry J Waldvogel, Richard L M Faull, Klaus Lehnert, Russell G Snell
{"title":"Single nuclei RNA-seq reveals a medium spiny neuron glutamate excitotoxicity signature prior to the onset of neuronal death in an ovine Huntington's disease model.","authors":"Andrew Jiang, Linya You, Renee R Handley, Victoria Hawkins, Suzanne J Reid, Jessie C Jacobsen, Stefano Patassini, Skye R Rudiger, Clive J Mclaughlan, Jennifer M Kelly, Paul J Verma, C Simon Bawden, James F Gusella, Marcy E MacDonald, Henry J Waldvogel, Richard L M Faull, Klaus Lehnert, Russell G Snell","doi":"10.1093/hmg/ddae087","DOIUrl":"10.1093/hmg/ddae087","url":null,"abstract":"<p><p>Huntington's disease (HD) is a neurodegenerative genetic disorder caused by an expansion in the CAG repeat tract of the huntingtin (HTT) gene resulting in behavioural, cognitive, and motor defects. Current knowledge of disease pathogenesis remains incomplete, and no disease course-modifying interventions are in clinical use. We have previously reported the development and characterisation of the OVT73 transgenic sheep model of HD. The 73 polyglutamine repeat is somatically stable and therefore likely captures a prodromal phase of the disease with an absence of motor symptomatology even at 5-years of age and no detectable striatal cell loss. To better understand the disease-initiating events we have undertaken a single nuclei transcriptome study of the striatum of an extensively studied cohort of 5-year-old OVT73 HD sheep and age matched wild-type controls. We have identified transcriptional upregulation of genes encoding N-methyl-D-aspartate (NMDA), α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) and kainate receptors in medium spiny neurons, the cell type preferentially lost early in HD. Further, we observed an upregulation of astrocytic glutamate uptake transporters and medium spiny neuron GABAA receptors, which may maintain glutamate homeostasis. Taken together, these observations support the glutamate excitotoxicity hypothesis as an early neurodegeneration cascade-initiating process but the threshold of toxicity may be regulated by several protective mechanisms. Addressing this biochemical defect early may prevent neuronal loss and avoid the more complex secondary consequences precipitated by cell death.</p>","PeriodicalId":13070,"journal":{"name":"Human molecular genetics","volume":" ","pages":"1524-1539"},"PeriodicalIF":3.1,"publicationDate":"2024-08-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11336116/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141081174","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of different promoters to improve AAV vector-mediated gene therapy for neuronopathic Gaucher disease. 比较不同的启动子,改进 AAV 向量介导的神经病变性戈谢病基因疗法。
IF 3.1 2区 生物学
Human molecular genetics Pub Date : 2024-08-18 DOI: 10.1093/hmg/ddae081
Giulia Massaro, Amy F Geard, Hemanth R Nelvagal, Katrina Gore, Nadine K Clemo, Simon N Waddington, Ahad A Rahim
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引用次数: 0
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