Cytometry Part B: Clinical Cytometry最新文献

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Utility of leukocyte-associated immunoglobulin-like receptor-1 (CD305) in flow cytometric detection of minimal bone marrow involvement by B-cell non-Hodgkin lymphoma 白细胞相关免疫球蛋白样受体-1(CD305)在流式细胞术检测 B 细胞非霍奇金淋巴瘤骨髓微小受累情况中的实用性
IF 2.3 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-06-21 DOI: 10.1002/cyto.b.22193
Anu Singh, Jagruti Patil, Sitaram G. Ghogale, Nilesh Deshpande, Karishma Girase, Navami Shetye, Sweta Rajpal, Gaurav Chatterjee, Nikhil Patkar, Disha Jain, Sridhar Epari, Tanuja Shet, Sumeet Gujral, Papagudi G. Subramanian, Prashant R. Tembhare
{"title":"Utility of leukocyte-associated immunoglobulin-like receptor-1 (CD305) in flow cytometric detection of minimal bone marrow involvement by B-cell non-Hodgkin lymphoma","authors":"Anu Singh,&nbsp;Jagruti Patil,&nbsp;Sitaram G. Ghogale,&nbsp;Nilesh Deshpande,&nbsp;Karishma Girase,&nbsp;Navami Shetye,&nbsp;Sweta Rajpal,&nbsp;Gaurav Chatterjee,&nbsp;Nikhil Patkar,&nbsp;Disha Jain,&nbsp;Sridhar Epari,&nbsp;Tanuja Shet,&nbsp;Sumeet Gujral,&nbsp;Papagudi G. Subramanian,&nbsp;Prashant R. Tembhare","doi":"10.1002/cyto.b.22193","DOIUrl":"10.1002/cyto.b.22193","url":null,"abstract":"<p>Multicolor flow cytometry (MFC) is crucial in detecting occult or minimal bone marrow (BM) involvement by non-Hodgkin lymphomas (NHL), which may not be detected using trephine biopsy or imaging studies. Detection of low-level BM involvement can be challenging without definite immunophenotypic aberrancies. We studied the utility of CD305 in MFC detection of minimal BM involvement by B-NHL, especially in the absence of aberrancies by commonly used markers. The study included 1084 consecutive BM samples submitted for the staging of B-NHLs (excluding CLL) over two years. Samples were studied for morphological, immunophenotypic, and histopathological assessment. MFC studies were performed using 10–13 color MFC, including CD305-antibody (clone, DX26<b>)</b>. Minimal BM involvement was defined with a cutoff of ≤10% lymphoma cells in viable cells on MFC assessment. Of 1084, 148 samples revealed overt morphological involvement by B-NHL and were excluded from analysis. BM samples of 172/936 patients were morphologically negative but revealed involvement using MFC independently. Corresponding trephine biopsy involvement was detected in only 79/172 (45.9%) patients. On MFC, 23/172 samples showed BM involvement with &gt;10% lymphoma cells, and 149/172 (86.6%) samples revealed minimal involvement. In 54/149 (36.24%) samples, lymphoma cells were detected only with aberrant loss of CD305 expression. In 78 of the remaining 95 samples (82.1%), it provided an immunophenotypic aberrancy addition to other markers and supported the results. CD305 is a highly useful marker in the flow cytometric assessment of minimal BM involvement by B-NHL. MFC is a superior modality to trephine biopsy in detecting low-level BM involvement.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2024-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cyto.b.22193","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141509948","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enhancing lymphoma diagnosis on core needle biopsies: Integrating immunohistochemistry with flow cytometry. 加强核心针活检的淋巴瘤诊断:免疫组化与流式细胞术的结合。
IF 3.4 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-06-14 DOI: 10.1002/cyto.b.22185
Silvia Bellesi, Gabriele Schiaffini, Andrea Contegiacomo, Elena Maiolo, Camilla Iacovelli, Rosalia Malafronte, Simone D'Innocenzo, Eleonora Alma, Flaminia Bellisario, Marcello Viscovo, Fabrizia Campana, Alessandra De Filippis, Francesco D'Alò, Luigi Maria Larocca, Valerio De Stefano, Roberto Iezzi, Stefan Hohaus
{"title":"Enhancing lymphoma diagnosis on core needle biopsies: Integrating immunohistochemistry with flow cytometry.","authors":"Silvia Bellesi, Gabriele Schiaffini, Andrea Contegiacomo, Elena Maiolo, Camilla Iacovelli, Rosalia Malafronte, Simone D'Innocenzo, Eleonora Alma, Flaminia Bellisario, Marcello Viscovo, Fabrizia Campana, Alessandra De Filippis, Francesco D'Alò, Luigi Maria Larocca, Valerio De Stefano, Roberto Iezzi, Stefan Hohaus","doi":"10.1002/cyto.b.22185","DOIUrl":"https://doi.org/10.1002/cyto.b.22185","url":null,"abstract":"<p><p>Image-guided core needle biopsies (IG-CNB) represent a minimally invasive approach for obtaining tissue in patients with lymphadenopathy and suspected lymphoma. Despite their utility, diagnostic challenges persist, with lower efficacy compared with excisional biopsies. Our study aimed to evaluate the potential utility of incorporation of flow cytometry (FC) alongside immunohistochemistry (IHC) when performing IG-CNB for suspected lymphoproliferative diseases. Analyzing 170 consecutive cases, guided by ultrasound (n = 94) or computer tomography (n = 76), we employed a diagnostic algorithm, already established in our laboratory practice, utilizing three antibody cocktail-equipped tubes tailored for defining lymphomas, particularly those of B-cell origin. FC expedited the diagnostic process, yielding presumptive results in 87.6% of cases within 48 h, with a positive predictive value of 98%. Addition of FC to routine IHC enhanced the diagnostic rate from 91.2% to 95.3%, reducing IG-CNB failure rate by 45%, from 8.8% to 4.7%. This enhancement was particularly notable for deep-seated sites and in the setting of suspected disease recurrences. Consequently, FC emerges as a valuable adjunctive tool, allowing for the improvement of diagnostic performance, with a particular focus on the ability to quantify the expression of surface markers for targeted therapies, and holding the potential to diminish the necessity for repeat excisional biopsies subsequent to IG-CNB procedures.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141316910","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
cyTRBC1 evaluation rapidly identifies sCD3-negative peripheral T-cell lymphomas and reveals a novel type of sCD3-negative T-cell clone with uncertain significance. cyTRBC1 评估可快速识别 sCD3 阴性外周 T 细胞淋巴瘤,并揭示出一种新型 sCD3 阴性 T 细胞克隆,但其意义尚不确定。
IF 3.4 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-31 DOI: 10.1002/cyto.b.22182
Cong Lu, Mingyong Li, Jun Fu, Xiaoming Fan, Ling Zhong, Yanxin Li, Qian Xi
{"title":"cyTRBC1 evaluation rapidly identifies sCD3-negative peripheral T-cell lymphomas and reveals a novel type of sCD3-negative T-cell clone with uncertain significance.","authors":"Cong Lu, Mingyong Li, Jun Fu, Xiaoming Fan, Ling Zhong, Yanxin Li, Qian Xi","doi":"10.1002/cyto.b.22182","DOIUrl":"https://doi.org/10.1002/cyto.b.22182","url":null,"abstract":"<p><p>The flow cytometry-based evaluation of TRBC1 expression has been demonstrated as a rapid and specific method for detecting T-cell clones in sCD3-positive TCRαβ+ mature T-cell lymphoma. The aim of the study was to validate the utility of surface (s) TRBC1 and cytoplastic (cy) TRBC1 assessment in detecting clonality of sCD3-negative peripheral T-cell lymphomas (PTCLs), as well as exploring the existence and characteristics of sCD3-negative clonal T-cell populations with uncertain significance (T-CUS). Evaluation of sTRBC1 and cyTRBC1 were assessed on 61 samples from 37 patients with sCD3-negative PTCLs, including 26 angioimmunoblastic T-cell lymphoma (AITL) patients and 11 non-AITL patients. The sCD3-negative T-CUS were screened from 1602 patients without T-cell malignancy and 100 healthy individuals. Additionally, the clonality of cells was further detected through T-cell gene rearrangement analysis. We demonstrated the monotypic expression patterns of cyTRBC1 in all sCD3-negative PTCLs. Utilizing the cyTRBC1 evaluation assay, we identified a novel and rare subtype of sCD3-negative T-CUS for the first time among 13 out of 1602 (0.8%) patients without T-cell malignancy. The clonality of these cells was further confirmed through T-cell gene rearrangement analysis. This subset exhibited characteristics such as sCD3-cyCD3 + CD4 + CD45RO+, closely resembling AITL rather than non-AITL. Further analysis revealed that sCD3-negative T-CUS exhibited a smaller clone size in the lymph node and mass specimens compared to AITL patients. However, the clone size of sCD3-negative T-CUS was significantly lower than that of non-AITL patients in both specimen groups. In conclusion, we validated the diagnostic utility of cyTRBC1 in detecting sCD3-negative T-cell clonality, provided a comprehensive analysis of sCD3-negative T-CUS, and established a framework and provided valuable insights for distinguishing sCD3-negative T-CUS from sCD3-negative PTCLs based on their phenotypic properties and clone size.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141179145","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Issue highlights—May 2024 2024 年 5 月要闻
IF 3.4 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-30 DOI: 10.1002/cyto.b.22184
F. Mandy
{"title":"Issue highlights—May 2024","authors":"F. Mandy","doi":"10.1002/cyto.b.22184","DOIUrl":"10.1002/cyto.b.22184","url":null,"abstract":"<p>Just 50 years ago, in 1974, the first fluorescence-activated cell sorter (FACS) was ready for sale. Becton-Dickenson (BD) with a license from Stanford University introduced the FACS sorting platform, which was called the FACS-1. The Herzenberg group at Stanford patented this new flow cytometry (FC) platform 2 years earlier. To this day the popular acronym “FACS” is misused in that most BD FC are cell analyzers, yet they are all called FACS machines. Whether or not a flow cytometer can sort cells, they all detect receptors bound with fluorescent tags on leukocyte subsets. Herzenberg's brilliant idea to integrate four essential 20th-century discoveries related to cellular metrics into a single platform set the stage for a new phase of complex analytical platforms to support the fight against diseases. They include multi-laser excitation, hybridoma technology for tagging fluorescently tagged monoclonal antibodies, signal processing with fast microchips and multi-channel cell sorting.</p><p>Thanks to rapid access to information, when visiting Paul Robertson's virtual library of Cytometry History at Perdue University, it is possible to appreciate how rapidly flow cytometry has matured in over five decades. In minutes, one learns about the interactions between Mack Fulwyler, Len Herzenberg, Bob Auer, Ceasar Milstein, Howard Shapiro and many other fascinating pioneers of the bio-convergence revolution of the 20th-century. The cell sorting technology uses piezo-based oscillation to charge saline droplet-enveloped cells, which are transported to be analyzed and sorted to isolate leukocyte phenotypes of interest. The droplet formation for cell sorting was Fulwyler's adaptation of technology developed for inkjet printers. With fluorescence activation, cells of interest become visible and available to be sorted for functional verification if required. In the 19th century, philosopher Arthur Schopenhauer said, “Talent hits a target no one can hit; genius hits a target no one else can see.” For a half-century, thanks to Herzenberg's contribution, most of us with talent could see leukocyte subsets with statistical significance. Steady advancements in FC continue, and multi-labeled cells can be analyzed with confidence in clinical FC laboratories with tenacity and some talent. This nostalgic indulgence is now over, and the highlights of this issue are to follow.</p><p>Three original articles and two reports on best practices are covered. The first original article is about a novel optimization method to monitor B-cell maturation antigen-targeted chimeric antigen receptors in peripheral blood. The second is an update in the understanding of the role of CD20<sup>+</sup> T-cells. The third article is about the performance of a novel 8-color panel for measurable residual disease assessment in CLL. The first best practice report validates a T-cell receptor β-chain on the constant region (TRBC) immunophenotyping protocol. This new technology improves the diagnosis ","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cyto.b.22184","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141191953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthetic abnormal mast cell particles successfully mimic neoplastic mast cells by flow cytometry. 通过流式细胞术,合成异常肥大细胞颗粒成功模拟了肿瘤肥大细胞。
IF 3.4 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-30 DOI: 10.1002/cyto.b.22183
Patricia M Davis, Eugene Ravkov, Martina de Geus, Zach Clauss, John Lee, Anh Tuan Nguyen, Marsha Hartmann, Jeffrey Kim, Tracy I George, Leo Lin, David P Ng
{"title":"Synthetic abnormal mast cell particles successfully mimic neoplastic mast cells by flow cytometry.","authors":"Patricia M Davis, Eugene Ravkov, Martina de Geus, Zach Clauss, John Lee, Anh Tuan Nguyen, Marsha Hartmann, Jeffrey Kim, Tracy I George, Leo Lin, David P Ng","doi":"10.1002/cyto.b.22183","DOIUrl":"https://doi.org/10.1002/cyto.b.22183","url":null,"abstract":"<p><p>Clinical flow cytometry laboratories require quality control materials for assay development, validation, and performance monitoring, including new reagent lot qualification. However, finding suitable controls for populations with uncommonly expressed antigens or for rare populations, such as mast cells, can be difficult. To that end, we evaluated synthetic abnormal mast cell particles (SAMCP), developed together with, and manufactured by, Slingshot Biosciences. The SAMCP's were designed to phenotypically mimic abnormal neoplastic mast cells: they were customized to have the same light scatter and autofluorescence properties of mast cells, along with surface antigen levels of CD45, CD33, CD117, CD2, CD25, and CD30 consistent with that seen in mast cell disease. We evaluated several performance characteristics of these particles using ARUP's high sensitivity clinical mast cell assay, including limit of detection, off-target activity and FMO controls, precision, scatter properties of the particles utilizing several different cytometer platforms, and particle antigen stability. The phenotype of the SAMCP mimicked abnormal mast cells, and they could be distinguished from normal native mast cells. FMO controls demonstrated specificity of each of the markers, and no off-target binding was detected. The limit of detection of the particles spiked into normal bone marrow was found to be ≤0.003% in a limiting dilution assay. The mast cell particles were found to perform similarly on Becton Dickinson Lyric, Cytek Aurora, and Beckman Coulter Navios and CytoFLEX platforms. Within run and between run precision were less than 10% CV. SAMCP were stable up to 13 days with minimal loss of antigen fluorescence intensity. The SAMCP's were able to successfully mimic neoplastic mast cells based on the results of our high sensitivity mast cell flow cytometry panel. These synthetic cell particles represent an exciting and innovative technology, which can fulfill vital needs in clinical flow cytometry such as serving as standardized control materials for assay development and performance monitoring.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141179146","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
CD62-L down-regulation after L18-MDP stimulation as a complementary flow cytometry functional assay for the diagnosis of XIAP deficiency 将 L18-MDP 刺激后的 CD62-L 下调作为诊断 XIAP 缺乏症的辅助流式细胞术功能测定。
IF 2.3 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-21 DOI: 10.1002/cyto.b.22181
Agustín D. Rizzo, Marianela Sanz, Georgina Roffe, Elisa O. Sajaroff, Damian A. Prado, Emma Prieto, Verónica Goris, Jorge G. Rossi, Andrea R. Bernasconi
{"title":"CD62-L down-regulation after L18-MDP stimulation as a complementary flow cytometry functional assay for the diagnosis of XIAP deficiency","authors":"Agustín D. Rizzo,&nbsp;Marianela Sanz,&nbsp;Georgina Roffe,&nbsp;Elisa O. Sajaroff,&nbsp;Damian A. Prado,&nbsp;Emma Prieto,&nbsp;Verónica Goris,&nbsp;Jorge G. Rossi,&nbsp;Andrea R. Bernasconi","doi":"10.1002/cyto.b.22181","DOIUrl":"10.1002/cyto.b.22181","url":null,"abstract":"<p>X-linked inhibitor of apoptosis (XIAP) deficiency is an infrequent inborn error of immunity caused by mutations in XIAP gene. Most cases present with absence of XIAP protein which can be detected by flow cytometry (FC), representing a rapid diagnostic method. However, since some genetic defects may not preclude protein expression, it is important to include a complementary functional test in the laboratory workup of these patients. L-selectin (CD62-L) is a molecule that is cleaved from the surface membrane of leukocytes upon stimulation of different receptors such as toll like receptors (TLRs) and nucleotide-binding oligomerization domain-like receptors (NLRs), including NOD2. Considering that XIAP deficiency impairs NOD2 signaling, we decided to assess CD62-L down-regulation by FC post-stimulation of neutrophils and monocytes with L18-muramyl Di-Peptide (L18-MDP), a NOD2 specific agonist, in order to develop a novel assay for the functional evaluation of patients with suspicion of XIAP defects. Whole blood samples from 20 healthy controls (HC) and four patients with confirmed molecular diagnosis of XIAP deficiency were stimulated with 200 ng/mL of L18-MDP for 2 h. Stimulation with 100 ng/mL of lipopolysaccharide (LPS) was carried out in parallel as a positive control of CD62-L shedding. CD62-L expression was evaluated by FC using an anti CD62-L- antibody and down-regulation was assessed by calculating the difference in CD62-L expression before and after stimulation, both in terms of percentage of CD62-L expressing cells (Δ%CD62-L) and median fluorescence intensity (ΔMFI%). Neutrophils and monocytes from XIAP deficient patients displayed a significantly diminished response to L18-MDP stimulation compared with HC (<i>p</i> &lt; 0.0001), indicating a severely altered mechanism of CD62-L down-regulation following activation of NOD2-XIAP axis. On the other hand, the response to LPS stimulation was comparable between patients and heathy controls, suggesting preserved CD62-L shedding with a different stimulus. FC detection of CD62-L down-regulation in monocytes and neutrophils after whole blood stimulation with L18-MDP results in an effective and rapid functional test for the identification of XIAP deficient patients.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2024-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141070162","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Addition of CD14 improves discrimination of lymphocytes in the TBNK phenotyping panel 加入 CD14 可提高 TBNK 表型面板中淋巴细胞的鉴别能力。
IF 2.3 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-17 DOI: 10.1002/cyto.b.22180
Kimberly A. Shumate, Samantha N. Williams, Aashish B. Khatri, Vijaya Knight
{"title":"Addition of CD14 improves discrimination of lymphocytes in the TBNK phenotyping panel","authors":"Kimberly A. Shumate,&nbsp;Samantha N. Williams,&nbsp;Aashish B. Khatri,&nbsp;Vijaya Knight","doi":"10.1002/cyto.b.22180","DOIUrl":"10.1002/cyto.b.22180","url":null,"abstract":"<p>Peripheral blood lymphocyte phenotyping panels typically include CD45 for discrimination of the lymphocyte population, and fluorophore-conjugated monoclonal antibodies to identify T, B, and Natural Killer (NK) cells. While CD45 combined with side scatter is generally sufficient to clearly distinguish lymphocytes from monocytes in the majority of peripheral blood samples, it is challenging to accurately gate lymphocytes in samples from patients with monocytosis or significant lymphopenia, or from very young infants. Addition of a monocyte marker to lymphocyte phenotyping panels for monocyte exclusion has previously been evaluated for improved discrimination of lymphocytes, albeit largely in healthy donor adult samples. Here we evaluate the effect of the addition of CD14 to a standard lymphocyte phenotyping panel on total lymphocyte, T, B, and NK cell percentages in a predominantly pediatric population of patients under evaluation chiefly for immunodeficiency, immune-depletion, or immune reconstitution. Addition of CD14 to the standard lymphocyte phenotyping improved discrimination of lymphocytes from monocytes, resulted in decreased NK cell percentages, likely because CD16+ and/or CD56+ monocytes were included in the CD56+CD16+ NK cell gate with conventional gating, and although less significant, resulted in an increased percentage of B cells, since relatively larger B cells were likely gated out by more restrictive light scatter gating used with the conventional gating approach. The change in NK and B cell percentages were more pronounced in samples from patients below a year of age, and in patients who were relatively lymphopenic. These data suggest that addition of CD14 to conventional lymphocyte phenotyping panels that utilize CD45 versus side scatter gating results in significant improvement in the accuracy of lymphocyte gating, and accurate quantification of NK and B cells particularly in samples from infants and lymphopenic individuals.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2024-05-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140956581","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of three machine learning algorithms for classification of B-cell neoplasms using clinical flow cytometry data 利用临床流式细胞仪数据对三种机器学习算法进行 B 细胞肿瘤分类的比较。
IF 2.3 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-09 DOI: 10.1002/cyto.b.22177
Wikum Dinalankara, David P. Ng, Luigi Marchionni, Paul D. Simonson
{"title":"Comparison of three machine learning algorithms for classification of B-cell neoplasms using clinical flow cytometry data","authors":"Wikum Dinalankara,&nbsp;David P. Ng,&nbsp;Luigi Marchionni,&nbsp;Paul D. Simonson","doi":"10.1002/cyto.b.22177","DOIUrl":"10.1002/cyto.b.22177","url":null,"abstract":"<p>Multiparameter flow cytometry data is visually inspected by expert personnel as part of standard clinical disease diagnosis practice. This is a demanding and costly process, and recent research has demonstrated that it is possible to utilize artificial intelligence (AI) algorithms to assist in the interpretive process. Here we report our examination of three previously published machine learning methods for classification of flow cytometry data and apply these to a B-cell neoplasm dataset to obtain predicted disease subtypes. Each of the examined methods classifies samples according to specific disease categories using ungated flow cytometry data. We compare and contrast the three algorithms with respect to their architectures, and we report the multiclass classification accuracies and relative required computation times. Despite different architectures, two of the methods, flowCat and EnsembleCNN, had similarly good accuracies with relatively fast computational times. We note a speed advantage for EnsembleCNN, particularly in the case of addition of training data and retraining of the classifier.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2024-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140897264","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Flow cytometry for meningeal infiltration in B acute lymphoblastic leukemia in a low middle income country 流式细胞术检测中低收入国家 B 型急性淋巴细胞白血病的脑膜浸润。
IF 2.3 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-06 DOI: 10.1002/cyto.b.22179
Eya Anane, Fatma Ben Lakhal, Sarra Fekih Salem, Ons Ghali, Emna Feki, Yosr Ben Abdennebi, Marwa Bahri, Emna Azza, Lamia Aissaoui, Wijden El Borgi, Emna Gouider
{"title":"Flow cytometry for meningeal infiltration in B acute lymphoblastic leukemia in a low middle income country","authors":"Eya Anane,&nbsp;Fatma Ben Lakhal,&nbsp;Sarra Fekih Salem,&nbsp;Ons Ghali,&nbsp;Emna Feki,&nbsp;Yosr Ben Abdennebi,&nbsp;Marwa Bahri,&nbsp;Emna Azza,&nbsp;Lamia Aissaoui,&nbsp;Wijden El Borgi,&nbsp;Emna Gouider","doi":"10.1002/cyto.b.22179","DOIUrl":"10.1002/cyto.b.22179","url":null,"abstract":"<p>Meningeal infiltration in children with B acute lymphoblastic leukemia is one of the most serious complications. Timely diagnosis not only significantly enhances treatment efficacy but also leads to improve patient outcome and reduce risk of relapse. This is particularly crucial in low to middle income countries facing health constraints, where optimizing resources is essential. Conventional cytology (CC) study of cerebrospinal fluid (CSF) is considered in different countries to be the Gold-standard despite its low sensitivity (&lt; 50%). The study of CSF by multiparametric flow cytometry (MFC) appears to be an alternative. The aim of our study was to assess MFC analytical performance compared with CC. Our cross sectional study was conducted over a six-month period in the biological hematology department. CSF samples underwent analysis for the presence of blasts using both CC and MFC. Cytological slides of the CSF were prepared by cytocentrifugation in a Shandon Cytospin 4™. Flow cytometric analysis was performed on the BD FACSLyric™ flow cytometer. All statistical analyses were performed using SPSS version 21.0 (SPSS Inc.). Agreement between the two methods was made using the Kappa index and χ<sup>2</sup> test. This study was approved by the local ethics committee. Sixty CSF samples from 39 children with B acute lymphoblastic leukemia were analyzed. Meningeal infiltration was detected respectively in 20% of cases by MFC and 5% of cases by CC, with a significant difference <i>p</i> = 0.006. Comparing the two methods, the Kappa coefficient was 0.35, indicating weak agreement between the two methods. Moreover, MFC positivity was higher even for hypocellular samples. Of the 51 hypocellular samples, eight were positive by MFC while they were negative by CC. MFC shows better sensitivity while retaining good specificity for the detection of meningeal involvement. MFC could therefore be a complementary method to CC for detecting blast cells in the central nervous system.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2024-05-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140862490","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TRBC1 in flow cytometry: Assay development, validation, and reporting considerations 流式细胞仪中的 TRBC1:化验开发、验证和报告注意事项
IF 3.4 3区 医学
Cytometry Part B: Clinical Cytometry Pub Date : 2024-05-03 DOI: 10.1002/cyto.b.22175
Katherine A. Devitt, Wolfgang Kern, Weijie Li, Xuehai Wang, Allyson J. Wong, Felipe M. Furtado, Jean S. Oak, Andrea Illingworth
{"title":"TRBC1 in flow cytometry: Assay development, validation, and reporting considerations","authors":"Katherine A. Devitt,&nbsp;Wolfgang Kern,&nbsp;Weijie Li,&nbsp;Xuehai Wang,&nbsp;Allyson J. Wong,&nbsp;Felipe M. Furtado,&nbsp;Jean S. Oak,&nbsp;Andrea Illingworth","doi":"10.1002/cyto.b.22175","DOIUrl":"10.1002/cyto.b.22175","url":null,"abstract":"<p>The assessment of T-cell clonality by flow cytometry has long been suboptimal, relying on aberrant marker expression and/or intensity. The introduction of TRBC1 shows much promise for improving the diagnosis of T-cell neoplasms in the clinical flow laboratory. Most laboratories considering this marker already have existing panels designed for T-cell workups and will be determining how best to incorporate TRBC1. We present this comprehensive summary of TRBC1 and supplemental case examples to familiarize the flow cytometry community with its potential for routine application, provide examples of how to incorporate it into T-cell panels, and signal caution in interpreting the results in certain diagnostic scenarios where appropriate.</p>","PeriodicalId":10883,"journal":{"name":"Cytometry Part B: Clinical Cytometry","volume":null,"pages":null},"PeriodicalIF":3.4,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cyto.b.22175","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140841564","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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