Biochemistry and molecular biology international最新文献

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Inhibition of eukaryotic dna polymerase alpha by persimmon (Diospyros kaki) extract and related polyphenols. 柿子提取物及相关多酚对真核dna聚合酶α的抑制作用。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201883
H Umekawa, Y Takada, Y Furuichi, T Takahashi, Y Achiwa, T Komiya, S Yoshida
{"title":"Inhibition of eukaryotic dna polymerase alpha by persimmon (Diospyros kaki) extract and related polyphenols.","authors":"H Umekawa,&nbsp;Y Takada,&nbsp;Y Furuichi,&nbsp;T Takahashi,&nbsp;Y Achiwa,&nbsp;T Komiya,&nbsp;S Yoshida","doi":"10.1080/15216549900201883","DOIUrl":"https://doi.org/10.1080/15216549900201883","url":null,"abstract":"<p><p>The effects of persimmon extract (Diospyros kaki) and related polyphenols on eukaryotic DNA polymerase alpha were examined. It was found that persimmon extract, epigallocatechin gallate, and epicatechin gallate strongly inhibited the activity of DNA polymerase alpha purified from calf thymus. Among these polyphenols, persimmon extract had the most potent effect on DNA polymerase alpha activity and the concentration of persimmon extract producing 50% inhibition of the activity was 0.191 microM. Persimmon extract showed a weaker effect on DNA polymerase beta and slightly inhibited primase and DNA polymerase I. The inhibition of DNA polymerase alpha by persimmon extract was competitive with the template-primer and noncompetitive with dTTP substrate. The Ki value of DNA polymerase alpha for persimmon extract was estimated to be 70 nM. Moreover, persimmon extract inhibited [3H]thymidine incorporation of human peripheral lymphocyte cells stimulated by PHA.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"795-801"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201883","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234010","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Chemical modification studies on the glucose/mannose specific lectins from field and lablab beans. 大豆中葡萄糖/甘露糖特异性凝集素的化学改性研究。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201913
S K Nadimpalli
{"title":"Chemical modification studies on the glucose/mannose specific lectins from field and lablab beans.","authors":"S K Nadimpalli","doi":"10.1080/15216549900201913","DOIUrl":"https://doi.org/10.1080/15216549900201913","url":null,"abstract":"<p><p>Seeds of Dolichos lablab var. lignosus (field beans) and variety typicus (lablab beans) contain glucose/mannose specific lectins that have been affinity purified and well characterised (Siva Kumar N., and Rajagopal Rao, D., J.Biosci., 1986, 10, 95-109, (1) Rajasekhar et al., (Biochem.Archives. 1997, 13, 233-240) (2). Purified lectins are glycoproteins with a native molecular mass of 60 kDa and are made of two types of subunits (Gowda et al., 1994, J.Biol.Chem. 269, 18789-18793) (3). Chemical modifications of various groups in purified lectins (using group specific reagents) such as lysine (citraconic anhydride), carboxyl groups (water soluble carbodiimide) tyrosine (N-acetyl imidazole) and tryptophan (2-hydroxy 5-nitro benzylbromide) revealed that 14 out of 21 residues of lysines 7 out of 92 residues of carboxyl groups, 16 out of 24 tyrosine residues and 2 out of 10 tryptophan residues were modified. Lysine and carboxyl group modification led to 95% loss in haemaglutinating activity compared to control while tyrosine and tryptophan modifications led to complete loss of lectin activity. Arginine and histidine modifications led to only 50% loss in activity. The extent of modification and loss in activity was same when the lysine and carboxyl groups were modified in the presence and absence of the inhibitory sugar methyl alpha-D-glucopyranoside at 0.1 M concentration. However protection of modification and lectin activity was observed when the tyrosine and tryptophan residues were modified in the presence of the inhibitory sugar. Earlier CD studies carried out (1) and extensive chemical modification studies reported here substantiate the involvement of tyrosine and tryptophan residues in the sugar binding site of these lectins.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"825-34"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201913","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234013","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
Nucleoid proteins of pea chloroplasts: detection of a protein homologous to ribosomal protein. 豌豆叶绿体的核糖体蛋白:检测到一种与核糖体蛋白同源的蛋白。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201843
Oleskina YuP, N P Yurina, T I Odintsova, T A Egorov, A Otto, B Wittmann-Liebold, M S Odintsova
{"title":"Nucleoid proteins of pea chloroplasts: detection of a protein homologous to ribosomal protein.","authors":"Oleskina YuP, N P Yurina, T I Odintsova, T A Egorov, A Otto, B Wittmann-Liebold, M S Odintsova","doi":"10.1080/15216549900201843","DOIUrl":"10.1080/15216549900201843","url":null,"abstract":"<p><p>Basic proteins were isolated from purified pea chloroplast nucleoids by acid extraction. Using RP-HPLC, the component composition of the basic proteins was studied. SDS-PAGE of major HPLC-fractions showed that the basic nucleoid proteins are heterogeneous with mol. masses of components from 17 to 30 kDa. One polypeptide with mol. mass of 28 kDa (P28) was obtained by RP-HPLC. The sequencing of three tryptic peptides of P28 (T6, T17, and T19) showed that they are homologous to the ribosomal protein L19 of Saccharomyces cerevisiae. The possible functional role of ribosomal proteins in chloroplast nucleoids is discussed.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"757-63"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201843","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
C-terminal region of hTPO is important for secretion and expression in insect cells. hTPO的c端区对昆虫细胞的分泌和表达具有重要意义。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201803
H K Ahn, J Y Chung, S K Park, S M Joo, S K Park, Y W Koh
{"title":"C-terminal region of hTPO is important for secretion and expression in insect cells.","authors":"H K Ahn,&nbsp;J Y Chung,&nbsp;S K Park,&nbsp;S M Joo,&nbsp;S K Park,&nbsp;Y W Koh","doi":"10.1080/15216549900201803","DOIUrl":"https://doi.org/10.1080/15216549900201803","url":null,"abstract":"<p><p>Human thrombopoietin (hTPO) variant cDNAs truncated in the C-terminal regions of wild-type hTPO (332 amino acids) were constructed by PCR and expressed in Trichoplusia ni (Tn5) insect cells using a baculovirus expression system. Each variant, hTPO163 (amino acids 1-163), hTPO198 (1-198) and hTPO245 (1-245), was produced in insect cells with very low efficiency in comparison with wild-type hTPO. Immunoblot analysis showed that the predicted 20, 25 and 34 kDa molecular sizes corresponding to hTPO163, hTPO198 and hTPO245, respectively, were barely detected in culture medium and most of the proteins remained within the cell. These results suggest that C-terminal regions containing potential N-glycosylation sites of hTPO are required for the secretion of hTPO into culture medium as well as expression in insect cells.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"729-33"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201803","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234008","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Cloning, sequencing, expression and characterization of the manganese superoxide dismutase gene from Vibrio alginolyticus. 溶藻弧菌锰超氧化物歧化酶基因的克隆、测序、表达及特性分析。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201893
Y C Shyu, C C Chiu, F P Lin
{"title":"Cloning, sequencing, expression and characterization of the manganese superoxide dismutase gene from Vibrio alginolyticus.","authors":"Y C Shyu,&nbsp;C C Chiu,&nbsp;F P Lin","doi":"10.1080/15216549900201893","DOIUrl":"https://doi.org/10.1080/15216549900201893","url":null,"abstract":"<p><p>The sodA gene coding for manganese superoxide dismutase from the marine microorganism Vibrio alginolyticus was cloned, sequenced and over-expressed in Escherichia coli using the pET20b (+) expression vector. The full-length gene was consisted of 603bp open reading frame, which encoded a polypeptide of 201 amino acid residues, with a calculated molecular weight of 22672Da. The deduced amino acid sequence of the sodA showed considerable homology to other Mn-SODs. The recombinant enzyme was efficiently purified from crude E. coli cell lysate by the metal ion affinity chromatography. The recombinant VAMn-SOD resisted thermo-denaturation up to 60 degrees C and was insensitive to inhibitors such as H2O2, NaN3 and diethyldithiocarbamic acid.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"803-14"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201893","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234011","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Categorizing reactivity of bacteriorhodopsin cysteine mutants crosslinking to 4-bromoretinal. 细菌视紫红质半胱氨酸突变体与4-溴视网膜交联的反应性分类。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201863
N Datta-Gupta, R K Crouch, E S Hazard
{"title":"Categorizing reactivity of bacteriorhodopsin cysteine mutants crosslinking to 4-bromoretinal.","authors":"N Datta-Gupta,&nbsp;R K Crouch,&nbsp;E S Hazard","doi":"10.1080/15216549900201863","DOIUrl":"https://doi.org/10.1080/15216549900201863","url":null,"abstract":"<p><p>The structure of bacteriorhodopsin (bR) has been probed by a large number of experimental methods. In earlier work distance constraints measured from the 1BRD Brookhaven structure (1, 2) were used to guide site-directed mutagenesis/affinity labeling experiments (3-5). In the present study we report on the use of limited molecular dynamics (MD) investigations of the same bR/affinity label system. We show here that the chiral center introduced when 4-bromo-all-trans retinal is synthesized produces variable impact on potential crosslinking. Our MD analysis suggests the following ranking of binding site mutants in order of reactivity: R118C > S118C >> S121C > R141C >> S141C >>> R121C, R138C, S138C. Chirality appears to have limited effect for the M118C mutants but shows more dramatic impact for the T121C and S141C mutants. These results are in excellent agreement with the experimental observations and offer encouragement that MD can be a useful component of experimental design with considerable predictive power.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"773-80"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201863","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234134","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mitochondrial changes during the apoptotic process of HeLa cells exposed to cisplatin. 顺铂作用下HeLa细胞凋亡过程中线粒体的变化。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201853
J Melendez-Zajgla, E Cruz, V Maldonado, A M Espinoza
{"title":"Mitochondrial changes during the apoptotic process of HeLa cells exposed to cisplatin.","authors":"J Melendez-Zajgla,&nbsp;E Cruz,&nbsp;V Maldonado,&nbsp;A M Espinoza","doi":"10.1080/15216549900201853","DOIUrl":"https://doi.org/10.1080/15216549900201853","url":null,"abstract":"<p><p>HeLa cells undergo apoptosis after exposure to cisplatin. Since mitochondria have recently been proposed as a probable effector of this type of cell death, we performed an analysis using the fluorescent cation rhodamine 123, which is transported actively by this organelle. Cisplatin induces a decrease in the mitochondrial staining, as assessed by cytofluorometric analysis. Microscopic analysis demonstrated that this effect was accompanied by damage of the mitochondria. These features were not exclusive of cisplatin, as other antineoplasic agents (taxol, etoposide) elicited similar effects. These results point toward the notion of a general effect of antineoplasic drugs over the mitochondria during induction of apoptotic cell death.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"765-71"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201853","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234133","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 30
Phenotypic selection: a successful strategy to fix major genes of hypertension. 表型选择:固定高血压主要基因的成功策略。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201813
I Klöting, P Kovács, J van den Brandt
{"title":"Phenotypic selection: a successful strategy to fix major genes of hypertension.","authors":"I Klöting,&nbsp;P Kovács,&nbsp;J van den Brandt","doi":"10.1080/15216549900201813","DOIUrl":"https://doi.org/10.1080/15216549900201813","url":null,"abstract":"<p><p>Hypertension is dominantly inherited in cross hybrids between hypertensive SHR/Mol and normotensive BB/OK rats. We used these cross hybrids for repeated backcrossing of selected hypertensive animals onto normotensive BB/OK rats to fix high blood pressure and to generate a hypertensive and diabetic BB/OK rat subline. After 8 backcrosses, the backcross parents were genetically analysed with the aid of 259 microsatellite markers to identify SHR genes causing blood pressure of 177 +/- 10 mmHg in this BB/OK rat subline. Loci on chromosomes 1, 14 and 18 showed longest heterozygosity. These loci might contain major genes of the SHR rat causing hypertension in this BB/OK rat subline. This classical strategy seems to be most suitable to fix major genes of hypertension in particular and complex traits in general and therefore to generate new animal models.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"735-42"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201813","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Kinetic properties of ATP-dependent phosphofructokinase from grapefruit juice sacs: effect of TCA cycle intermediates. 葡萄柚汁囊中atp依赖性磷酸果糖激酶的动力学性质:TCA循环中间体的影响。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201833
E Van Praag, U Zehavi, R Goren
{"title":"Kinetic properties of ATP-dependent phosphofructokinase from grapefruit juice sacs: effect of TCA cycle intermediates.","authors":"E Van Praag,&nbsp;U Zehavi,&nbsp;R Goren","doi":"10.1080/15216549900201833","DOIUrl":"https://doi.org/10.1080/15216549900201833","url":null,"abstract":"<p><p>Grapefruit juice sac ATP-PFK was studied kinetically for its substrates ATP and Fru-6-P at pH = 7.5. The Km for ATP is equal to 39.8 +/- 4.6 microM. ATP becomes inhibitory at concentrations above 80 microM. The Km for ATP is not affected by the addition of citrate (10 mM). For Fru-6-P, the saturation curve is sigmoidal, with an S0.5 equal to 0.17 +/- 0.03 mM, in the presence of Mg++ (2.5 mM) and ATP (1 mM). ATP-PFK shows a negative cooperativity at lower concentrations of Fru-6-P (h = 0.5), while higher concentrations of the substrate induce a positive cooperation (h = 1.5). The presence of citrate affects the S0.5 affinity value, but not the Vmax. The presence of citrate (10 mM) removes the cooperative effect at higher concentrations of the substrate, as h = 1.0. A theoretical Ki for citrate was calculated and equals 1.30 mM.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"749-56"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201833","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234130","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Induction of apoptosis by selenite and selenodiglutathione in HL-60 cells: correlation with cytotoxicity. 亚硒酸盐和硒二谷胱甘肽诱导HL-60细胞凋亡:与细胞毒性的相关性。
Biochemistry and molecular biology international Pub Date : 1999-05-01 DOI: 10.1080/15216549900201873
D Y Cho, U Jung, A S Chung
{"title":"Induction of apoptosis by selenite and selenodiglutathione in HL-60 cells: correlation with cytotoxicity.","authors":"D Y Cho,&nbsp;U Jung,&nbsp;A S Chung","doi":"10.1080/15216549900201873","DOIUrl":"https://doi.org/10.1080/15216549900201873","url":null,"abstract":"<p><p>Effects of selenite and selenodiglutathione, an initial metabolite of selenite, on the induction of apoptosis and cytotoxicity were investigated in human promyelocytic leukemia HL-60 cells. Treatment of selenite or selenodiglutathione resulted in concentration-dependent cytotoxicity, measured by lactate dehydrogenase leakage assay, and by tetrazolium salt reduction assay. Selenodiglutathione has been shown to exert more cytotoxic effect than selenite in both assay systems. Time-course study of cellular selenium uptake suggests that the higher cytotoxicity of selenodiglutathione be largely due to faster and greater selenium uptake rate. Treatment with selenite or selenodiglutathione also induced apoptosis in a dose-dependent manner, as detected by enzyme-linked immunosorbent assay and by DNA fragmentation assay. The dose-response data of apoptosis induced by selenite or selenodiglutathione were similar to those of cytotoxicity, implicating a relationship between the induction of apoptosis and cytotoxicity. Zn, which is a well-known inhibitor of apoptosis, dose-dependently blocked not only the induction of apoptosis, but also the membrane damage induced by selenium, corroborating this hypothesis. It was noted that the inhibition of apoptosis by Zn exerted little protective effect on cytotoxicity at higher concentrations of selenium, compared with a perfect protective effect at low concentration of selenium. These results suggest that cytotoxicity induced by selenium may be partially correlated with apoptosis.</p>","PeriodicalId":8770,"journal":{"name":"Biochemistry and molecular biology international","volume":"47 5","pages":"781-93"},"PeriodicalIF":0.0,"publicationDate":"1999-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/15216549900201873","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"21234135","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 45
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