Rice Science最新文献

{"title":"LHD3 Encoding a J-Domain Protein Controls Heading Date in Rice","authors":"Liu Qiao ,&nbsp;Qiu Linlin ,&nbsp;Hua Yangguang ,&nbsp;Li Jing ,&nbsp;Pang Bo ,&nbsp;Zhai Yufeng ,&nbsp;Wang Dekai","doi":"10.1016/j.rsci.2023.03.015","DOIUrl":"10.1016/j.rsci.2023.03.015","url":null,"abstract":"<div><p>Heading date is one of the most important agronomic traits of rice, which critically affects rice ecogeographical adaptation, yield and quality. In this study, a <em>late heading date 3</em> (<em>lhd3</em>) mutant was screened from the ⁶⁰Co-γ irradiation mutant library. The <em>lhd3</em> delayed heading date in rice under both short day and long day conditions. Map-based cloning combined with Mutmap strategy was adopted to isolate the causal <em>LHD3</em> gene. The <em>LHD3</em> gene encodes a DNA_J domain protein, which was ubiquitously expressed in various plant organs, and dominant expressed in stems and leaves. Subcellular localization analysis showed that LHD3 was localized to nucleus, indicating that LHD3 may interact with other elements to regulate the expression of flowering genes. The transcriptions of the heading activators <em>Ehd1</em>, <em>Hd3a</em> and <em>RFT1</em> significantly decreased in the <em>lhd3</em> mutant, suggesting that <em>LHD3</em> may control the heading date through the <em>Ehd1-Hd3a</em>/<em>RFT1</em> photoperiodic flowering pathway. The variation and haplotype analyses of the genomic region of <em>LHD3</em> showed that there were 7 haplotypes in the <em>LHD3</em> region from 4 702 accessions. The haplotypes of <em>LHD3</em> can be divided into two classes: class a and class b, and the heading dates of these two classes were significantly different. Further study showed that two single nucleotide polymorphisms (SNPs), SNP10 (G2100C) in Hap II and SNP3 (C861T) in Hap VII, may be the functional sites causing early and late heading in accessions. Nucleotide diversity analysis showed <em>LHD3</em> had been selected in the <em>indica</em> population, rather than in the <em>japonica</em> population. Therefore, the present study sheds light on the regulation of <em>LHD3</em> on heading date in rice and suggests that <em>LHD3</em> is a novel promising new target for rice molecular design and breeding improvement.</p></div>","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 5","pages":"Pages 437-448"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44521393","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Rice Curled Its Leaves Either Adaxially or Abaxially to Combat Drought Stress","authors":"Ammara Latif ,&nbsp;Sun Ying ,&nbsp;Pu Cuixia ,&nbsp;Noman Ali","doi":"10.1016/j.rsci.2023.04.002","DOIUrl":"10.1016/j.rsci.2023.04.002","url":null,"abstract":"<div><p>Leaf rolling (LR) is one of the defensive mechanisms that plants have developed against adverse environmental conditions. LR is a typical drought response, promoting drought resistance in various gramineae species, including wheat, maize, and rice. Rice cultivation faces the formidable challenge of water deprivation because of its high water requirements, which leads to drought-related symptoms in rice. LR is an important morphological characteristic that plays a key role in controlling water loss during water insufficiency, thereby regulating leaf area and stature, which are crucial agronomic traits determining yield criteria. Bulliform, sclerenchyma, mesophyll, and vascular bundles are the cells that engage in LR and commonly exhibit adaxial or abaxial types of rolling in rice. The specific genes linked to rolling, either adaxially or abaxially, are discussed here. In addition to the factors influencing LR, here is a short review of the morphological, physiological and molecular responses of this adaptation under drought stress. Moreover, this review highlights how LR combats the consequences of drought stress. The eco-physiological and molecular mechanisms underlying this morphological adaptation in rice should be further explored, as they might be useful in dealing with various degrees of drought tolerance.</p></div>","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 5","pages":"Pages 405-416"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44975425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Priming for Saline-Alkaline Tolerance in Rice: Current Knowledge and Future Challenges","authors":"Jiang Changjie ,&nbsp;Liang Zhengwei ,&nbsp;Xie Xianzhi","doi":"10.1016/j.rsci.2023.05.003","DOIUrl":"10.1016/j.rsci.2023.05.003","url":null,"abstract":"<div><p>Soil salinization and/or alkalization is a major constraint to crop production worldwide. Approximately 60% of the cultivated land is affected by salt, over half of which is alkalized. Alkaline soils are characterized by high alkalinity and typically high salinity, which creates a complex saline-alkaline (SA) stress that affects plant growth. Rice cultivation has been accepted as an important strategy for effective utilization of SA land if water is available for irrigation. Nevertheless, as a salt-sensitive plant, rice plants suffer severe SA-induced damage, which results in poor plant growth and grain yield. Various approaches have been employed to improve rice productivity in SA land. Among them, the priming technique has emerged as a powerful method for enhancing SA tolerance in rice plants. In this review, we summarized how SA stress damages rice plants, and then presented how priming treatment can mitigate such damage.</p></div>","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 5","pages":"Pages 417-425"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47862829","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Transcriptome Analysis of oserf922 Mutants Reveals New Insights into Rice Blast Resistance","authors":"Qin Mengchao ,&nbsp;Tao Hui ,&nbsp;Shi Xuetao ,&nbsp;Zhang Chongyang ,&nbsp;He Feng ,&nbsp;Wang Min ,&nbsp;Liu Zheng ,&nbsp;Wang Jisong ,&nbsp;Zhang Rongxue ,&nbsp;Wang Shutong ,&nbsp;Wang Guoliang ,&nbsp;Ning Yuese ,&nbsp;Wang Ruyi","doi":"10.1016/j.rsci.2023.05.002","DOIUrl":"10.1016/j.rsci.2023.05.002","url":null,"abstract":"","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 5","pages":"Pages 374-378"},"PeriodicalIF":0.0,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45401279","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Seed Priming Improves Enzymatic and Biochemical Performances of Rice During Seed Germination under Low and High Temperatures","authors":"Salar Monajjem ,&nbsp;Elias Soltani ,&nbsp;Ebrahim Zainali ,&nbsp;Masoud Esfahani ,&nbsp;Farshid Ghaderi-Far ,&nbsp;Maryam Hosseini Chaleshtori ,&nbsp;Atefeh Rezaei","doi":"10.1016/j.rsci.2023.03.012","DOIUrl":"10.1016/j.rsci.2023.03.012","url":null,"abstract":"<div><p>As an abiotic stress, adverse germination temperatures cause serious disruptions in physiological and biochemical processes involved in seed germination. Using a factorial experiment, we examined the effects of different seed priming treatments on enzymatic and biochemical performances of rice seed germination under different temperatures. Each of the rice genotypes (Hashemi, Sadry-domsefid, IRON-70-7053-7 and NORIN-22) was primed with hydro-hardening, KCl, CaCl₂ and ascorbic acid (AsA) and without a priming agent as a control at low (15 ºC), optimum (25 ºC) and high (35 ºC) germination temperatures. The results showed that the enzymatic and biochemical performances of all the rice genotypes were affected by the seed priming agents, especially under the low germination temperature. At 15 ºC, seed priming with AsA was found to be the best agent for the activities of amylase, α-amylase, catalase (CAT), peroxidase (POX), ascorbate peroxidase (APOX) and superoxide dismutase (SOD) as well as the content of soluble sugars in the NORIN-22 genotype, and for protease activity and soluble protein content in the IRON-70-7053-7 genotype. SOD at the low germination temperature and CAT, POX and protease at the optimum and high germination temperatures were the most important enzymes in occurrence of germination potential in terms of seedling length, vigor index, normal seedling rate and germination rate. Under the priming agents, the highest changes in normal seedling rate were observed at the low and optimum germination temperatures by AsA priming in the Hashemi and NORIN-22 genotypes, and at the high germination temperature under KCl priming in the Hashemi genotype.</p></div>","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 4","pages":"Pages 335-347"},"PeriodicalIF":0.0,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42857184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Germplasm Resources, Genes and Perspective for Aromatic Rice","authors":"Prafulla Kumar Behera,&nbsp;Debabrata Panda","doi":"10.1016/j.rsci.2023.03.011","DOIUrl":"10.1016/j.rsci.2023.03.011","url":null,"abstract":"<div><p>Aromatic rice is considered an important commodity in the global market because of its strong aroma and eating and cooking quality. Asian countries, such as India and Pakistan, are the leading traders of Basmati rice, whereas Thailand is the major supplier of Jasmine rice in the international market. The strong aroma of rice is associated with more than 300 volatile compounds, among which 2-acetyl-1-pyrroline (2-AP) is the principal component. 2-AP is a phenotypic expression of spontaneous mutations in the recessive gene <em>OsBadh2</em> or <em>Badh2</em>. The present review focuses on the origin, evolution and diversity of genetic resources of aromatic rice available worldwide. A brief discussion is presented on the genes responsible for quality traits along with details of their molecular genetics. This compilation and discussion will be useful for future breeding programs and the biofortification of quality traits of aromatic rice to ensure food security and nutritional need.</p></div>","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 4","pages":"Pages 294-305"},"PeriodicalIF":0.0,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44163016","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Assessment of Climate Change Impact on Water Requirement and Rice Productivity","authors":"Konan Jean-Yves N’guessan ,&nbsp;Botou Adahi ,&nbsp;Arthur-Brice Konan-Waidhet ,&nbsp;Satoh Masayoshi ,&nbsp;Nogbou Emmanuel Assidjo","doi":"10.1016/j.rsci.2023.03.010","DOIUrl":"10.1016/j.rsci.2023.03.010","url":null,"abstract":"<div><p>Assessing the impact of climate change (CC) on agricultural production systems is mainly done using crop models associated with climate model outputs. This review is one of the few, with the main objective of providing a recent compendium of CC impact studies on irrigation needs and rice yields for a better understanding and use of climate and crop models. We discuss the strengths and weaknesses of climate impact studies on agricultural production systems, with a particular focus on uncertainty and sensitivity analyses of crop models. Although the new generation global climate models (GCMs) are more robust than previous ones, there is still a need to consider the effect of climate uncertainty on estimates when using them. Current GCMs cannot directly simulate the agro-climatic variables of interest for future irrigation assessment, hence the use of intelligent climate tools. Therefore, sensitivity and uncertainty analyses must be applied to crop models, especially for their calibration under different conditions. The impacts of CC on irrigation needs and rice yields vary across regions, seasons, varieties and crop models. Finally, integrated assessments, the use of remote sensing data, climate smart tools, CO₂ enrichment experiments, consideration of changing crop management practices and multi-scale crop modeling, seem to be the approaches to be pursued for future climate impact assessments for agricultural systems.</p></div>","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 4","pages":"Pages 276-293"},"PeriodicalIF":0.0,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44858968","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Diversity of Arbuscular Mycorrhizal Fungi Associated with Six Rice Cultivars in Italian Agricultural Ecosystem Managed with Alternate Wetting and Drying","authors":"V. Volpe, F. Magurno, P. Bonfante, S. Ghignone, E. Lumini","doi":"10.1016/j.rsci.2023.02.003","DOIUrl":"https://doi.org/10.1016/j.rsci.2023.02.003","url":null,"abstract":"","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"1 1","pages":""},"PeriodicalIF":4.8,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"55304374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Morphophysiological Diversity and Haplotype Analysis of Saltol QTL Region in Diverse Rice Landraces for Salinity Tolerance","authors":"B.M. Lokeshkumar ,&nbsp;S.L. Krishnamurthy ,&nbsp;Suman Rathor ,&nbsp;Arvinder Singh Warriach ,&nbsp;N.M. Vinaykumar ,&nbsp;B.M. Dushyanthakumar ,&nbsp;Parbodh Chander Sharma","doi":"10.1016/j.rsci.2023.02.001","DOIUrl":"10.1016/j.rsci.2023.02.001","url":null,"abstract":"<div><p>Rice is sensitive to salinity stress at both the seedling and reproductive stages. The present study used 145 rice genotypes comprising of 100 landraces and 45 advanced breeding lines collected from different regions of India. These genotypes were evaluated in hydroponics under control [electrical conductivity (EC_e) ∼1.2 dS/m] and saline (EC_e ∼10.0 dS/m) environments along with susceptible (IR29) and tolerant (FL478) checks. The stress susceptibility index for eight morphophysiological traits was estimated. Analysis of variance showed significant differences among the genotypes for all the parameters studied in control, stress and relative stress conditions. We identified 3 landraces (Kuttimanja, Tulasimog and IET-13713I) as tolerant and 14 lines as moderately tolerant to salt stress. Strong correlations in the morphological (root and shoot lengths) and physiological traits (shoot Na⁺, Ca²⁺ and Mg²⁺ contents, and Na⁺/K⁺ ratio) were observed under all the conditions. The hierarchical cluster analysis grouped the genotypes into five clusters, among which cluster II comprised salt-tolerant lines. Haplotyping of <em>Saltol</em> region using 11 simple sequence repeat markers on 17 saline tolerant and moderately tolerant lines was conducted. Markers AP3206F, RM10793 and RM3412b, located close to <em>SKC1</em> gene (11.23‒12.55 Mb), displayed diverse allelic variations and they were not related to the FL478 type. In this region, tolerant lines like Kuttimanja, IET-13713I and Tulasimog have new alleles. As a result, these lines may be suitable candidates for novel genomic regions governing rice salinity tolerance. Salt-tolerance ability of Kuttimanja, Tulasimog and IET-13713I was validated in two years in three salinity stress environments. These promising lines can be used in breeding programs to broaden the genetic base of salinity tolerance in rice, and it may help to dissect key genomic regions responsible for salinity tolerance.</p></div>","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 4","pages":"Pages 306-320"},"PeriodicalIF":0.0,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47610878","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Screening Rice Germplasm with Different Genetic Backgrounds for Cadmium Accumulation in Brown Rice in Cadmium-Polluted Soils","authors":"Zhang Weixing ,&nbsp;Guan Meiyan ,&nbsp;Wang Jie ,&nbsp;Wang Yulei ,&nbsp;Zhang Weigui ,&nbsp;Lu Xinzhe ,&nbsp;Xu Ping ,&nbsp;Chen Mingxue ,&nbsp;Zhu Youwei","doi":"10.1016/j.rsci.2023.01.009","DOIUrl":"10.1016/j.rsci.2023.01.009","url":null,"abstract":"","PeriodicalId":56069,"journal":{"name":"Rice Science","volume":"30 4","pages":"Pages 267-270"},"PeriodicalIF":0.0,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46914573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}