Journal of Zoological Systematics and Evolutionary Research最新文献

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Dissecting a Geographical Colourful Tapestry: Phylogeography of the Colour Polymorphic Spider Gasteracantha cancriformis 解剖地理彩色挂毯:颜色多态蜘蛛的系统地理学
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2022-04-04 DOI: 10.1155/2022/8112945
Fabian C. Salgado-Roa, Lisa Chamberland, Carolina Pardo-Díaz, D. Cisneros-Heredia, E. Lasso, C. Salazar
{"title":"Dissecting a Geographical Colourful Tapestry: Phylogeography of the Colour Polymorphic Spider Gasteracantha cancriformis","authors":"Fabian C. Salgado-Roa, Lisa Chamberland, Carolina Pardo-Díaz, D. Cisneros-Heredia, E. Lasso, C. Salazar","doi":"10.1155/2022/8112945","DOIUrl":"https://doi.org/10.1155/2022/8112945","url":null,"abstract":"Species with large distributions provide unique opportunities to test how geography has influenced biotic diversification. In this work, we aimed to explore the effect of geographic barriers on the distribution of the phenotypic and genetic variation of a spider species that is widespread in continental and insular America. We obtained an alignment of the mitochondrial locus Cytochrome Oxidase I (COI) for 408 individuals across the geographic range of Gasteracantha cancriformis. We used phylogenetics, population genetics, and morphology to explore the genetic and phenotypic variation of this species. We found five genetically differentiated and geographically structured populations. Three of them are distributed in continental America, separated by the Andes mountains, and two are in the Caribbean and Galapagos Islands. Some of these geographic clades shared haplotypes between them, which may be a consequence of dispersal. We detected at least 20 phenotypes of G. cancriformis, some of which were exclusive to a geographic region, while others occurred in multiple regions. We did not observe well-defined morphological differences across male genitalia. This evidence suggests that G. cancriformis is a widespread species with high phenotypic variation that should be explored in more depth.","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2022-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49215415","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Landscape Genetics and Species Delimitation in the Andean Palm Rocket Frog (Aromobatidae, Rheobates) 安第斯棕榈火箭蛙(香蛙科,红蛙科)的景观遗传学和物种划分
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2022-02-09 DOI: 10.1155/2022/6774225
Gabrielle Genty, Carlos E. Guarnizo, Juan P. Ramírez, L. Barrientos, A. Crawford
{"title":"Landscape Genetics and Species Delimitation in the Andean Palm Rocket Frog (Aromobatidae, Rheobates)","authors":"Gabrielle Genty, Carlos E. Guarnizo, Juan P. Ramírez, L. Barrientos, A. Crawford","doi":"10.1155/2022/6774225","DOIUrl":"https://doi.org/10.1155/2022/6774225","url":null,"abstract":"The complex topography of the species-rich northern Andes creates heterogeneous environmental landscapes that are hypothesized to have promoted population fragmentation and diversification by processes such as vicariance or local adaptation. Previous phylogenetic work on the palm rocket frog (Anura: Aromobatidae: Rheobates spp.), endemic to midelevation forests of Colombia, suggested that valleys were important in promoting divergence between lineages. In this study, we first evaluated previous hypotheses of species-level diversity, then fitted an isolation-with-migration (IM) historical demographic model, and tested two landscape genetic models to explain genetic divergence within Rheobates: isolation by distance and isolation by environment. The data consisted of two mitochondrial and four nuclear genes from 24 samples covering most of the geographic range of the genus. Species delimitation by Bayesian Phylogenetics and Phylogeography recovered five highly divergent genetic lineages within Rheobates, among which few to no migrants are exchanged according to IM. We found that isolation by environment provided the only variable significantly correlated with genetic distances for both mitochondrial and nuclear genes, suggesting that local adaptation may have a role in driving the genetic divergence within this frog genus. Thus, genetic divergence in Rheobates may be driven more by variation among the local environments where these frogs live rather than by geographic distance.","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2022-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45230656","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phylogeographic pattern, genetic diversity, and evolutionary history of the enigmatic freshwater fish species Aulopyge huegelii (Actinopterygii: Cyprinidae) 神秘淡水鱼类Aulopyge huegelii的系统发育模式、遗传多样性和进化史
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-12-08 DOI: 10.1111/jzs.12574
Ivana Buj, Mia Knjaz, Marko Ćaleta, Zoran Marčić, Lucija Ivić, Lucija Onorato, Radek Šanda, Jasna Vukić, Sven Horvatić, Davor Zanella, Perica Mustafić
{"title":"Phylogeographic pattern, genetic diversity, and evolutionary history of the enigmatic freshwater fish species Aulopyge huegelii (Actinopterygii: Cyprinidae)","authors":"Ivana Buj,&nbsp;Mia Knjaz,&nbsp;Marko Ćaleta,&nbsp;Zoran Marčić,&nbsp;Lucija Ivić,&nbsp;Lucija Onorato,&nbsp;Radek Šanda,&nbsp;Jasna Vukić,&nbsp;Sven Horvatić,&nbsp;Davor Zanella,&nbsp;Perica Mustafić","doi":"10.1111/jzs.12574","DOIUrl":"10.1111/jzs.12574","url":null,"abstract":"<p>The genus <i>Aulopyge</i>, represented by a single species, the Dalmatian barbelgudgeon, <i>Aulopyge huegelii</i>, is an endemic genus with very restricted distribution range comprising several rivers in southern Croatia and Bosnia and Herzegovina. In this study, molecular genetic analyses based on three molecular markers (one nuclear and two mitochondrial) were performed to confirm the position of <i>Aulopyge</i> within Cyprinidae, obtain data on its evolutionary history, and describe its population genetic structure and diversity. Specimens of <i>A</i>. <i>huegelii</i> were obtained throughout the distribution range. Phylogenetic reconstruction corroborated the independent position of this species and its placement within the Barbinae subfamily. The evolutionary history of <i>A</i>. <i>huegelii</i> started already in the middle Oligocene, whereas intraspecific divergences that left a trace in its current genetic structure and diversity are of much younger origin, starting in the middle Pleistocene. Unlike in other cypriniform species and genera distributed in the Dinaric karst region, there is no significant structuring within <i>A</i>. <i>huegelii</i>, or distribution of haplotypes concordant with the geographic scale. Furthermore, low effective population sizes estimated for most populations and low genetic diversities within them raise strong concerns about the viability and future survival of this endemic species.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47288727","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
A molecular and chromosomic meta-analysis approach and its implications for the taxonomy of the genus Makalata Husson, 1978 (Rodentia, Echimyidae) including an amended diagnosis for M. macrura (Wagner, 1842) 分子和染色体meta分析方法及其对Makalata Husson, 1978(啮齿目,刺螨科)属分类的意义,包括对M. macrura的修正诊断(Wagner, 1842)
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-12-08 DOI: 10.1111/jzs.12573
Cleuton Lima Miranda, Mario da Silva Nunes, Izeni Pires Farias, Maria Nazareth F. da Silva, Rogério Vieira Rossi, Eduardo Eler, Eliana Feldberg, Raimundo Darley Figueiredo da Silva, Tadeu Gomes de Oliveira, Cleusa Yoshiko Nagamachi, Julio Cesar Pieczarka
{"title":"A molecular and chromosomic meta-analysis approach and its implications for the taxonomy of the genus Makalata Husson, 1978 (Rodentia, Echimyidae) including an amended diagnosis for M. macrura (Wagner, 1842)","authors":"Cleuton Lima Miranda,&nbsp;Mario da Silva Nunes,&nbsp;Izeni Pires Farias,&nbsp;Maria Nazareth F. da Silva,&nbsp;Rogério Vieira Rossi,&nbsp;Eduardo Eler,&nbsp;Eliana Feldberg,&nbsp;Raimundo Darley Figueiredo da Silva,&nbsp;Tadeu Gomes de Oliveira,&nbsp;Cleusa Yoshiko Nagamachi,&nbsp;Julio Cesar Pieczarka","doi":"10.1111/jzs.12573","DOIUrl":"10.1111/jzs.12573","url":null,"abstract":"<p>Morphology has been used to establish interspecific limits in echimyid rodents. However, using only morphology can be problematic, especially for polymorphic or morphologically cryptic species. Recently, combined data sources have been used to recognize and delimit species and have proven to be especially useful for taxonomic resolutions. <i>Makalata</i> is a taxonomically problematic genus that needs revision. Currently, two species are recognized: <i>M</i>. <i>didelphoides</i> and <i>M</i>. <i>macrura</i>. A third species, <i>M</i>. <i>obscura</i>, is considered questionable. Molecular studies demonstrate that diversity in the genus has been underestimated. In the present study, we identified 14 subclades representing potential species in the genus <i>Makalata</i> using molecular and cytogenetic data. Analysis of species delimitation corroborated this hypothesis. Four lineages in the Guiana Shield, currently considered to be a single taxonomic entity in the literature (<i>M</i>. <i>didelphoides</i>) based only on morphology, were shown to be potential cryptic species, differentiated only by molecular and karyotype data. We verified that the name <i>M</i>. <i>didelphoides</i> cannot be applied to any clade or museum specimen without a genetic approach and sequencing of the holotype. We present an amended diagnosis for <i>M</i>. <i>macrura</i> through examination of the original description, sequencing, and karyotype of topotypic samples allowed us to associate with the name <i>M</i>. <i>macrura</i> represented by subclade I in this study. Karyotype data proved to be a powerful tool in differentiating the <i>Makalata</i> species according to different combinations of diploid number (2<i>n</i>) and fundamental number, as for other genera of spiny tree-rats. Our results demonstrate a heterogeneous status for <i>Makalata</i>, highlighting the importance of using multiple tools to determine the taxonomy of this group and reinforcing the importance of molecular and chromosomal data added to the morphological data to obtain a more accurate picture of the taxonomic diversity of this and other small mammal genera.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44426773","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A taxonomically complex catfish group from an underrepresented geographic area: Systematics and species limits in Hypostomus Lacépède, 1803 (Siluriformes, Loricariidae) from Eastern South America 来自一个代表性不足的地理区域的一个分类复杂的鲶鱼群:南美洲东部Lacépède下口目的系统学和物种限制
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-12-06 DOI: 10.1111/jzs.12572
Marcia da Silva Anjos, Luiz Jardim de Queiroz, Iago de Souza Penido, Jamille de Araújo Bitencourt, Silvia Britto Barreto, Luisa Maria Sarmento-Soares, Henrique Batalha-Filho, Paulo Roberto Antunes de Mello Affonso
{"title":"A taxonomically complex catfish group from an underrepresented geographic area: Systematics and species limits in Hypostomus Lacépède, 1803 (Siluriformes, Loricariidae) from Eastern South America","authors":"Marcia da Silva Anjos,&nbsp;Luiz Jardim de Queiroz,&nbsp;Iago de Souza Penido,&nbsp;Jamille de Araújo Bitencourt,&nbsp;Silvia Britto Barreto,&nbsp;Luisa Maria Sarmento-Soares,&nbsp;Henrique Batalha-Filho,&nbsp;Paulo Roberto Antunes de Mello Affonso","doi":"10.1111/jzs.12572","DOIUrl":"10.1111/jzs.12572","url":null,"abstract":"<p><i>Hypostomus</i> Lacépède, 1803, is a species-rich and widespread fish genus from the Neotropical region, but its evolutionary history and systematics remain largely unclear. In addition, species from regions with high levels of species richness and endemism such as the Northeastern Mata Atlântica (NMA) and São Francisco (SF) hydrographic freshwater ecoregions are underrepresented in phylogenetic studies so far. In this study, we performed a broad sampling of <i>Hypostomus</i> in NMA and SF to investigate the interspecific boundaries and phylogenetic relationships using a multilocus approach based on one mitochondrial and three nuclear markers. Seven genetic groups were found for both ecoregions, in addition to one lineage exclusive to the SF represented by populations of the species <i>Hypostomus</i> <i>velhochico</i>. Moreover, multilocus analyses validated 16 formally described species and two new lineages for the NMA and SF ecoregions, as well as putative cases of species complexes. In general, lineages with independent evolutionary histories were revealed within the same ecoregion alongside genetically related groups between NMA, SF, and other ecoregions. These data reinforce the intricate scenario of this group of Neotropical fish and are useful to outline further phylogeographic studies in <i>Hypostomus</i>.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49397531","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Species delimitation and phylogeny of Doto (Nudibranchia: Dotidae) from the Northeast Atlantic, with a discussion on food specialization 东北大西洋Doto的物种划分和系统发育(裸鳃目:Doto科)——兼论食物的特殊性
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-12-02 DOI: 10.1111/jzs.12561
Svante Martinsson, Klas Malmberg, Torkild Bakken, Tatiana Korshunova, Alexander Martynov, Kennet Lundin
{"title":"Species delimitation and phylogeny of Doto (Nudibranchia: Dotidae) from the Northeast Atlantic, with a discussion on food specialization","authors":"Svante Martinsson,&nbsp;Klas Malmberg,&nbsp;Torkild Bakken,&nbsp;Tatiana Korshunova,&nbsp;Alexander Martynov,&nbsp;Kennet Lundin","doi":"10.1111/jzs.12561","DOIUrl":"10.1111/jzs.12561","url":null,"abstract":"<p>The nudibranch genus <i>Doto</i> is taxonomically problematic in particular, and some species are described on the notion of strict monophagy. Here we perform species delimitation on NE Atlantic species, as well as placing them phylogenetically, using two markers: the mitochondrial <i>COI</i> and the nuclear <i>H3</i>. We also study the morphology of the species including radular ultrastructure and review food specificity. Specimens were first divided into potential species using ABDG on both markers, these groups were used as input species for species delimitation analyses using BPP, and analyses were performed with both markers combined and on H3 only. The analyses delimit 11 and eight species, respectively. With the exception of one species for which only <i>COI</i> was available, the differences are found in <i>D</i><i>. fragilis</i>, which is split into three groups when <i>COI</i> is included and lumped into one with only H3. <i>Doto hystrix</i> is nested within these groups. We also found that specimens from Sweden seemingly close to <i>D. maculata</i> in external morphology have identical sequences as <i>D. coronata</i>. Analysis of food preferences of the species involved in the study contradicts the notion of strict monophagy within <i>Doto</i>.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/jzs.12561","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44554175","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Parallel evolution of a new sympatric species pair of Crenicichla (Teleostei: Cichlidae) from Misiones, Argentina with a review of biogeography and mitonuclear discordance in the C. mandelburgeri species complex 阿根廷米西奥内斯一对新的同域物种Crenicichla(Teleostei:慈鲷科)的平行进化——对曼德尔伯格C.mandelburgeri物种复合体中生物地理学和核分裂不一致性的回顾
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-12-01 DOI: 10.1111/jzs.12566
Oldřich Říčan, Štěpánka Říčanová, Adriana Almirón, Jorge Casciotta, Lubomír Piálek
{"title":"Parallel evolution of a new sympatric species pair of Crenicichla (Teleostei: Cichlidae) from Misiones, Argentina with a review of biogeography and mitonuclear discordance in the C. mandelburgeri species complex","authors":"Oldřich Říčan,&nbsp;Štěpánka Říčanová,&nbsp;Adriana Almirón,&nbsp;Jorge Casciotta,&nbsp;Lubomír Piálek","doi":"10.1111/jzs.12566","DOIUrl":"10.1111/jzs.12566","url":null,"abstract":"<p>The <i>Crenicichla mandelburgeri</i> species complex from the Middle Paraná shows parallel evolution of ecomorphs to the unrelated <i>Crenicichla missioneira</i> species complex from the Uruguay River. In this article, we describe a new species pair (<i>C</i>. sp. Piray Guazú and <i>C</i>. sp. Piray Guazú Line) from the <i>C</i>. <i>mandelburgeri</i> species complex that has evolved a parallel morphological and ecological dichotomy to another species pair from the same species complex (<i>Crenicichla ypo</i>, <i>Crenicichla yjhui</i>) and also to species in the unrelated <i>C</i>. <i>missioneira</i> species complex (<i>C</i>. <i>missioneira</i>, <i>Crenicichla celidochilus</i>). The new species pair is endemic to a single tributary (the Piray Guazú) of the Middle Paraná River where it is sympatric and partly syntopic. Mitochondrial DNA phylogeny shows the two new species as distantly related within the <i>C</i>. <i>mandelburgeri</i> species complex, each with a sister species in the Iguazú rather than in the neighbouring Paraná river tributaries. Reduced genome representation ddRAD analyses of the nuclear genome demonstrate their close relationship, which is however complicated by the hybrid origin of one of the new species (<i>C</i>. sp. Piray Guazú Line). The hybrid origin of this species is demonstrated by sharing the ancestral genetic stock with its sympatric sister species (<i>C</i>. sp. Piray Guazú) while having an admixture from the widespread species <i>C</i>. <i>mandelburgeri</i> from the main Middle Paraná channel. In this study we also review the role of biogeography and mitonuclear discordance during evolution of the whole <i>C</i>. <i>mandelburgeri</i> species complex.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44324205","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Diversification and secondary contact in the magpie-jays (Calocitta) throughout the pacific lowlands of Mesoamerica 中美洲太平洋低地喜鹊(Calocitta)的多样化和二次接触
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-12-01 DOI: 10.1111/jzs.12571
Luis A. Sánchez-González, Vicente J. Castillo-Chora, Enrique Arbeláez-Cortés, Adolfo G. Navarro-Sigüenza
{"title":"Diversification and secondary contact in the magpie-jays (Calocitta) throughout the pacific lowlands of Mesoamerica","authors":"Luis A. Sánchez-González,&nbsp;Vicente J. Castillo-Chora,&nbsp;Enrique Arbeláez-Cortés,&nbsp;Adolfo G. Navarro-Sigüenza","doi":"10.1111/jzs.12571","DOIUrl":"10.1111/jzs.12571","url":null,"abstract":"<p>The Mesoamerican dry forests (MDF), rich in species and in endemic taxa, are distributed nearly continuously nearly continuously along the American Pacific slope from Mexico to Costa Rica; however, several of the bird species inhabiting the MDF show clear phenotypic differentiation recognized through the description of subspecies. There are two currently recognized species of magpie-jays of the genus <i>Calocitta</i> (Corvidae) distributed throughout the MDF: the monotypic black-throated magpie-jay (<i>C. colliei</i>) and the polytypic white-throated magpie-jay (<i>C. formosa</i>). These two species have sometimes been considered conspecific and have been reported to hybridize in sympatric areas, where birds with intermediate plumage characters are recorded. Using mitochondrial and nuclear DNA markers from individuals of the two species, we analyze the phylogeographic structure and the genetic diversity within <i>Calocitta</i> under an isolation with migration (IM) model. The results showed strong genetic structure, in which the two currently recognized species and some of the <i>C. formosa</i> subspecies grouped into four well-supported and reciprocally monophyletic clades. IM analyses suggested divergence dates for the split between <i>C. colliei</i> and <i>C. formosa</i> that were congruent with geological factors, as well as with the deep divergence of the three lineages within <i>C. formosa</i>. These factors likely led to a dynamic demographic history in all lineages. We also found strongly limited gene flow, null or near null migration values, and large genetic fixation and genetic distance values. We suggest that the strong genetic differentiation between lineages is the result of allopatric differentiation with later secondary contact, further supporting a highly dynamic biotic history in MDF.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43319737","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Diversity, distribution, and evolutionary history of the most studied African rodents, multimammate mice of the genus Mastomys: An overview after a quarter of century of using DNA sequencing 非洲啮齿类动物的多样性、分布和进化历史,研究最多的Mastomys属的多配偶小鼠:使用DNA测序的四分之一世纪后的概述
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-12-01 DOI: 10.1111/jzs.12569
Alexandra Hánová, Adam Konečný, Ondřej Mikula, Anna Bryjová, Radim Šumbera, Josef Bryja
{"title":"Diversity, distribution, and evolutionary history of the most studied African rodents, multimammate mice of the genus Mastomys: An overview after a quarter of century of using DNA sequencing","authors":"Alexandra Hánová,&nbsp;Adam Konečný,&nbsp;Ondřej Mikula,&nbsp;Anna Bryjová,&nbsp;Radim Šumbera,&nbsp;Josef Bryja","doi":"10.1111/jzs.12569","DOIUrl":"10.1111/jzs.12569","url":null,"abstract":"<p>Despite the importance of rodents as agricultural pests and reservoirs of zoonoses, the taxonomy and evolutionary history of many groups is still not sufficiently understood. The genus <i>Mastomys</i> (multimammate mice or rats) comprises abundant and intensively studied rodents, widespread across sub-Saharan Africa. Here, we used an extensive dataset of mitochondrial DNA markers comprising of nearly 2700 individual sequences from 30 African countries to update the information about the geographical distribution of their genetic diversity. In the next step, we sequenced complete mitogenomes, six nuclear markers, and produced anchored phylogenomic data (355 loci) and, for the first time, sufficiently resolved phylogenetic relationships among all extant <i>Mastomys</i> species and reconstructed their evolutionary history. The results suggest eight species of <i>Mastomys</i> occupying various non-forested environments. Some species are very widespread (<i>Mastomys natalensis</i>, <i>Mastomys kollmannspergeri</i>, and <i>Mastomys erythroleucus</i>; for the latter we provide first records from Tanzania, thus significantly extending its distribution), while others have their distribution restricted to particular geographical areas (<i>Mastomys coucha</i> in South African region, <i>Mastomys awashensis</i> in Ethiopia, and <i>Mastomys angolensis</i> in Angola and southern DRC) or to particular habitat, that is, wetlands in western (<i>Mastomys huberti</i>) or southwestern (<i>Mastomys shortridgei</i>) Africa. The first split separating <i>M</i>. <i>angolensis</i> (with five pairs of mammae only) from remaining multimammate taxa occurred in mid-Pliocene, but the most intensive radiation occurred in mid-Pleistocene and was likely driven by the intensification of climate oscillations. The resolved phylogeny of <i>Mastomys</i> will facilitate their further use as model taxa, for example, in understanding proximate mechanisms of evolution of the multimammate phenotype.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48202017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Weak population-genetic structure of a widely distributed nematode parasite of frogs in the western Palearctic 北极西部一种广泛分布的蛙类线虫的弱群体遗传结构
IF 1.9 2区 生物学
Journal of Zoological Systematics and Evolutionary Research Pub Date : 2021-11-30 DOI: 10.1111/jzs.12575
Peter Mikulíček, Michaela Mešková, Martin Cyprich, Daniel Jablonski, Petr Papežík, Diyar Hamidi, Çiğdem Akın Pekşen, Judit Vörös, David Herczeg, Michal Benovics
{"title":"Weak population-genetic structure of a widely distributed nematode parasite of frogs in the western Palearctic","authors":"Peter Mikulíček,&nbsp;Michaela Mešková,&nbsp;Martin Cyprich,&nbsp;Daniel Jablonski,&nbsp;Petr Papežík,&nbsp;Diyar Hamidi,&nbsp;Çiğdem Akın Pekşen,&nbsp;Judit Vörös,&nbsp;David Herczeg,&nbsp;Michal Benovics","doi":"10.1111/jzs.12575","DOIUrl":"10.1111/jzs.12575","url":null,"abstract":"<p>The genetic structure of parasite populations is affected by various factors such as host–parasite interactions, life-history strategies, and the evolutionary histories of both interacting organisms. In this study, we investigated the distribution, prevalence, and population-genetic structure of <i>Icosiella neglecta</i> (Spirurida, Onchocercidae), a nematode parasite found in Ranidae frogs. We reported this parasite from eight species of water frogs (genus <i>Pelophylax</i>) in Europe, the Middle East, and Central Asia. Its prevalence across investigated localities varied from 3.03% to 95.83%. Based on nucleotide variation in a <i>28S ribosomal RNA</i> gene, all investigated <i>I. neglecta</i> sequences formed a well-supported phylogenetic clade and were placed in the sister position to the genus <i>Ochoterenella</i>. Despite the substantial genetic variability in a mitochondrial <i>cytochrome c oxidase subunit I (COI)</i> fragment (33 unique haplotypes recognized among 91 sequences), we found only weak population-genetic structure across the study area. There was no obvious association of <i>COI</i> haplotypes with geography, except haplotypes from eastern Turkey, Lebanon, and Iraq which formed a homogeneous, albeit only weakly differentiated group. The historical demographic analyses suggest that the species underwent a sudden and relatively recent population expansion. According to our results, we assume that the population-genetic structure of <i>I. neglecta</i> might be linked to the evolutionary history and dispersal of its dipteran vectors than water frog hosts.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":1.9,"publicationDate":"2021-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49153414","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
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