Movement EcologyPub Date : 2024-04-16DOI: 10.1186/s40462-024-00471-z
Kaitlyn M. Gaynor, Alex McInturff, Briana L. Abrahms, Alison M. Smith, Justin S. Brashares
{"title":"Hunting mode and habitat selection mediate the success of human hunters","authors":"Kaitlyn M. Gaynor, Alex McInturff, Briana L. Abrahms, Alison M. Smith, Justin S. Brashares","doi":"10.1186/s40462-024-00471-z","DOIUrl":"https://doi.org/10.1186/s40462-024-00471-z","url":null,"abstract":"As a globally widespread apex predator, humans have unprecedented lethal and non-lethal effects on prey populations and ecosystems. Yet compared to non-human predators, little is known about the movement ecology of human hunters, including how hunting behavior interacts with the environment. We characterized the hunting modes, habitat selection, and harvest success of 483 rifle hunters in California using high-resolution GPS data. We used Hidden Markov Models to characterize fine-scale movement behavior, and k-means clustering to group hunters by hunting mode, on the basis of their time spent in each behavioral state. Finally, we used Resource Selection Functions to quantify patterns of habitat selection for successful and unsuccessful hunters of each hunting mode. Hunters exhibited three distinct and successful hunting modes (“coursing”, “stalking”, and “sit-and-wait”), with coursings as the most successful strategy. Across hunting modes, there was variation in patterns of selection for roads, topography, and habitat cover, with differences in habitat use of successful and unsuccessful hunters across modes. Our study indicates that hunters can successfully employ a diversity of harvest strategies, and that hunting success is mediated by the interacting effects of hunting mode and landscape features. Such results highlight the breadth of human hunting modes, even within a single hunting technique, and lend insight into the varied ways that humans exert predation pressure on wildlife.","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"36 1","pages":""},"PeriodicalIF":4.1,"publicationDate":"2024-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140586935","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-04-16DOI: 10.1186/s40462-024-00470-0
Heather E. Gaya, Robert J. Cooper, Clayton D. Delancey, Jeffrey Hepinstall-Cymerman, Elizabeth A. Kurimo-Beechuk, William B. Lewis, Samuel A. Merker, Richard B. Chandler
{"title":"Clinging to the top: natal dispersal tracks climate gradient in a trailing-edge population of a migratory songbird","authors":"Heather E. Gaya, Robert J. Cooper, Clayton D. Delancey, Jeffrey Hepinstall-Cymerman, Elizabeth A. Kurimo-Beechuk, William B. Lewis, Samuel A. Merker, Richard B. Chandler","doi":"10.1186/s40462-024-00470-0","DOIUrl":"https://doi.org/10.1186/s40462-024-00470-0","url":null,"abstract":"Trailing-edge populations at the low-latitude, receding edge of a shifting range face high extinction risk from climate change unless they are able to track optimal environmental conditions through dispersal. We fit dispersal models to the locations of 3165 individually-marked black-throated blue warblers (Setophaga caerulescens) in the southern Appalachian Mountains in North Carolina, USA from 2002 to 2023. Black-throated blue warbler breeding abundance in this population has remained relatively stable at colder and wetter areas at higher elevations but has declined at warmer and drier areas at lower elevations. Median dispersal distance of young warblers was 917 m (range 23–3200 m), and dispersal tended to be directed away from warm and dry locations. In contrast, adults exhibited strong site fidelity between breeding seasons and rarely dispersed more than 100 m (range 10–1300 m). Consequently, adult dispersal kernels were much more compact and symmetric than natal dispersal kernels, suggesting adult dispersal is unlikely a driving force of declines in this population. Our findings suggest that directional natal dispersal may mitigate fitness costs for trailing-edge populations by allowing individuals to track changing climate and avoid warming conditions at warm-edge range boundaries.","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"2016 1","pages":""},"PeriodicalIF":4.1,"publicationDate":"2024-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140587004","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-04-02DOI: 10.1186/s40462-024-00463-z
Francesco Ventura, José Pedro Granadeiro, Paulo Catry, Carina Gjerdrum, Federico De Pascalis, Filipe Viveiros, Isamberto Silva, Dilia Menezes, Vítor H Paiva, Mónica C Silva
{"title":"Allochrony is shaped by foraging niche segregation rather than adaptation to the windscape in long-ranging seabirds","authors":"Francesco Ventura, José Pedro Granadeiro, Paulo Catry, Carina Gjerdrum, Federico De Pascalis, Filipe Viveiros, Isamberto Silva, Dilia Menezes, Vítor H Paiva, Mónica C Silva","doi":"10.1186/s40462-024-00463-z","DOIUrl":"https://doi.org/10.1186/s40462-024-00463-z","url":null,"abstract":"Ecological segregation allows populations to reduce competition and coexist in sympatry. Using as model organisms two closely related gadfly petrels endemic to the Madeira archipelago and breeding with a two month allochrony, we investigated how movement and foraging preferences shape ecological segregation in sympatric species. We tested the hypothesis that the breeding allochrony is underpinned by foraging niche segregation. Additionally, we investigated whether our data supported the hypothesis that allochrony is driven by species-specific adaptations to different windscapes. We present contemporaneous tracking and stable isotopes datasets for Zino’s (Pterodroma madeira) and Desertas (Pterodroma deserta) petrels. We quantified the year-round distribution of the petrels, characterised their isotopic niches and quantified their habitat preferences using machine learning (boosted regression trees). Hidden-Markov-models were used to investigate the effect of wind on the central-place movement speed, and a simulation framework was developed to investigate whether each species breeds at times when the windscape is most favourable to sustain their trips. Despite substantial spatial overlap throughout the year, the petrels exhibited diverging isotopic niches and habitat preferences during breeding. Both species used a vast pelagic region in the North Atlantic, but targeted two different mesopelagic ecoregions and showed a preference for habitats mostly differing in sea surface temperature values. Based on our simulation framework, we found that both species would perform trips of similar speed during the other species’ breeding season. The different breeding schedules between the species are underpinned by differences in foraging habitat preferences and adaptation to the local environment, rather than to the windscape. Nevertheless, the larger Desertas petrels exploited significantly windier conditions, potentially unsustainable for the smaller Zino’s petrels. Furthermore, due to larger mass and likely higher fasting endurance, Desertas petrels engaged in central-place-foraging movements that covered more ground and lasted longer than those of Zino’s petrels. Ultimately, patterns of ecological segregation in sympatric seabirds are shaped by a complex interplay between foraging and movement ecology, where morphology, foraging trip regulation and fasting endurance have an important– yet poorly understood– role.","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"74 1","pages":""},"PeriodicalIF":4.1,"publicationDate":"2024-04-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140586742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Agricultural habitat use and selection by a sedentary bird over its annual life cycle in a crop-depredation context.","authors":"Rémi Chambon, Jean-Marc Paillisson, Jérôme Fournier-Sowinski, Sébastien Dugravot","doi":"10.1186/s40462-024-00462-0","DOIUrl":"10.1186/s40462-024-00462-0","url":null,"abstract":"<p><strong>Background: </strong>Modern agriculture has undoubtedly led to increasing wildlife-human conflicts, notably concerning bird damage in productive and attractive crops during some parts of the annual cycle. This issue requires utmost attention for sedentary birds that may impact agricultural crops at any stage of their annual life cycle. Reducing bird-human conflicts requires a better understanding of the relationship between bird foraging activity and the characteristics of agricultural areas, notably with respect to changes in food-resource availability and crop sensitivity across the year.</p><p><strong>Methods: </strong>We explored how GPS-tagged adult male western jackdaws- sedentary corvids- utilize agricultural areas throughout their annual cycle, in a context of crop depredation. More precisely, we described their daily occurrence distribution and the extent of habitat use and selection consistency with respect to landscape composition across time.</p><p><strong>Results: </strong>Jackdaws moved in the close agricultural surroundings of their urban nesting place over the year (< 2.5 km from the nest, on average). Daily occurrence distributions were restricted (< 2.2 km<sup>2</sup>), relatively centered on the nesting locality (distance between the daily occurrence centroid and the nest < 0.9 km), and rather spatially stable during each annual life-cycle period (overlap range: 63.4-76.1%). Their foraging patterns highlighted that they fed mainly in grasslands all year round, and foraged complementarily and opportunistically in maize (during sowing- coinciding with the first stages of the birds' breeding period) and cereal crops (during harvesting- their post-fledging period).</p><p><strong>Conclusions: </strong>Our findings demonstrate the very limited space use by breeding male jackdaws which foraged preferentially in grasslands. We call for future investigations in other agricultural contexts and also considering non-breeders for extrapolation purposes.</p>","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"12 1","pages":"26"},"PeriodicalIF":4.1,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10981352/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140327417","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-03-28DOI: 10.1186/s40462-024-00457-x
Regis Thedin, David Brandes, Eliot Quon, Rimple Sandhu, Charles Tripp
{"title":"A three-dimensional model of terrain-induced updrafts for movement ecology studies","authors":"Regis Thedin, David Brandes, Eliot Quon, Rimple Sandhu, Charles Tripp","doi":"10.1186/s40462-024-00457-x","DOIUrl":"https://doi.org/10.1186/s40462-024-00457-x","url":null,"abstract":"Spatially explicit simulation models of animal movements through the atmosphere necessarily require a representation of the spatial and temporal variation of atmospheric conditions. In particular, for movements of soaring birds that rely extensively on vertical updrafts to avoid flapping flight, accurate and reliable estimation of the vertical component of wind is critical. The interaction between wind and complex terrain shapes both the horizontal and vertical wind fields, highlighting the need to model the coupling between local terrain features and atmospheric conditions at scales relevant to animal movement. In this work, we propose a new empirical model for estimating the orographic updraft field. The model is developed using computational fluid dynamics simulations of canonical atmospheric conditions over moderately complex terrain. To isolate buoyancy and thermal effects, and focus on terrain-induced effects, we use only simulations of a neutrally stratified atmosphere to develop the model. The model, which we name Engineering Vertical Velocity Estimator (EVVE), is simple to implement and is a function of the underlying terrain elevation map, the desired height above ground level (AGL), and wind conditions at a reference height (80 m). We validate the model with data from the Alaiz mountain (Spain) field campaign. Compared to observations, the proposed improved model estimates the updrafts at 120 m AGL with a mean error of 0.11 m/s ( $$sigma =0.28$$ m/s), compared to 0.85 m/s ( $$sigma =0.58$$ m/s) for its baseline. For typical land-based wind turbine hub heights of 80 m AGL, the proposed model has a mean error of 0.04 m/s ( $$sigma =0.25$$ m/s), compared to baseline 0.54 m/s ( $$sigma =0.45$$ m/s) estimations. We illustrate an application of the model in movement ecology by comparing simulated tracks and presence maps of golden eagles (Aquila chrysaetos) moving across two distinct landscapes. The tracks and presence maps are obtained using a simple heuristic-based movement model, with the updraft field given by the proposed model and a wind vector-based estimation approach that is currently in wide use in movement ecology studies of raptors and other soaring birds. We highlight that movement model results can be sensitive to the underlying orographic updraft model, especially in studies of fine-scale movements in regions of complex topography. We suggest adopting the proposed model rather than the wind vector estimation method for studies of soaring bird movements.","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"140 1","pages":""},"PeriodicalIF":4.1,"publicationDate":"2024-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140315490","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-03-27DOI: 10.1186/s40462-024-00453-1
Julius G Bright Ross, Andrew Markham, Christina D Buesching, Catherine Hambly, John R Speakman, David W Macdonald, Chris Newman
{"title":"Links between energy budgets, somatic condition, and life history reveal heterogeneous energy management tactics in a group-living mesocarnivore.","authors":"Julius G Bright Ross, Andrew Markham, Christina D Buesching, Catherine Hambly, John R Speakman, David W Macdonald, Chris Newman","doi":"10.1186/s40462-024-00453-1","DOIUrl":"10.1186/s40462-024-00453-1","url":null,"abstract":"<p><strong>Background: </strong>Optimal management of voluntary energy expenditure is crucial to the survival and reproductive success of wild animals. Nevertheless, a growing appreciation of inter-individual variation in the internal state driving movement suggests that individuals may follow different, yet equally optimal tactics under the same environmental conditions. However, few studies in wild populations have investigated the occurrence and demographic context of different contemporaneous energetic expenditure tactics. Here, we explore this neglected aspect of energy budgeting in order to determine the effect of life-history traits such as age and reproductive status on the co-occurrence of different energy-budgeting tactics in wild populations.</p><p><strong>Methods: </strong>We investigated inter-individual heterogeneity in energy expenditure within a wild population of European badgers (Meles meles) by quantifying individual overall dynamic body acceleration (ODBA, from tri-axial accelerometry collars) and total daily energy expenditure (DEE, from doubly-labelled water) during 6-9 day deployments and dosing periods over six different seasons (spring, summer, and autumn) in 2018-2019. We obtained ODBA values for 41 deployments (24 unique badgers) and DEE measurements for 41 dosings (22 unique badgers). We then evaluated correlations between these energetic metrics and computed individual ratios of ODBA/DEE as a proxy for the proportion of total energy spent on activity. We measured the impact of alternative ODBA/DEE ratios on body condition, and use survival models constructed using 29 years of demographic data from the same population to situate body-condition changes in the context of age and reproductive status.</p><p><strong>Results: </strong>Both ODBA and DEE were highly variable between individuals and exhibited season-specific relationships with individual body condition and life-history factors. DEE scaled allometrically with body weight, but only in summer and autumn; post-reproductive female badgers were lighter than other badgers during the spring but expended on average 350 kJ/day more than predicted from allometric scaling. Older badgers expended significantly less energy on movement during the summer than did younger adults. The ratio of ODBA to DEE (OD) provides a measure of proportional investment into movement. This ratio correlated more significantly with next-season body condition than either energetic metric did independently. However, the majority of individuals with high OD ratios were either younger badgers or reproductive females, for which lower body condition typically presented less of a mortality risk in previous analyses of this population.</p><p><strong>Conclusions: </strong>Within a single population under the same environmental conditions, we found wide inter-individual variation in both mechanical and total energy expenditure. The adoption of different tactics aligns with relationships between life-histo","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"12 1","pages":"24"},"PeriodicalIF":4.1,"publicationDate":"2024-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10976844/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140307881","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-03-25DOI: 10.1186/s40462-024-00465-x
E Brigatti, B Ríos-Uzeda, M V Vieira
{"title":"Exploring the interplay between small and large scales movements in a neotropical small mammal.","authors":"E Brigatti, B Ríos-Uzeda, M V Vieira","doi":"10.1186/s40462-024-00465-x","DOIUrl":"10.1186/s40462-024-00465-x","url":null,"abstract":"<p><p>We record and analyze the movement patterns of the marsupial Didelphis aurita at different temporal scales. Animals trajectories are collected at a daily scale by using spool-and-line techniques and, with the help of radio-tracking devices, animals traveled distances are estimated at intervals of weeks. Small-scale movements are well described by truncated Lévy flight, while large-scale movements produce a distribution of distances which is compatible with a Brownian motion. A model of the movement behavior of these animals, based on a truncated Lévy flight calibrated on the small scale data, converges towards a Brownian behavior after a short time interval of the order of 1 week. These results show that whether Lévy flight or Brownian motion behaviors apply, will depend on the scale of aggregation of the animals paths. In this specific case, as the effect of the rude truncation present in the daily data generates a fast convergence towards Brownian behaviors, Lévy flights become of scarce interest for describing the local dispersion properties of these animals, which result well approximated by a normal diffusion process and not a fast, anomalous one. Interestingly, we are able to describe two movement phases as the consequence of a statistical effect generated by aggregation, without the necessity of introducing ecological constraints or mechanisms operating at different spatio-temporal scales. This result is of general interest, as it can be a key element for describing movement phenomenology at distinct spatio-temporal scales across different taxa and in a variety of systems.</p>","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"12 1","pages":"23"},"PeriodicalIF":4.1,"publicationDate":"2024-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10964637/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140289655","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-03-22DOI: 10.1186/s40462-024-00459-9
Rob S A van Bemmelen, Børge Moe, Hans Schekkerman, Sveinn Are Hansen, Katherine R S Snell, Elizabeth M Humphreys, Elina Mäntylä, Gunnar Thor Hallgrimsson, Olivier Gilg, Dorothée Ehrich, John Calladine, Sjúrður Hammer, Sarah Harris, Johannes Lang, Sölvi Rúnar Vignisson, Yann Kolbeinsson, Kimmo Nuotio, Matti Sillanpää, Benoît Sittler, Aleksandr Sokolov, Raymond H G Klaassen, Richard A Phillips, Ingrid Tulp
{"title":"Synchronous timing of return to breeding sites in a long-distance migratory seabird with ocean-scale variation in migration schedules.","authors":"Rob S A van Bemmelen, Børge Moe, Hans Schekkerman, Sveinn Are Hansen, Katherine R S Snell, Elizabeth M Humphreys, Elina Mäntylä, Gunnar Thor Hallgrimsson, Olivier Gilg, Dorothée Ehrich, John Calladine, Sjúrður Hammer, Sarah Harris, Johannes Lang, Sölvi Rúnar Vignisson, Yann Kolbeinsson, Kimmo Nuotio, Matti Sillanpää, Benoît Sittler, Aleksandr Sokolov, Raymond H G Klaassen, Richard A Phillips, Ingrid Tulp","doi":"10.1186/s40462-024-00459-9","DOIUrl":"10.1186/s40462-024-00459-9","url":null,"abstract":"<p><strong>Background: </strong>Migratory birds generally have tightly scheduled annual cycles, in which delays can have carry-over effects on the timing of later events, ultimately impacting reproductive output. Whether temporal carry-over effects are more pronounced among migrations over larger distances, with tighter schedules, is a largely unexplored question.</p><p><strong>Methods: </strong>We tracked individual Arctic Skuas Stercorarius parasiticus, a long-distance migratory seabird, from eight breeding populations between Greenland and Siberia using light-level geolocators. We tested whether migration schedules among breeding populations differ as a function of their use of seven widely divergent wintering areas across the Atlantic Ocean, Mediterranean Sea and Indian Ocean.</p><p><strong>Results: </strong>Breeding at higher latitudes led not only to later reproduction and migration, but also faster spring migration and shorter time between return to the breeding area and clutch initiation. Wintering area was consistent within individuals among years; and more distant areas were associated with more time spent on migration and less time in the wintering areas. Skuas adjusted the period spent in the wintering area, regardless of migration distance, which buffered the variation in timing of autumn migration. Choice of wintering area had only minor effects on timing of return at the breeding area and timing of breeding and these effects were not consistent between breeding populations.</p><p><strong>Conclusion: </strong>The lack of a consistent effect of wintering area on timing of return between breeding areas indicates that individuals synchronize their arrival with others in their population despite extensive individual differences in migration strategies.</p>","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"12 1","pages":"22"},"PeriodicalIF":4.1,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10960466/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140195092","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-03-15DOI: 10.1186/s40462-024-00464-y
Cameron Freshwater, Sean C Anderson, David D Huff, Joseph M Smith, Doug Jackson, Brian Hendriks, Scott G Hinch, Stephen Johnston, Andrew W Trites, Jackie King
{"title":"Chinook salmon depth distributions on the continental shelf are shaped by interactions between location, season, and individual condition.","authors":"Cameron Freshwater, Sean C Anderson, David D Huff, Joseph M Smith, Doug Jackson, Brian Hendriks, Scott G Hinch, Stephen Johnston, Andrew W Trites, Jackie King","doi":"10.1186/s40462-024-00464-y","DOIUrl":"10.1186/s40462-024-00464-y","url":null,"abstract":"<p><strong>Background: </strong>Ecological and physical conditions vary with depth in aquatic ecosystems, resulting in gradients of habitat suitability. Although variation in vertical distributions among individuals provides evidence of habitat selection, it has been challenging to disentangle how processes at multiple spatio-temporal scales shape behaviour.</p><p><strong>Methods: </strong>We collected thousands of observations of depth from <math><mrow><mo>></mo> <mspace></mspace> <mn>300</mn></mrow> </math> acoustically tagged adult Chinook salmon Oncorhynchus tshawytscha, spanning multiple seasons and years. We used these data to parameterize a machine-learning model to disentangle the influence of spatial, temporal, and dynamic oceanographic variables while accounting for differences in individual condition and maturation stage.</p><p><strong>Results: </strong>The top performing machine learning model used bathymetric depth ratio (i.e., individual depth relative to seafloor depth) as a response. We found that bathymetry, season, maturation stage, and spatial location most strongly influenced Chinook salmon depth. Chinook salmon bathymetric depth ratios were deepest in shallow water, during winter, and for immature individuals. We also identified non-linear interactions among covariates, resulting in spatially-varying effects of zooplankton concentration, lunar cycle, temperature and oxygen concentration.</p><p><strong>Conclusions: </strong>Our results suggest Chinook salmon vertical habitat use is a function of ecological interactions, not physiological constraints. Temporal and spatial variation in depth distributions could be used to guide management decisions intended to reduce fishery impacts on Chinook salmon. More generally, our findings demonstrate how complex interactions among bathymetry, seasonality, location, and life history stage regulate vertical habitat selection.</p>","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"12 1","pages":"21"},"PeriodicalIF":3.4,"publicationDate":"2024-03-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11337652/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140141156","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Movement EcologyPub Date : 2024-03-09DOI: 10.1186/s40462-024-00460-2
Rongxiang Su, Yifei Liu, Somayeh Dodge
{"title":"ORTEGA v1.0: an open-source Python package for context-aware interaction analysis using movement data.","authors":"Rongxiang Su, Yifei Liu, Somayeh Dodge","doi":"10.1186/s40462-024-00460-2","DOIUrl":"10.1186/s40462-024-00460-2","url":null,"abstract":"<p><strong>Background: </strong>Interaction analysis via movement in space and time contributes to understanding social relationships among individuals and their dynamics in ecological systems. While there is an exciting growth in research in computational methods for interaction analysis using movement data, there remain challenges regarding reproducibility and replicability of the existing approaches. The current movement interaction analysis tools are often less accessible or tested for broader use in ecological research.</p><p><strong>Results: </strong>To address these challenges, this paper presents ORTEGA, an Object-oRiented TimE-Geographic Analytical tool, as an open-source Python package for analyzing potential interactions between pairs of moving entities based on the observation of their movement. ORTEGA is developed based on one of the newly emerged time-geographic approaches for quantifying space-time interaction patterns among animals. A case study is presented to demonstrate and evaluate the functionalities of ORTEGA in tracing dynamic interaction patterns in animal movement data. Besides making the analytical code and data freely available to the community, the developed package also offers an extension of the existing theoretical development of ORTEGA for incorporating a context-aware ability to inform interaction analysis.</p><p><strong>Conclusions: </strong>ORTEGA contributes two significant capabilities: (1) the functions to identify potential interactions (e.g., encounters, concurrent interactions, delayed interactions) from movement data of two or more entities using a time-geographic-based approach; and (2) the capacity to compute attributes of potential interaction events including start time, end time, interaction duration, and difference in movement parameters such as speed and moving direction, and also contextualize the identified potential interaction events.</p>","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"12 1","pages":"20"},"PeriodicalIF":4.1,"publicationDate":"2024-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10925014/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140068960","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}