Frontiers in Big Data最新文献

{"title":"Exploring dermoscopic structures for melanoma lesions' classification.","authors":"Fiza Saeed Malik, Muhammad Haroon Yousaf, Hassan Ahmed Sial, Serestina Viriri","doi":"10.3389/fdata.2024.1366312","DOIUrl":"https://doi.org/10.3389/fdata.2024.1366312","url":null,"abstract":"<p><strong>Background: </strong>Melanoma is one of the deadliest skin cancers that originate from melanocytes due to sun exposure, causing mutations. Early detection boosts the cure rate to 90%, but misclassification drops survival to 15-20%. Clinical variations challenge dermatologists in distinguishing benign nevi and melanomas. Current diagnostic methods, including visual analysis and dermoscopy, have limitations, emphasizing the need for Artificial Intelligence understanding in dermatology.</p><p><strong>Objectives: </strong>In this paper, we aim to explore dermoscopic structures for the classification of melanoma lesions. The training of AI models faces a challenge known as brittleness, where small changes in input images impact the classification. A study explored AI vulnerability in discerning melanoma from benign lesions using features of size, color, and shape. Tests with artificial and natural variations revealed a notable decline in accuracy, emphasizing the necessity for additional information, such as dermoscopic structures.</p><p><strong>Methodology: </strong>The study utilizes datasets with clinically marked dermoscopic images examined by expert clinicians. Transformers and CNN-based models are employed to classify these images based on dermoscopic structures. Classification results are validated using feature visualization. To assess model susceptibility to image variations, classifiers are evaluated on test sets with original, duplicated, and digitally modified images. Additionally, testing is done on ISIC 2016 images. The study focuses on three dermoscopic structures crucial for melanoma detection: Blue-white veil, dots/globules, and streaks.</p><p><strong>Results: </strong>In evaluating model performance, adding convolutions to Vision Transformers proves highly effective for achieving up to 98% accuracy. CNN architectures like VGG-16 and DenseNet-121 reach 50-60% accuracy, performing best with features other than dermoscopic structures. Vision Transformers without convolutions exhibit reduced accuracy on diverse test sets, revealing their brittleness. OpenAI Clip, a pre-trained model, consistently performs well across various test sets. To address brittleness, a mitigation method involving extensive data augmentation during training and 23 transformed duplicates during test time, sustains accuracy.</p><p><strong>Conclusions: </strong>This paper proposes a melanoma classification scheme utilizing three dermoscopic structures across Ph2 and Derm7pt datasets. The study addresses AI susceptibility to image variations. Despite a small dataset, future work suggests collecting more annotated datasets and automatic computation of dermoscopic structural features.</p>","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1366312"},"PeriodicalIF":3.1,"publicationDate":"2024-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10999676/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140869541","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Urban delineation through a prism of intraday commute patterns.","authors":"Yuri Bogomolov, Alexander Belyi, Stanislav Sobolevsky","doi":"10.3389/fdata.2024.1356116","DOIUrl":"https://doi.org/10.3389/fdata.2024.1356116","url":null,"abstract":"<p><strong>Introduction: </strong>Urban mobility patterns are crucial for effective urban and transportation planning. This study investigates the dynamics of urban mobility in Brno, Czech Republic, utilizing the rich dataset provided by passive mobile phone data. Understanding these patterns is essential for optimizing infrastructure and planning strategies.</p><p><strong>Methods: </strong>We developed a methodological framework that incorporates bidirectional commute flows and integrates both urban and suburban commute networks. This comprehensive approach allows for a detailed representation of Brno's mobility landscape. By employing clustering techniques, we aimed to identify distinct mobility patterns within the city.</p><p><strong>Results: </strong>Our analysis revealed consistent structural features within Brno's mobility patterns. We identified three distinct clusters: a central business district, residential communities, and an intermediate hybrid cluster. These clusters highlight the diversity of mobility demands across different parts of the city.</p><p><strong>Discussion: </strong>The study demonstrates the significant potential of passive mobile phone data in enhancing our understanding of urban mobility patterns. The insights gained from intraday mobility data are invaluable for transportation planning decisions, allowing for the optimization of infrastructure utilization. The identification of distinct mobility patterns underscores the practical utility of our methodological advancements in informing more effective and efficient transportation planning strategies.</p>","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1356116"},"PeriodicalIF":3.1,"publicationDate":"2024-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10948430/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140177714","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Predicting risk of preterm birth in singleton pregnancies using machine learning algorithms.","authors":"Qiu-Yan Yu, Ying Lin, Yu-Run Zhou, Xin-Jun Yang, Joris Hemelaar","doi":"10.3389/fdata.2024.1291196","DOIUrl":"10.3389/fdata.2024.1291196","url":null,"abstract":"<p><p>We aimed to develop, train, and validate machine learning models for predicting preterm birth (<37 weeks' gestation) in singleton pregnancies at different gestational intervals. Models were developed based on complete data from 22,603 singleton pregnancies from a prospective population-based cohort study that was conducted in 51 midwifery clinics and hospitals in Wenzhou City of China between 2014 and 2016. We applied Catboost, Random Forest, Stacked Model, Deep Neural Networks (DNN), and Support Vector Machine (SVM) algorithms, as well as logistic regression, to conduct feature selection and predictive modeling. Feature selection was implemented based on permutation-based feature importance lists derived from the machine learning models including all features, using a balanced training data set. To develop prediction models, the top 10%, 25%, and 50% most important predictive features were selected. Prediction models were developed with the training data set with 5-fold cross-validation for internal validation. Model performance was assessed using area under the receiver operating curve (AUC) values. The CatBoost-based prediction model after 26 weeks' gestation performed best with an AUC value of 0.70 (0.67, 0.73), accuracy of 0.81, sensitivity of 0.47, and specificity of 0.83. Number of antenatal care visits before 24 weeks' gestation, aspartate aminotransferase level at registration, symphysis fundal height, maternal weight, abdominal circumference, and blood pressure emerged as strong predictors after 26 completed weeks. The application of machine learning on pregnancy surveillance data is a promising approach to predict preterm birth and we identified several modifiable antenatal predictors.</p>","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1291196"},"PeriodicalIF":3.1,"publicationDate":"2024-02-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10941650/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140144558","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Efficacy of federated learning on genomic data: a study on the UK Biobank and the 1000 Genomes Project.","authors":"Dmitry Kolobkov, Satyarth Mishra Sharma, Aleksandr Medvedev, Mikhail Lebedev, Egor Kosaretskiy, Ruslan Vakhitov","doi":"10.3389/fdata.2024.1266031","DOIUrl":"10.3389/fdata.2024.1266031","url":null,"abstract":"<p><p>Combining training data from multiple sources increases sample size and reduces confounding, leading to more accurate and less biased machine learning models. In healthcare, however, direct pooling of data is often not allowed by data custodians who are accountable for minimizing the exposure of sensitive information. Federated learning offers a promising solution to this problem by training a model in a decentralized manner thus reducing the risks of data leakage. Although there is increasing utilization of federated learning on clinical data, its efficacy on individual-level genomic data has not been studied. This study lays the groundwork for the adoption of federated learning for genomic data by investigating its applicability in two scenarios: phenotype prediction on the UK Biobank data and ancestry prediction on the 1000 Genomes Project data. We show that federated models trained on data split into independent nodes achieve performance close to centralized models, even in the presence of significant inter-node heterogeneity. Additionally, we investigate how federated model accuracy is affected by communication frequency and suggest approaches to reduce computational complexity or communication costs.</p>","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1266031"},"PeriodicalIF":3.1,"publicationDate":"2024-02-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10937521/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140133172","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Knowledge-based recommender systems: overview and research directions.","authors":"Mathias Uta, Alexander Felfernig, Viet-Man Le, Thi Ngoc Trang Tran, Damian Garber, Sebastian Lubos, Tamim Burgstaller","doi":"10.3389/fdata.2024.1304439","DOIUrl":"10.3389/fdata.2024.1304439","url":null,"abstract":"<p><p>Recommender systems are decision support systems that help users to identify items of relevance from a potentially large set of alternatives. In contrast to the mainstream recommendation approaches of collaborative filtering and content-based filtering, knowledge-based recommenders exploit semantic user preference knowledge, item knowledge, and recommendation knowledge, to identify user-relevant items which is of specific relevance when dealing with complex and high-involvement items. Such recommenders are primarily applied in scenarios where users specify (and revise) their preferences, and related recommendations are determined on the basis of constraints or attribute-level similarity metrics. In this article, we provide an overview of the existing state-of-the-art in knowledge-based recommender systems. Different related recommendation techniques are explained on the basis of a working example from the domain of survey software services. On the basis of our analysis, we outline different directions for future research.</p>","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1304439"},"PeriodicalIF":3.1,"publicationDate":"2024-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10925703/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140102782","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Editorial: Internet of Medical Things and computational intelligence in healthcare 4.0.","authors":"Sujata Dash, Subhendu Kumar Pani, Wellington Pinheiro Dos Santos","doi":"10.3389/fdata.2024.1368581","DOIUrl":"10.3389/fdata.2024.1368581","url":null,"abstract":"","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1368581"},"PeriodicalIF":3.1,"publicationDate":"2024-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10916686/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140050980","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Editorial: Cyber security in the wake of fourth industrial revolution: opportunities and challenges.","authors":"Elochukwu Ukwandu, Chaminda Hewage, Hanan Hindy","doi":"10.3389/fdata.2024.1369159","DOIUrl":"https://doi.org/10.3389/fdata.2024.1369159","url":null,"abstract":"","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1369159"},"PeriodicalIF":3.1,"publicationDate":"2024-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10915258/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140050979","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Optimizing multi-objective task scheduling in fog computing with GA-PSO algorithm for big data application.","authors":"Muhammad Saad, Rabia Noor Enam, Rehan Qureshi","doi":"10.3389/fdata.2024.1358486","DOIUrl":"10.3389/fdata.2024.1358486","url":null,"abstract":"<p><p>As the volume and velocity of Big Data continue to grow, traditional cloud computing approaches struggle to meet the demands of real-time processing and low latency. Fog computing, with its distributed network of edge devices, emerges as a compelling solution. However, efficient task scheduling in fog computing remains a challenge due to its inherently multi-objective nature, balancing factors like execution time, response time, and resource utilization. This paper proposes a hybrid Genetic Algorithm (GA)-Particle Swarm Optimization (PSO) algorithm to optimize multi-objective task scheduling in fog computing environments. The hybrid approach combines the strengths of GA and PSO, achieving effective exploration and exploitation of the search space, leading to improved performance compared to traditional single-algorithm approaches. The proposed hybrid algorithm results improved the execution time by 85.68% when compared with GA algorithm, by 84% when compared with Hybrid PWOA and by 51.03% when compared with PSO algorithm as well as it improved the response time by 67.28% when compared with GA algorithm, by 54.24% when compared with Hybrid PWOA and by 75.40% when compared with PSO algorithm as well as it improved the completion time by 68.69% when compared with GA algorithm, by 98.91% when compared with Hybrid PWOA and by 75.90% when compared with PSO algorithm when various tasks inputs are given. The proposed hybrid algorithm results also improved the execution time by 84.87% when compared with GA algorithm, by 88.64% when compared with Hybrid PWOA and by 85.07% when compared with PSO algorithm it improved the response time by 65.92% when compared with GA algorithm, by 80.51% when compared with Hybrid PWOA and by 85.26% when compared with PSO algorithm as well as it improved the completion time by 67.60% when compared with GA algorithm, by 81.34% when compared with Hybrid PWOA and by 85.23% when compared with PSO algorithm when various fog nodes are given.</p>","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1358486"},"PeriodicalIF":3.1,"publicationDate":"2024-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10915077/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140050981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Editorial: Big scientific data analytics on HPC and cloud.","authors":"Jianwu Wang, Junqi Yin, Mai H Nguyen, Jingbo Wang, Weijia Xu","doi":"10.3389/fdata.2024.1353988","DOIUrl":"https://doi.org/10.3389/fdata.2024.1353988","url":null,"abstract":"","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"7 ","pages":"1353988"},"PeriodicalIF":3.1,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10912602/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140050978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Trends of the COVID-19 dynamics in 2022 and 2023 vs. the population age, testing and vaccination levels","authors":"I. Nesteruk","doi":"10.3389/fdata.2023.1355080","DOIUrl":"https://doi.org/10.3389/fdata.2023.1355080","url":null,"abstract":"The population, governments, and researchers show much less interest in the COVID-19 pandemic. However, many questions still need to be answered: why the much less vaccinated African continent has accumulated 15 times less deaths per capita than Europe? or why in 2023 the global value of the case fatality risk is almost twice higher than in 2022 and the UK figure is four times higher than the global one?The averaged daily numbers of cases DCC and death DDC per million, case fatality risks DDC/DCC were calculated for 34 countries and regions with the use of John Hopkins University (JHU) datasets. Possible linear and non-linear correlations with the averaged daily numbers of tests per thousand DTC, median age of population A, and percentages of vaccinations VC and boosters BC were investigated.Strong correlations between age and DCC and DDC values were revealed. One-year increment in the median age yielded 39.8 increase in DCC values and 0.0799 DDC increase in 2022 (in 2023 these figures are 5.8 and 0.0263, respectively). With decreasing of testing level DTC, the case fatality risk can increase drastically. DCC and DDC values increase with increasing the percentages of fully vaccinated people and boosters, which definitely increase for greater A. After removing the influence of age, no correlations between vaccinations and DCC and DDC values were revealed.The presented analysis demonstrates that age is a pivot factor of visible (registered) part of the COVID-19 pandemic dynamics. Much younger Africa has registered less numbers of cases and death per capita due to many unregistered asymptomatic patients. Of great concern is the fact that COVID-19 mortality in 2023 in the UK is still at least 4 times higher than the global value caused by seasonal flu.","PeriodicalId":52859,"journal":{"name":"Frontiers in Big Data","volume":"92 20","pages":""},"PeriodicalIF":3.1,"publicationDate":"2024-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139440171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}