International Journal of Developmental Biology最新文献

{"title":"Anatomical and genetic bases underlying the convergent evolution of fleshy and dry dehiscent fruits in <i>Cestrum</i> and <i>Brugmansia</i> (Solanaceae).","authors":"Natalí Hernández-Ciro,&nbsp;Natalia Pabón-Mora","doi":"10.1387/ijdb.200080np","DOIUrl":"https://doi.org/10.1387/ijdb.200080np","url":null,"abstract":"<p><p>The mechanisms controlling evolutionary shifts between dry and fleshy fruits in angiosperms are poorly understood. In Solanaceae, <i>Cestrum</i> and <i>Brugmansia</i> represent cases of convergent evolution of fleshy and dry fruits, respectively. Here we study the anatomical and genetic bases of the independent origin of fleshy fruits in <i>Cestrum</i> and the reversion to dry dehiscent fruits in <i>Brugmansia</i>. We also characterize the expression of candidate fruit development genes, including <i>ALCATRAZ/SPATULA, FRUITFULL, HECATE1/2/3, REPLUMLESS</i> and <i>SHATTERPROOF</i>. We identify anatomical changes to establish developmental stages in the ovary-to-fruit transition in <i>Cestrum nocturnum</i> and <i>Brugmansia suaveolens</i>. We generate reference transcriptomes for both species, isolate homologs for all genes in the fruit genetic regulatory network (GRN) and perform gene expression analyses for <i>ALC/SPT, FUL, HEC1/2/3, RPL</i> and <i>SHP</i> throughout fruit development. Finally, we compare our results to expression patterns found in typical capsules of <i>Nicotiana tabacum</i> and berries of <i>Solanum lycopersicum</i> available in public repositories. We have identified homologous, homoplasious and unique anatomical features in <i>C. nocturnum</i> and <i>B. suaveolens</i> fruits, resulting in their final appearance. Expression patterns suggest that <i>FUL</i>, <i>SHP</i> and <i>SPT</i> might control homologous characteristics, while <i>ALC</i> and <i>RPL</i> likely contribute to homoplasious anatomical features. The fruit GRN changes considerably in these genera when compared to typical capsules and berries of Solanaceae, particularly in <i>B. suaveolens,</i> where expression of <i>FUL2</i> and <i>RPL1</i> is lacking.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 4-5-6","pages":"301-311"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200080np","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38382571","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Mechanisms of vertebrate neural plate internalization.","authors":"Claudio Araya,&nbsp;Daniela Carrasco","doi":"10.1387/ijdb.200122ca","DOIUrl":"https://doi.org/10.1387/ijdb.200122ca","url":null,"abstract":"<p><p>The internalization of multi-cellular tissues is a key morphogenetic process during animal development and organ formation. A good example of this is the initial stages of vertebrate central nervous system formation whereby a transient embryonic structure called the neural plate is able to undergo collective cell rearrangements within the dorsal midline. Despite the fact that defects in neural plate midline internalization may result in a series of severe clinical conditions, such as spina bifida and anencephaly, the biochemical and biomechanical details of this process remain only partially characterized. Here we review the main cellular and molecular mechanisms underlying midline cell and tissue internalization during vertebrate neural tube formation. We discuss the contribution of collective cell mechanisms including convergence and extension, as well as apical constriction facilitating midline neural plate shaping. Furthermore, we summarize recent studies that shed light on how the interplay of signaling pathways and cell biomechanics modulate neural plate internalization. In addition, we discuss how adhesion-dependent cell-cell contact appears to be a critical component during midline cell convergence and surface cell contraction via cell-cell mechanical coupling. We envision that more detailed high-resolution quantitative data at both cell and tissue levels will be required to properly model the mechanisms of vertebrate neural plate internalization with the hope of preventing human neural tube defects.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 4-5-6","pages":"263-273"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200122ca","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38380163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Developmental Biology in México.","authors":"Horacio Merchant-Larios","doi":"10.1387/ijdb.200133hm","DOIUrl":"https://doi.org/10.1387/ijdb.200133hm","url":null,"abstract":"<p><p>Contemporary scientific endeavor in México emanates from two great public institutions: the Universidad Nacional Autónoma de México (UNAM) and the Instituto Politécnico Nacional (IPN), founded in 1929 and 1936, respectively. Here, the first research institutes and centers dedicated to various scientific areas were created. Thus, the origin of most laboratories of Developmental Biology in México was like that of other scientific fields. In this article, I have attempted to describe the establishment of a specialized community involved in the understanding of organism development during ontogeny. The use of chick embryos to study heart development was among the first experimental approaches developed in México. Then, a younger group employed chick embryos to study the mechanisms underlying limb development. Various laboratory animal models have been employed, including mouse, rat, rabbit, and recently the naked mole-rat, as well as some wild species, such as sea turtles and bats. Two classical invertebrates, <i>Drosophila melanogaster,</i> and <i>Caenorhadbitis elegans,</i> also form part of the multilayered complex models used by Mexican developmental biologists. My use of animals brought me closer to the pioneer developmental biologists who worked with animal models. Their academic trajectory was more detailed than that of investigators using plant models. However, the pioneering merit and bright contributions of the two groups are on a par, regardless of the biological model. As current scientific knowledge is the sum of individual contributions throughout human history, here I have attempted to describe my suitable experience as a witness to the birth of the fascinating field of developmental biology in my country.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 1-2-3","pages":"59-70"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200133hm","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38380166","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Morphogenesis of the lens placode.","authors":"Cecília G Magalhães,&nbsp;Maraysa De Oliveira-Melo,&nbsp;C Y Irene Yan","doi":"10.1387/ijdb.200162iy","DOIUrl":"https://doi.org/10.1387/ijdb.200162iy","url":null,"abstract":"<p><p>For over 100 years, the vertebrate eye has been an important model system to understand cell induction, cell shape change, and morphogenesis during development. In the past, most of the studies examined histological changes to detect the presence of induction mechanisms, but the advancement of molecular biology techniques has made exploring the genetic mechanisms behind lens development possible. Despite the particular emphasis given to the induction of the lens placode, there are still many aspects of the cell biology of lens morphogenesis to be explored. Here, we will revisit the classical detailed description of early lens morphological changes, correlating it with the cell biology mechanisms and with the molecules and signaling pathways identified up to now in chick and mouse embryos. A detailed description of lens development stages helps better understand the timeline of the events involved in early lens morphogenesis. We then point to some key questions that are still open.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 4-5-6","pages":"235-244"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200162iy","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38382565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Bisphenol A alters differentiation of Leydig cells in the rabbit fetal testis.","authors":"Alexis P Ortega-García,&nbsp;Verónica Díaz-Hernández,&nbsp;Pedro Collazo-Saldaña,&nbsp;Horacio Merchant-Larios","doi":"10.1387/ijdb.200185hm","DOIUrl":"https://doi.org/10.1387/ijdb.200185hm","url":null,"abstract":"<p><p>The endocrine disruptor Bisphenol A (BPA) crosses the placental barrier and reaches the fetal organs, including the gonads. In the testis, fetal Leydig cells (FLC) produce testosterone required for the male phenotype and homeostatic cell-cell signaling in the developing testis. Although it is known that BPA affects cell proliferation and differentiation in FLC, results concerning the mechanism involved are contradictory, mainly due to differences among species. Fast developing fetal gonads of rodents lack cortex and medulla, whereas species with more extended gestation periods form these two tissue compartments. The rabbit provides a good subject for studying the disruptive effect of BPA in fetal Leydig and possible postnatal endocrine consequences in adult Leydig cells. Here, we investigated the impact of BPA administered to pregnant rabbits on the FLC population of the developing testes. Using qRT-PCR, we assessed the levels of S<i>F1</i>, <i>CYP11A1</i>, <i>3β-HSD,</i> and androgen receptor genes, and levels of fetal serum testosterone were measured by ELISA. These levels correlated with both the mitotic activity and the ultrastructural differentiation of the FLC by confocal and electron microscopy, respectively. Results indicate that BPA alters the expression levels of essential genes involved in androgen paracrine signaling, modifies the proliferation and differentiation of the FLCs, and alters the levels of serum testosterone after birth. Thus, BPA may change the postnatal levels of serum testosterone due to the impaired FLC population formed by the proliferating stem and non-proliferating cytodifferentiated FLC.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 4-5-6","pages":"403-412"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200185hm","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38477961","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Insights into the mechanism of adult neurogenesis - an interview with Arturo Álvarez-Buylla.","authors":"Diana Escalante-Alcalde,&nbsp;Jesús Chimal-Monroy","doi":"10.1387/ijdb.200297de","DOIUrl":"https://doi.org/10.1387/ijdb.200297de","url":null,"abstract":"<p><p>Neurogenesis is the process by which new neurons are formed from progenitor cells. The adult nervous system was long considered unable to generate new neurons, especially in mammals. It was not until the 1960s that Joseph Altman and Gopal Das, using H³-thymidine autoradiography to trace newly formed cells, that the first suggestions of new neurons added to the olfactory bulb and the dentate gyrus of the rat hippocampus came about. These observations remained controversial for many years as they went against the dogmatic view that the structure of the adult brain precluded processes of neurogenesis. It was not until two decades later that work in songbirds and then in mammals, not only confirmed that new neurons could be produced in the adult brain, but revealed basic processes of how young neurons are produced, how they could migrate long distances and become incorporated into adult brain circuits. Arturo Álvarez-Buylla has made important contributions to the understanding of the mechanism of adult neurogenesis, including the identification of adult neural stem cells. Here we summarize a discussion with him related to the field of adult neurogenesis, the root of his interest in neural development and the ramifications of some of his laboratory findings.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 1-2-3","pages":"153-161"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200297de","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38610193","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Conserved roles of <i>Rax/rx3</i> genes in hypothalamus and pituitary development.","authors":"Flávio S J De Souza,&nbsp;Marysia Placzek","doi":"10.1387/ijdb.200081fd","DOIUrl":"https://doi.org/10.1387/ijdb.200081fd","url":null,"abstract":"<p><p><i>Rax</i> (<i>Rx</i>) genes encode paired-type homeodomain-containing transcription factors present in virtually all metazoan groups. In vertebrates, studies in fish, amphibian, chick and mouse models have revealed that these genes play important roles in the development of structures located at the anterior portion of the central nervous system, in particular the eyes, the hypothalamus and the pituitary gland. In addition, human patients with eye and brain defects carry mutations in the two human <i>Rax</i> paralogues, <i>RAX</i> and <i>RAX2</i>. Here, we review work done in the last years on <i>Rax</i> genes, focusing especially on the function that mouse <i>Rax</i> and its zebrafish homologue, <i>rx3</i>, play in hypothalamic and pituitary development. Work on both of these model organisms indicate that <i>Rax</i> genes are necessary for the patterning, growth and differentiation of the hypothalamus, in particular the ventro-tuberal and dorso-anterior hypothalamus, where they effect their action by controlling expression of the secreted signalling protein, Sonic hedgehog (Shh). In addition, <i>Rax/rx3</i> mutations disturb the development of the pituitary gland, mimicking phenotypes observed in human subjects carrying mutations in the <i>RAX</i> gene. Thus, along with their crucial role in eye morphogenesis, <i>Rax</i> genes play a conserved role in the development of the hypothalamus and adjacent structures in the vertebrate clade.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 4-5-6","pages":"195-205"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200081fd","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38382572","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Identification of the maize Mediator CDK8 module and transposon-mediated mutagenesis of <i>ZmMed12a</i>.","authors":"Ana L Alonso-Nieves,&nbsp;Tania Núñez-Ríos,&nbsp;Julio A Massange-Sánchez,&nbsp;Kevin R Ahern,&nbsp;Daniel Lepe-Soltero,&nbsp;Marcelina García-Aguilar,&nbsp;Thomas P Brutnell,&nbsp;Ruairidh J H Sawers,&nbsp;C Stewart Gillmor","doi":"10.1387/ijdb.200098sg","DOIUrl":"https://doi.org/10.1387/ijdb.200098sg","url":null,"abstract":"<p><p>Mediator is a conserved transcriptional co-activator that links transcription factors bound at enhancer elements to RNA Polymerase II. Mediator-RNA Polymerase II interactions can be sterically hindered by the Cyclin Dependent Kinase 8 (CDK8) module, a submodule of Mediator that acts to repress transcription in response to discrete cellular and environmental cues. The CDK8 module is conserved in all eukaryotes and consists of 4 proteins: CDK8, CYCLIN C (CYCC), MED12, and MED13. In this study, we have characterized the CDK8 module of Mediator in maize using genomic, molecular and functional resources. The maize genome contains single copy genes for <i>Cdk8</i>, <i>CycC</i>, and <i>Med13</i>, and two genes for <i>Med12</i>. Analysis of expression data for the CDK8 module demonstrated that all five genes are broadly expressed in maize tissues, and change their expression in response to phosphate and nitrogen limitation. We performed <i>Dissociation (Ds)</i> insertional mutagenesis, recovering two independent insertions in the <i>ZmMed12a</i> gene, one of which produces a truncated transcript. Our molecular identification of the maize CDK8 module, assays of CDK8 module expression under nutrient limitation, and characterization of transposon insertions in <i>ZmMed12a</i> establish the basis for molecular and functional studies of the role of these important transcriptional regulators in development and nutrient homeostasis in <i>Zea mays</i>.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 4-5-6","pages":"383-394"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38382574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Epigenetic control of cell fate - an interview with Maria-Elena Torres-Padilla.","authors":"Jesús Chimal-Monroy,&nbsp;Diana Escalante-Alcalde","doi":"10.1387/ijdb.200176jc","DOIUrl":"https://doi.org/10.1387/ijdb.200176jc","url":null,"abstract":"<p><p>Maria-Elena Torres-Padilla's research is focused on how cell fate arises from a single-cell embryo, the fertilized egg or zygote. After the initial divisions, cell potency becomes restricted, originating the first cell lineage fates. She studies how epigenetic information controls transitions in cell identity and cellular reprogramming during embryonic development. Currently, she is the founding Director of the Institute of Epigenetics and Stem Cells, Helmholtz Centre, and Professor of Stem Cell Biology at the Ludwigs Maximilians University in Munich. In this interview, Maria-Elena Torres-Padilla talks to us about her beginnings in the biology field in Mexico. She also tells us about how she became interested in the control of genome regulation within the nucleus during the transition from totipotency to pluripotency and how the control of gene regulation and chromatin organization during the early stages of cell fate decision in the one-cell embryo occurs. She considers that science has no borders; visiting Mexico gives her the possibility to discuss her work with colleagues and the new generation of students trained in Mexico.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 1-2-3","pages":"163-169"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1387/ijdb.200176jc","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38477964","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

{"title":"Mitotic timing is differentially controlled by A- and B-type cyclins and by CDC6 associated with a <i>bona fide</i> CDK inhibitor Xic1 in <i>Xenopus laevis</i> cell-free extract.","authors":"Mohammed El Dika,&nbsp;Lisa Wechselberger,&nbsp;Bilal Djeghout,&nbsp;Djamel Eddine Benouareth,&nbsp;Krystyna Jęderka,&nbsp;Sławomir Lewicki,&nbsp;Robert Zdanowski,&nbsp;Claude Prigent,&nbsp;Malgorzata Kloc,&nbsp;Jacek Z Kubiak","doi":"10.1387/ijdb.200313jk","DOIUrl":"https://doi.org/10.1387/ijdb.200313jk","url":null,"abstract":"<p><p>The timing of the M-phase is precisely controlled by a CDC6-dependent mechanism inhibiting the mitotic histone H1 kinase. Here, we describe the differential regulation of the dynamics of this mitotic kinase activity by exogenous cyclin A or cyclin B in the <i>Xenopus laevis</i> cycling extracts. We show that the experimental increase in cyclin A modifies only the level of histone H1 kinase activity, while the cyclin B increase modifies two parameters: histone H1 kinase activity and the timing of its full activation, which is accelerated. On the other hand, the cyclin A depletion significantly delays full activation of histone H1 kinase. However, when CDC6 is added to such an extract, it inhibits cyclin B-associated histone H1 kinase, but does not modify the mitotic timing in the absence of cyclin A. Further, we show via p9 co-precipitation with Cyclin-Dependent Kinases (CDKs), that both CDC6 and the <i>bona fide</i> CDK1 inhibitor Xic1 associate with the mitotic CDKs. Finally, we show that the Xic1 temporarily separates from the mitotic CDKs complexes during the peak of histone H1 kinase activity. These data show the differential coordination of the M-phase progression by cyclin A- and cyclin B-dependent CDKs, confirm the critical role of the CDC6-dependent histone H1 kinase inhibition in this process, and show that CDC6 acts differentially through the cyclin B- and cyclin A-associated CDKs. This CDC6- and cyclins-dependent mechanism likely depends on the precisely regulated association of Xic1 with the mitotic CDKs complexes. We postulate that: i. the dissociation of Xic1 from the CDKs complexes allows the maximal activation of CDK1 during the M-phase, ii. the switch between cyclin A- and cyclin B-CDK inhibition upon M-phase initiation may be responsible for the diauxic growth of mitotic histone H1 kinase activity.</p>","PeriodicalId":50329,"journal":{"name":"International Journal of Developmental Biology","volume":"65 7-8-9","pages":"487-496"},"PeriodicalIF":0.7,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39437353","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}