Mitochondrial Dna最新文献_第7页

Complete sequence and characterization of mitochondrial genome in great snakehead, Channa marulius (Hamilton, 1822). Channa marulius大蛇头线粒体基因组的完整序列和特征(Hamilton, 1822)。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-09-19 DOI: 10.3109/19401736.2013.834429

Rajeev K Singh, Vindhya Mohindra, Abhinav Pathak, Kuldeep K Lal, J K Jena

引用次数: 5

Complete mitochondrial genome of the Ye's spiny-vented frog Yerana yei (Anura: Dicroglossidae). 叶氏刺孔蛙叶氏刺孔蛙线粒体全基因组(无尾目:双翅蛙科)。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2014-06-24 DOI: 10.3109/19401736.2014.926542

Zhuo Chen, Xiaofei Zhai, Yanjun Zhu, Xiaohong Chen

引用次数: 10

Complete mitochondrial genome of the Olympia oyster Ostrea lurida (Bivalvia, Ostreidae). 奥林匹亚牡蛎Ostrea lurida(双壳目，牡蛎科)线粒体全基因组的研究。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-09-19 DOI: 10.3109/19401736.2013.834428

Shu Xiao, Xiangyun Wu, Lu Li, Ziniu Yu

{"title":"Complete mitochondrial genome of the Olympia oyster Ostrea lurida (Bivalvia, Ostreidae).","authors":"Shu Xiao, Xiangyun Wu, Lu Li, Ziniu Yu","doi":"10.3109/19401736.2013.834428","DOIUrl":"https://doi.org/10.3109/19401736.2013.834428","url":null,"abstract":"The complete mitochondrial (mt) genome of the Olympia oyster Ostrea lurida (16,344 bp), an economically important bivalve, was newly sequenced and annotated. Ostrea lurida is the largest reported Ostrea oyster mt genomes to date and has a comparatively highest overall A + T content (65%) among the available genomes of marine oysters. High levels of variability of nad2 and nad6 genes and that of major non-coding region (MNR) indicate their potential value as useful molecular markers for population and conservation genetic studies in the future. Phylogenetic analyses based on concatenated nucleotide sequences from all 13 PCGs and 2 rRNA genes show that the European flat oyster Ostrea edulis is sister to the Asian slipper oyster Ostrea denselamellosa, while O. lurida is put at the most basal position of the clade, and indicate that Ostrea are closer to Saccostrea than Crassostrea, although gene arrangement shows a closer relationship between Ostrea and Crassostrea. The observations of the evolutionary pattern of start codon usage among the three congeneric oysters indicate that variation in start codon usage is species-correlated rather than gene-correlated, and to some extent, bears useful phylogenetic information. ","PeriodicalId":49805,"journal":{"name":"Mitochondrial Dna","volume":"26 3","pages":"471-2"},"PeriodicalIF":0.0,"publicationDate":"2015-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3109/19401736.2013.834428","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"31742207","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 9

The complete mitochondrial genome of the shortfin mako, Isurus oxyrinchus (Chondrichthyes, Lamnidae). 短鳍鲭鱼的线粒体全基因组。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-09-19 DOI: 10.3109/19401736.2013.834430

Chia-Hao Chang, Kwang-Tsao Shao, Yeong-Shin Lin, An-Yi Tsai, Pin-Xuan Su, Hsuan-Ching Ho

引用次数: 13

Genetic variation among four bred populations of two tilapia strains, based on mitochondrial D-loop sequences. 基于线粒体d -环序列的两个罗非鱼品系四个繁殖群体的遗传变异。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2014-01-07 DOI: 10.3109/19401736.2013.855735

Zhiying Zou, Dayu Li, Jinglin Zhu, Jue Han, Wei Xiao, Hong Yang

{"title":"Genetic variation among four bred populations of two tilapia strains, based on mitochondrial D-loop sequences.","authors":"Zhiying Zou, Dayu Li, Jinglin Zhu, Jue Han, Wei Xiao, Hong Yang","doi":"10.3109/19401736.2013.855735","DOIUrl":"https://doi.org/10.3109/19401736.2013.855735","url":null,"abstract":"The hybrid between Nile tilapia (Oreochromis niloticus,♀) and blue tilapia (O. aureus,♂) is an important strain in Chinese aquaculture industry. Two populations named AF (O. aureus, 29 samples) and NF (O. niloticus, 22 samples) were gathered from Freshwater Fisheries Research Center (FFRC). The other two named AG (O. aureus, 29 samples) and NG (O. niloticus, 28 samples) from Guangxi Fisheries Research Institute (GFRI). GFRI introduced AG and NG from AF and NF. The mitochondrial DNA D-loop was sequenced to assess the genetic diversity among four populations. A 580 bp fragment was sequenced. The 93 variable sites defined 39 haplotypes and three were shared. As a result, the genetic diversity of O. aureus AF and AG was much lower (H=0.497-0.532, K=0.69-0.714, π=0.0012-0.00124) than that of O. niloticus (H=0.849-0.866, K=24.286-24.807, π=0.04246-0.04337). Furthermore, the indices (H, K, π and D) was a slight increase between AF and AG, so did NF and NG. These results indicated that as the male parent, the AF and AG population was purebred and sustainable. And as the female parent, NF and NG had high genetic diversity. The conclusions might give reference to keep the germplasm diversity of tilapia and other introduced fishes.","PeriodicalId":49805,"journal":{"name":"Mitochondrial Dna","volume":"26 3","pages":"426-30"},"PeriodicalIF":0.0,"publicationDate":"2015-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3109/19401736.2013.855735","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"32006049","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 3

Complete mitochondrial genome of the sixbar grouper Epinephelus sexfasciatus (Perciformes: Epinephelidae). 六巴石斑鱼(石斑鱼目:石斑鱼科)线粒体全基因组的研究。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-09-11 DOI: 10.3109/19401736.2013.823175

Fei-Yan Du, Le Ye, Xue-Hui Wang

引用次数: 3

Molecular detection of adulteration in chicken products based on mitochondrial 12S rRNA gene. 基于线粒体12S rRNA基因的鸡肉产品掺假分子检测。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-10-09 DOI: 10.3109/19401736.2013.840593

Osama H A Abuzinadah, Haitham Ahmed Yacoub, Hassan M El Ashmaoui, Hassan A I Ramadan

{"title":"Molecular detection of adulteration in chicken products based on mitochondrial 12S rRNA gene.","authors":"Osama H A Abuzinadah, Haitham Ahmed Yacoub, Hassan M El Ashmaoui, Hassan A I Ramadan","doi":"10.3109/19401736.2013.840593","DOIUrl":"https://doi.org/10.3109/19401736.2013.840593","url":null,"abstract":"The aim of this study is to detect the fraudulent in chicken products constitutes in order to protect consumers in Saudi Arabia from illegal substitutions. Two different approaches were used in this study, direct sequencing of specific fragments of amplified mitochondrial 12S rRNA gene in addition to species-specific PCR primers for confirmation of the obtained Blast search results. The results showed that all processed chicken products were identified as chicken (Gallus gallus) by 90-98% homology depending on obtained sequence quality. Samples labeled with chicken luncheon (samples tested in this study) were identified as turkey meat (Meleagris gallopavo) by 98% homology, suggesting adulteration with inedible parts of turkey in chicken luncheon ingredients. The results showed also that not only chicken luncheon was mixed with inedible parts of turkey but also all chicken products tested in this study (chicken balls, chicken burger, chicken sausage and chicken mined meat) contained this turkey meat. Applying methods used in this study could be useful for accurate and rapid identification of commercial processed meat. ","PeriodicalId":49805,"journal":{"name":"Mitochondrial Dna","volume":"26 3","pages":"337-40"},"PeriodicalIF":0.0,"publicationDate":"2015-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3109/19401736.2013.840593","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"31788001","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 10

Mitochondrial DNA polymorphism in genes encoding ND1, COI and CYTB in canine malignant cancers. 犬恶性肿瘤ND1、COI和CYTB基因的线粒体DNA多态性研究

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-10-09 DOI: 10.3109/19401736.2013.840594

Brygida Slaska, Ludmila Grzybowska-Szatkowska, Sylwia Nisztuk, Magdalena Surdyka, Dorota Rozanska

{"title":"Mitochondrial DNA polymorphism in genes encoding ND1, COI and CYTB in canine malignant cancers.","authors":"Brygida Slaska, Ludmila Grzybowska-Szatkowska, Sylwia Nisztuk, Magdalena Surdyka, Dorota Rozanska","doi":"10.3109/19401736.2013.840594","DOIUrl":"https://doi.org/10.3109/19401736.2013.840594","url":null,"abstract":"The aim of the study was to identify DNA changes in mitochondrial gene fragments: NADH dehydrogenase subunit 1 (ND1), cytochrome c oxidase subunit I (COI) and cytochrome b (CYTB) in tumor tissue, normal tissue and blood, and to define their association with the tumor type in dogs. Molecular analysis included 144 tests in total. A functional effect of the non-synonymous protein coding SNP was predicted. The presence of polymorphisms in all tested gene fragments in individual tissues of dogs was observed. Heteroplasmic changes were found in ND1 and CYTB in epithelioma glandulae sebacei and in CYTB in lymphoma centroblasticum. The results of in silico analysis show the impact of these alleles (COI: 507, ND1: 450, 216, CYTB: 748) on the functioning of proteins and thus their potential role in carcinogenesis. The possible harmful effects of changes in polypeptides in positions T193N, V98M, V118M and H196P were evaluated. It seems that polymorphisms occurring in cells can have a negative impact on functioning of proteins. This promotes disorders of the energy level in cells. ","PeriodicalId":49805,"journal":{"name":"Mitochondrial Dna","volume":"26 3","pages":"452-8"},"PeriodicalIF":0.0,"publicationDate":"2015-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3109/19401736.2013.840594","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"31788002","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 17

The complete mitochondrial genome of Java warty pig (Sus verrucosus). 爪哇疣猪(Sus verrucosus)线粒体全基因组。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2014-01-17 DOI: 10.3109/19401736.2013.873932

Jie Fan, Chun-Hong Li, Wei Shi

引用次数: 3

Complete mitochondrial genome of the serotine bat (Eptesicus serotinus) in Korea. 韩国大棕蝠(Eptesicus serotinus)的全线粒体基因组。

Mitochondrial Dna Pub Date : 2015-06-01 Epub Date: 2013-07-31 DOI: 10.3109/19401736.2013.819503

Taek Woo Nam, Kwang Bae Yoon, Jae Youl Cho, Yung Chul Park

引用次数: 7