Menghao Wang , Xinru Ma , Mengyi Yang , Tengfei Wang , Zhuang Xing , Yanyan Liu , Jingli Yan , Jiamei Li , Yanan Cao
{"title":"Comparative chloroplast genome and species discrimination analyses in Aralia section Aralia (Araliaceae)","authors":"Menghao Wang , Xinru Ma , Mengyi Yang , Tengfei Wang , Zhuang Xing , Yanyan Liu , Jingli Yan , Jiamei Li , Yanan Cao","doi":"10.1016/j.japb.2024.04.011","DOIUrl":"10.1016/j.japb.2024.04.011","url":null,"abstract":"<div><div><em>Aralia</em> section <em>Aralia</em> is a subset of Araliaceae; it constitutes a small lineage that has been utilized in East Asian traditional medicines for centuries. Identifying species within this section can be challenging due to the complex interspecific morphological variations and the prevalence of hybridization. Accurate species identification is crucial for the application of these medicinal plants. In this study, we evaluated the effectiveness of 11 distinct barcode systems for distinguishing species of <em>Aralia</em> sect. <em>Aralia</em>. Comparative analyses of the chloroplast genomes suggested that the plastome length, gene content and order, as well as the expansion/contraction of the inverted repeat regions, are highly conserved. Species discrimination analysis revealed that complete plastomes and their partitioned data sets possessed considerably high discriminatory power (90.91%), which was equivalent to that of standard barcodes. In contrast, nuclear ribosomal DNA sequences demonstrated a marked improvement (90.91%) over nuclear ribosomal internal transcribed spacer (72.73%) in species discrimination. Evidently, nuclear markers did not perform better than plastid markers. However, a combination of barcode from both nuclear and chloroplast genomes can accurately identify all species for <em>Aralia</em> sect. <em>Aralia</em>. We therefore call for developing multilocus markers from different genomes with different inheritance for species discrimination in plant groups.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"18 1","pages":"Pages 21-31"},"PeriodicalIF":0.6,"publicationDate":"2024-06-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143453623","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Taxonomy of the family Strongylophthalmyiidae (Diptera: Nerioidea) in Korea","authors":"Junyeong Woo , Sang Jae Suh","doi":"10.1016/j.japb.2024.04.013","DOIUrl":"10.1016/j.japb.2024.04.013","url":null,"abstract":"<div><div>The family Strongylophthalmyiidae is a poorly known taxon in Korea, and only two species, <em>Strongylophthalmyia ustulata</em> Zetterstedt, 1847, and <em>Strongylophthalmyia raricornis</em> Shatalkin, 1981 have been recorded until now. In the present study, the Korean Strongylophthalmyiidae was taxonomically reviewed, and five species were treated. Among them, three species, <em>Strongylophthalmyia crinita</em> Hennig, 1940; <em>Strongylophthalmyia vikhrevi</em> Galinskaya & Shatalkin, 2018; and <em>S. tangwangana</em> Zhou, Evenhuis & Yang, 2023, were first recorded in Korea.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"18 1","pages":"Pages 39-46"},"PeriodicalIF":0.6,"publicationDate":"2024-06-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143453625","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
V.S. Aashiq Poon , Karthik M. Reddy , Santhosh Naik , S.S. Anooj , Pathour R. Shashank
{"title":"Discovery of Pseudancylis Horak, 2006 with description of new species and documenting two additional species records (Lepidoptera: Tortricidae) from India","authors":"V.S. Aashiq Poon , Karthik M. Reddy , Santhosh Naik , S.S. Anooj , Pathour R. Shashank","doi":"10.1016/j.japb.2024.05.002","DOIUrl":"10.1016/j.japb.2024.05.002","url":null,"abstract":"<div><div>Genus <em>Pseudancylis</em> Horak, 2006 is recorded for the first time from India with the description of new species <em>Pseudancylis kodaguensis</em> Shashank <strong>sp. nov</strong>., and an annotated checklist of all species under the genus is provided. Additionally, two <em>Enarmoniini</em> species, namely <em>Taiwancylis cladodium</em> Razowski, 2000 and <em>Anathamna megalozona</em> Meyrick, 1916 are recorded for the first time from India with descriptions and photographic illustrations.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"18 1","pages":"Pages 14-20"},"PeriodicalIF":0.6,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143453622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Puji Lestari , Yuyun Fitriana , Radix Suharjo , I Gede Swibawa , Setyo Dwi Utomo , Eko Andrianto
{"title":"New parasitoids of Spodoptera frugiperda in Lampung Province, Indonesia","authors":"Puji Lestari , Yuyun Fitriana , Radix Suharjo , I Gede Swibawa , Setyo Dwi Utomo , Eko Andrianto","doi":"10.1016/j.japb.2024.02.005","DOIUrl":"10.1016/j.japb.2024.02.005","url":null,"abstract":"<div><div>Lampung Province is one of the largest maize producers in Indonesia. The invasion of <em>Spodoptera frugiperda</em> into Indonesia led to damage in maize, thereby impacting production. In the invaded area, native natural enemies also played a role in controlling the population of <em>S. frugiperda.</em> Therefore, the exploration and identification of parasitoids associated with <em>S. frugiperda</em> were necessary to determine potential control strategies. Four species of parasitoids were discovered emerging from <em>S. frugiperda</em> larvae collected from four maize production areas in Lampung Province, Indonesia, i.e. Lampung Timur, Pesawaran, Pringsewu, and Lampung Selatan. The parasitation rate ranges from 3.17 to 4.81%. Morphological observations confirmed that the parasitoids belonged to the genera <em>Senometopia</em> (Diptera: Tachinidae), <em>Eriborus</em> (Hymenoptera: Ichneumonidae), <em>Chelonus</em> (Hymenoptera: Braconidae), and <em>Drino</em> (<em>Palexorista</em>) (Diptera: Tachinidae). Additionally, Cytochrome C Oxidase Subunit I (COI) sequence analysis revealed that the parasitoids were identified as <em>Senometopia illota</em>, Genus nr. <em>Eriborus</em> sp., <em>Chelonus formosanus</em>, and <em>Drino</em> (<em>Pelexorista</em>) sp. <em>Senometopia illota</em> and Genus nr. <em>Eriborus</em> sp. are newly recorded as parasitoids of <em>S. frugiperda</em>. This finding will provide valuable information concerning the global diversity and distribution of parasitoids, including Indonesia, as well as a basis for determining appropriate control strategies for <em>S. frugiperda</em>.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"17 4","pages":"Pages 631-643"},"PeriodicalIF":0.6,"publicationDate":"2024-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142704335","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Breeding success and mortality rates in Painted Stork (Mycteria leucocephala) at Telineelapuram Bird Protected Area, India","authors":"Hanumanthu Ramamohan , Kotamaraju Kameswara Rao","doi":"10.1016/j.japb.2024.02.004","DOIUrl":"10.1016/j.japb.2024.02.004","url":null,"abstract":"<div><div>Breeding success and mortality rate of birds are dependent on many factors. However, the availability of food resources, breeding and nesting habitats, and protection offered key to hatching and breeding success, also mortality of chicks as well. The present study illustrates breeding success and chick mortality in a large colony of Painted storks (<em>Mycteria leucocephala</em>), over a period of five years from 2008 to 2013 at a pelicanery in Telineelapuram, Andhra Pradesh, India. Overall breeding success during the study period was high but varied substantially over years. The recruitment rate ranged from a low of 29.26% in the period 2010–11 to a maximum of 46.74% over 2012–13 with a mean of 40.92% over five years. The rate of chick mortality was high due to factors such as (cyclones, perching activity, predation and accidents involving chicks falling out of their nests). The average mortality rate of chicks was 18.6%; however, the number of dead young birds observed ranged from 74 to 105 individuals, with a peak observed during the period 2010–11.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"17 4","pages":"Pages 624-630"},"PeriodicalIF":0.6,"publicationDate":"2024-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142704334","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Taxonomic and distributional notes on four recently described Stenaelurillus species from India (Araneae: Salticidae)","authors":"Rishikesh Tripathi , Gautam Kadam , Sudhikumar Ambalaparambil Vasu","doi":"10.1016/j.japb.2024.04.010","DOIUrl":"10.1016/j.japb.2024.04.010","url":null,"abstract":"<div><div>Notes on four species of the jumping spider genus <em>Stenaelurillus</em> Simon, 1886 from India are presented. <em>Stenaelurillus jagannathae</em> Das, Malik & Vidhel, 2015 syn. nov. is recognized as a junior synonym of <em>S. arambagensis</em> (B. Biswas & K. Biswas, 1992). The mismatched sexes of <em>S. tettu</em> Logunov, 2020 and <em>S. indicus</em> Logunov, 2020 are corrected. The females originally described as <em>S. tettu</em> are recognized as belonging to <em>S. indicus</em> and vice versa. Supplementary morphometric details of <em>S. tettu</em> are provided and new distribution records and illustrations for <em>S. tettu</em> and <em>S. albus</em> Sebastian, Sankaran, Malamel & Joseph, 2015 are presented.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"17 4","pages":"Pages 617-623"},"PeriodicalIF":0.6,"publicationDate":"2024-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142704333","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Three species of Cryptophagidae (Coleoptera: Cucujoidea) new to Korea","authors":"Joong-In Shin, Jong-Seok Park","doi":"10.1016/j.japb.2024.03.009","DOIUrl":"10.1016/j.japb.2024.03.009","url":null,"abstract":"<div><div>The genera <em>Cryptophagus</em> Herbst and <em>Henoticus</em> Thomson (Coleoptera: Cucujoidea: Cryptophagidae) include over 200 and approximately 35 described species worldwide, respectively. In this study, three cryptophagid beetle species, <em>Cryptophagus micaceus</em> Rey, <em>Cryptophagus zonatus</em> Lyubarsky, and <em>Henoticus pilifer</em> Reitter, are recorded for the first time in Korea. As a result, the genera <em>Cryptophagus</em> and <em>Henoticus</em> in Korea increased 13 and two species, respectively. Photographs of habitus, diagnostic characters, and a distribution map for the three species are provided.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"18 1","pages":"Pages 1-5"},"PeriodicalIF":0.6,"publicationDate":"2024-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143453620","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A new species and five new records of Erebidae (Lepidoptera) from India","authors":"Navneet Singh, Angshuman Raha, Jalil Ahmad, Suresh Kr. Shah, Purnendu Mishra, Rahul Joshi","doi":"10.1016/j.japb.2024.04.006","DOIUrl":"10.1016/j.japb.2024.04.006","url":null,"abstract":"<div><p>In the present paper, we examined Erebidae specimens collected from different parts of India, and describe a new species in Arctiinae, <em>Miltochrista terrarega</em> <strong>sp. nov.</strong> and report five species new to the Indian fauna: <em>Ericeia sobria</em> Walker, [1858] in Erebinae; <em>Euproctis cryptosticta</em> Collenette, 1934, <em>Artaxa kanshireia</em> (Wileman, 1910), <em>Nygmia ganesa</em> Kishida, 2020 and <em>N. hanuman</em> Kishida, 2020 in Lymantriinae. Genitalia of <em>B. calopasa</em> from India is also provided. We studied, for the first time, the females of <em>N. ganesa</em> and <em>N. hanuman</em>, and the female genitalia of <em>A. kanshireia</em> and <em>E. cryptosticta</em>. The diagnoses of all the seven species along with their habitus and genitalia illustrations are provided along with the distributions.</p></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"17 3","pages":"Pages 562-572"},"PeriodicalIF":0.6,"publicationDate":"2024-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2287884X24000657/pdfft?md5=e38ef7324d4dd8d74a74daca6357e141&pid=1-s2.0-S2287884X24000657-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142039822","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Naveed Akhtar , Hafiz Muhammad Tahir , Azizullah , Aamir Ali , Muhammad Mohsin Ahsan , Zain Ul Abdin
{"title":"Assessment of biodiversity and seasonal dynamics of spiders in maize crops of Punjab, Pakistan","authors":"Naveed Akhtar , Hafiz Muhammad Tahir , Azizullah , Aamir Ali , Muhammad Mohsin Ahsan , Zain Ul Abdin","doi":"10.1016/j.japb.2024.04.004","DOIUrl":"10.1016/j.japb.2024.04.004","url":null,"abstract":"<div><p>Spiders contribute significantly to natural pest control in agriculture. Here, we investigated the biodiversity, population dynamics and predatory activities of spiders in the maize-growing districts (Kasur and Lahore) of Punjab, Pakistan during 2018–2019. Various collecting methods including pitfall and yellow pan traps, manual hand-picking, beat sheet, and sweep nets were used to collect spiders on a biweekly basis. The collected 12,894 individuals represented 45 different species, 27 genera, and 13 families. The major families recorded were Araneidae (32.92%), Lycosidae (20.43%) and Salticidae (11.12%) comprising >64% of the overall abundance. <em>Neoscona theisi</em> (Araneidae) was found to be most dominant species (11.61%). Moreover, the species <em>Macracantha hasselti</em> (Araneidae) and <em>Atypena formosana</em> are reported for the first time from Pakistan. Besides, the estimated species diversity from both districts was 97%. The Margalef's index was highest in Kasur (D = 5.08) and lowest in Lahore (D = 4.95). The values of the Shannon-Wiener and species evenness indices were similar in Kasur and Lahore suggesting similar diversity levels and an even distribution. Spider abundance was highest in April and lowest in June and July. These findings will help to develop effective Integrated Pest Management strategies in maize growing areas across the world.</p></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"17 3","pages":"Pages 541-549"},"PeriodicalIF":0.6,"publicationDate":"2024-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2287884X2400061X/pdfft?md5=3df83aeee4a0317e64f5cfcc9ff7f57c&pid=1-s2.0-S2287884X2400061X-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142039820","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yuan Wang, Deng-Feng Xie, Bo-Ni Song, Lian Chen, Yu-Lin Xiao, Xing-Jin He
{"title":"Morphological characteristics and systematic position of Allium guanxianense, an endemic species from Sichuan, China","authors":"Yuan Wang, Deng-Feng Xie, Bo-Ni Song, Lian Chen, Yu-Lin Xiao, Xing-Jin He","doi":"10.1016/j.japb.2024.04.007","DOIUrl":"10.1016/j.japb.2024.04.007","url":null,"abstract":"<div><div>The research examined the chloroplast genome structure and evolutionary relationships of <em>Allium guanxianense</em>. The cp genome spans 152,480 bp and comprises a large single copy region (82,305 bp, 53.98% length ratio), a small single copy region (18,353 bp, 12.04%), and two inverted repeat sequences (25,911 bp, 16.99%). A total of 132 genes were identified within the cp genome of <em>A. guanxianense</em>, including 86 protein-coding genes (PCGs), 38 tRNAs, and 8 rRNAs. Its cp genome structure is basically consistent with other species of the sect. <em>Bromatorrhiza</em>, with the only difference being the distributions of <em>ndhF</em> and <em>rpl22</em> at the IR region. The codon usage bias analysis for PCGs revealed that mutation pressure drives the preference for codon usage in <em>Allium</em> species. Phylogenetic analysis of 35 <em>Allium</em> species showed that the genus can be divided into three major lineages, with <em>A. guanxianense</em> positioned at the top of the sect. <em>Bromatorrhiza</em> in first lineage, forming a well-supported sister clade with <em>A. omeiense</em>. Our study presents, for the first time, the morphological characteristics and chloroplast genome features of <em>A. guanxianense</em>, and analyzes its relationship with closely related species. This is of significant importance for the classification, phylogeny, and conservation of this narrowly distributed endemic species.</div></div>","PeriodicalId":37957,"journal":{"name":"Journal of Asia-Pacific Biodiversity","volume":"18 1","pages":"Pages 6-13"},"PeriodicalIF":0.6,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143453621","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}