Ecological Genetics and Genomics最新文献_第7页

Genetic characterization of white onion genotypes (Allium cepa L.) using ISSR markers 利用 ISSR 标记鉴定白葱基因型（Allium cepa L.）

Ecological Genetics and Genomics Pub Date : 2024-08-20 DOI: 10.1016/j.egg.2024.100287

Amal Brahimi , Hassan Hajjaj , Hamid Mazouz

{"title":"Genetic characterization of white onion genotypes (Allium cepa L.) using ISSR markers","authors":"Amal Brahimi , Hassan Hajjaj , Hamid Mazouz","doi":"10.1016/j.egg.2024.100287","DOIUrl":"10.1016/j.egg.2024.100287","url":null,"abstract":"<div>Understanding the genetic characteristics is crucial for preserving and developing Moroccan's white onion genotypes, with increased yield and quality as well as improved tolerance to biotic and abiotic stresses. In the present paper, inter simple sequence repeat (ISSR) markers were used to assess the genetic diversity and characteristics of white onion genotypes (Allium cepa L.) of Morocco. Based on the ISSR markers bands, 28 white onion genotypes were divided into four distinguished subgroups, with a genetic similarity value of 0.46 based on Jaccard index. Molecular markers analysis revealed that all ISSR markers were 100 % polymorphic with the white onions genotypes. Concerning markers performance, polymorphic information content (PIC) ranges from 0.051 to 0.39 with a mean of 0.301; however, the effective multiplex ratio (EMR) and marker index (MI) vary between 3–17 and 0.35–5.04, respectively. Based on resolving power (RP), it appears that the marker UBC825 has an efficient discriminatory power with an RP = 15.67. In contrast, the lowest RP value was detected with the marker UBC815 (RP = 1.58). Based on their high performance, markers UBC825, UBC835, UBC826, UBC840, and UBC811 ISSR seem to be specific and efficient for the identification of Moroccan white onion genotypes. Thus, given the genetic diversity shown by ISSR markers, the abundant resources of white onion genotypes in Morocco could be exploited in more valuable ways.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"33 ","pages":"Article 100287"},"PeriodicalIF":0.0,"publicationDate":"2024-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142040840","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Molecular evidence of novel Begomoviruses and associated Betasatellite complexes linked to Papaya Leaf Curl Disease in Indian Provinces 印度各省与木瓜卷叶病有关的新型 Begomoviruses 和相关 Betasatellite 复合物的分子证据

Ecological Genetics and Genomics Pub Date : 2024-08-19 DOI: 10.1016/j.egg.2024.100286

Priyanka , Priyanka Varun , Yusuf Akhter, Sangeeta Saxena

{"title":"Molecular evidence of novel Begomoviruses and associated Betasatellite complexes linked to Papaya Leaf Curl Disease in Indian Provinces","authors":"Priyanka , Priyanka Varun , Yusuf Akhter, Sangeeta Saxena","doi":"10.1016/j.egg.2024.100286","DOIUrl":"10.1016/j.egg.2024.100286","url":null,"abstract":"<div>Papaya leaf curl disease (PLCD) is caused by distinct begomoviruses affecting papaya globally. This study aims to identify and dissect the genetic complexities of begomoviruses-betasatellites associated with PLCD. Surveys in various Indian provinces to collect symptomatic papaya leaf samples. Molecular characterization of 15 DNA-A positives isolates revealed that PSB 8 and PSB 14 from Lucknow shared 89.69 % and 87.25 % nucleotide sequence identity with other reported begomoviruses and 85.36 % with each other. Based on ICTV's species demarcation threshold, these isolates are proposed as novel begomoviruses, named papaya leaf curl Lucknow virus-1 (PaLCLV-1) and papaya leaf curl Lucknow virus-2 (PaLCLV-2). This study also reports a novel strain (PSB 63) of duranta leaf curl virus (DLCV) on papaya, with a 93.48 % sequence identity with known DLCV. The samples did not amplify for DNA-B but did for betasatellites. Nine of the 15 DNA-A positive samples were associated with betasatellites, revealing a novel betasatellite (PSBB 34) from Gujarat, sharing 88.46 % similarity with ludwigia leaf distortion betasatellite (LuLDB), named papaya leaf curl Lucknow betasatellite (PaLCLB). Another new strain, tomato leaf curl betasatellite (ToLCLB), shared 91.96 % identity with other betasatellites. These begomoviruses are monopartite and likely originated in the Old World. This study is the first to show an association between LuLDB and PaLCV (PSB 34). Recombination analysis revealed that major viral genome regions were obtained from previously reported begomoviruses. The study identified eight papaya-infecting begomoviruses and seven associated betasatellites as prominent in the sampled regions.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"33 ","pages":"Article 100286"},"PeriodicalIF":0.0,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142011238","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Bioinformatic characterization and functional evaluation of Ph-Def: A novel marine antimicrobial peptide from Panulirus homarus Ph-Def：一种新型海洋抗菌肽

Ecological Genetics and Genomics Pub Date : 2024-08-14 DOI: 10.1016/j.egg.2024.100285

Anne Maria Thomas, K.L. Dhanya Lenin, Swapna P. Antony

{"title":"Bioinformatic characterization and functional evaluation of Ph-Def: A novel marine antimicrobial peptide from Panulirus homarus","authors":"Anne Maria Thomas, K.L. Dhanya Lenin, Swapna P. Antony","doi":"10.1016/j.egg.2024.100285","DOIUrl":"10.1016/j.egg.2024.100285","url":null,"abstract":"<div>The present study describes the discovery of Ph-Def, the first marine antimicrobial peptide (AMP) isolated from Panulirus homarus, the Indian spiny lobster. Ph-Def is a 65-amino acid β-defensin (including signal peptide) with potential antimicrobial properties. Phylogenetic analysis revealed its close relationship to β-defensins in other Panulirus lobsters and suggested an evolutionary connection with vertebrate β-defensins. In silico analysis identified hot spot areas and a hydrophobic face, supporting its potential as a marine AMP with antimicrobial activity. A predicted bactericidal stretch spanning from Cys53–Tyr64 was notably identified, covering the mature peptide. Ph-Def demonstrated similarity to β-defensins in other lobster species and fish β-defensins, suggesting a shared functional role against microorganisms. Predicted biological processes associated with Ph-Def include metabolic regulation, cellular biosynthesis, transport, cation transmembrane transport, and immune system processes. These findings underscore the potential of Ph-Def as a marine AMP and expand our understanding of immune responses and defense mechanisms in P. homarus.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100285"},"PeriodicalIF":0.0,"publicationDate":"2024-08-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141993098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Genetic polymorphism amongst moth bean (Vigna aconitifolia (Jacq.) Marechal) accessions evaluated using various molecular markers 利用各种分子标记评估蛾豆（Vigna aconitifolia (Jacq.) Marechal）品种之间的遗传多态性

Ecological Genetics and Genomics Pub Date : 2024-08-09 DOI: 10.1016/j.egg.2024.100284

Akanksha Khare , Neha Gupta , Nidhi Srivastava , Sameer Suresh Bhagyawant

引用次数: 0

Genetic structure and gene flow among populations of willow (Salix species) 柳树种群间的遗传结构和基因流动

Ecological Genetics and Genomics Pub Date : 2024-07-31 DOI: 10.1016/j.egg.2024.100283

Anchal , Jai Pal Sharma , Tushal , Sapna Thakur , Parul Sharma , Anamika Thakur

{"title":"Genetic structure and gene flow among populations of willow (Salix species)","authors":"Anchal , Jai Pal Sharma , Tushal , Sapna Thakur , Parul Sharma , Anamika Thakur","doi":"10.1016/j.egg.2024.100283","DOIUrl":"10.1016/j.egg.2024.100283","url":null,"abstract":"<div>The newly developed Salix hybrids were assessed for genetic diversity using ISSR (Inter Simple Sequence Repeats) molecular markers. The results revealed 88.08 polymorphism, 0.53 polymorphism information content, 4.70 effective multiplex ratio, 2.54 marker index, and 7.18 resolving power from the amplified primers. Clones of the Salix matsudana (MAT) population recorded a maximum mean number of effective alleles (1.42), Shannon information index (0.38), gene diversity (0.25), and percentage of polymorphic loci (82.24 %). The AMOVA (Analysis of molecular variance) results revealed a moderate genetic divergence with a genetic variation of 88 per cent within populations and 12 per cent among the populations. The highest value of total diversity (0.28) and gene diversity (0.24) was recorded between S. matsudana (MAT) and S. tetrasperma (TETRA) populations, while there was more gene flow between S. matsudana (MAT) and S. tetrasperma (TETRA) populations (5.86). The clustering pattern obtained through STRUCTURE software showed two main gene pools and a mixture of 6–7 gene pools to confirm the hybrids based on ISSR marker data. S. matsudana and S. tetrasperma clones showed the highest gene diversity due to their proximity from their original locations, resulting in the least amount of gene exchange among populations. Molecular characterization using ISSR markers was extremely useful for studying the genetic diversity among the willow hybrids and high genetic variability should be utilized for breeding purposes in the future.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100283"},"PeriodicalIF":0.0,"publicationDate":"2024-07-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141952896","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

A review of the mangrove ecosystem in Indonesia: Biodiversity, conservation, and challenges in sustainable management 印度尼西亚红树林生态系统回顾：生物多样性、保护和可持续管理的挑战

Ecological Genetics and Genomics Pub Date : 2024-07-26 DOI: 10.1016/j.egg.2024.100282

Rizal M. Suhardi , Wira Rahardi , Huie-Chuan Shih , Junaldo A. Mantiquilla , Yi-Hui Wu , Meng-Shin Shiao , Yu-Chung Chiang

{"title":"A review of the mangrove ecosystem in Indonesia: Biodiversity, conservation, and challenges in sustainable management","authors":"Rizal M. Suhardi , Wira Rahardi , Huie-Chuan Shih , Junaldo A. Mantiquilla , Yi-Hui Wu , Meng-Shin Shiao , Yu-Chung Chiang","doi":"10.1016/j.egg.2024.100282","DOIUrl":"10.1016/j.egg.2024.100282","url":null,"abstract":"<div>Mangrove ecosystem in Indonesia, representing almost 1/5 of the world's mangroves, plays a pivotal role in biodiversity conservation, coastal protection, and the provision of ecosystem services. The diverse geographic landscapes of the country contribute to one of the largest mangrove forests in the world. However, the mangrove ecosystem in the country was damaged and reduced greatly in the past decades due to anthropogenic activities. To take a further step in the conservation of the ecosystem, it is important to understand the current status of the population distribution, species diversity, and conservation strategies. This article presents a comprehensive assessment of the status of Indonesia's mangrove ecosystems with a specific focus on biodiversity, ongoing conservation endeavors, and prevailing management practices. The principal objective of this review is to gain an in-depth understanding of the significance of these unique ecosystems and the challenges associated with sustaining their health.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100282"},"PeriodicalIF":0.0,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141853809","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Cross transferability of finger millet SSR markers to little millet (Panicum sumatrense Roth. Ex Roem & Schult.) 手指粟 SSR 标记与小米（Panicum sumatrense Roth. Ex Roem & Schult.）

Ecological Genetics and Genomics Pub Date : 2024-07-22 DOI: 10.1016/j.egg.2024.100281

Komal G. Lakhani , Kirankumar Suthar , Diwakar Singh , Sumankumar Jha , Harshal Patil , Rehana Niyaria

{"title":"Cross transferability of finger millet SSR markers to little millet (Panicum sumatrense Roth. Ex Roem & Schult.)","authors":"Komal G. Lakhani , Kirankumar Suthar , Diwakar Singh , Sumankumar Jha , Harshal Patil , Rehana Niyaria","doi":"10.1016/j.egg.2024.100281","DOIUrl":"10.1016/j.egg.2024.100281","url":null,"abstract":"<div>Little millet is an important cereal known as a “nutra-grain' because of its numerous health benefits. Due to lack of genomic information, the present study analyzed the cross-transferability of finger millet SSR markers to little millet. SSR analysis using genomic DNA with 18 available markers in little millet revealed that 12 SSR markers had unique amplicons with the expected size, indicating 66.66 % cross-transferability. This indicates the conservation of the repetitive motifs AG, CTG, GTT, ACG, CGG, (GA)26, (TC)21, (CA)7N12 (GA)15, and (GA)7AA (GA)19 in both species. Genetic analysis with these transferable twelve SSR markers in 16 little millet genotypes revealed a total of 39 alleles with an average of 3.25 alleles per primer. The highest number of alleles (8) was found at GB-FM -53, while the lowest number of alleles (2) was found at GB-FM -67, GB-FM -87, GB-FM -98 and UGEP-101. Out of the total twelve amplified primers, four primers GB-FM -53, GB-FM -67, GB-FM -70 and UGEP-93 were found to be highly effective and best based on highest SSR primer index value, observed and effective number of alleles, Nei genetic diversity, Shannon information index and polymorphic information content. Finger millet SSR markers distinguished sixteen genotypes of little into two major clusters, where two genotypes, WV-151 and WV-152, were highly diverse. This study establishes the high cross-transferability of finger millet SSR markers to little millet facilitating genomic research and breeding efforts for genetically neglected little millet.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100281"},"PeriodicalIF":0.0,"publicationDate":"2024-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141846788","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

The aromatic crop rosagrass (Cymbopogon martinii (Roxb.) Wats. Var. motia Burk.) its high yielding genotypes, perfumery, and pharmacological potential: A review 芳香作物玫瑰草（Cymbopogon martinii (Roxb.) Wats.Var. motia Burk.）的高产基因型、香料和药理潜力：综述

Ecological Genetics and Genomics Pub Date : 2024-07-09 DOI: 10.1016/j.egg.2024.100280

Ashish Kumar , Nilesh Sharma , A.K. Gupta , C.S. Chanotiya , R.K. Lal

{"title":"The aromatic crop rosagrass (Cymbopogon martinii (Roxb.) Wats. Var. motia Burk.) its high yielding genotypes, perfumery, and pharmacological potential: A review","authors":"Ashish Kumar , Nilesh Sharma , A.K. Gupta , C.S. Chanotiya , R.K. Lal","doi":"10.1016/j.egg.2024.100280","DOIUrl":"https://doi.org/10.1016/j.egg.2024.100280","url":null,"abstract":"<div>Palmarosa, also known as rosagrass, is an important source of essential oils used worldwide in the fragrance, cosmetic, and soap industries. Palmarosa is a multi-harvest, perennial aromatic crop that grows 1.8–2.4 m tall. Steam distillation yields an essential oil with a rose-like perfume. It contains geraniol (65–85 %), geranyl acetate (6–12 %), citral (1–2%), citronellol (6.4 %), linalool (2–4%), and trace amounts of α-pinene, myrcene, terpinolene, borneol, caryophyllene, farnesol, and geranyl butyrate. The oil percentage ranges between 0.4 and 0.7 %, depending on the season or environment, crop stage, and crop management parameters. Different cultivated varieties, including PRC-1, Vaishnavi, Trishna, Tripta, CIMAP-Harsh, OPD-1, OPD-2, RRL (B)-77, IW 31245, IW 3629, and IW 3244, have been developed and made commercially available. Biotechnological strategies, such as metabolic engineering or cell culture techniques, can help improve chemical compounds for commercial products. It can be cultivated in degraded, marginal, and salt-affected soil and produces a greater economic return than traditional crops; yet, however, the plant requires significant fertility and water availability to reach its full potential. Because palmarosa oil gives a lingering rose aroma to mixes, it is useful for flavoring tobacco and soap. It is also a source of very high-quality geraniol. Geraniol is highly valued as both a smell and a building block for complex chemicals, and its manufacturing generates employment opportunities in associated industries.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100280"},"PeriodicalIF":0.0,"publicationDate":"2024-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141607128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Is an invasive species a notorious invader or carbon sequencer? 入侵物种是臭名昭著的入侵者还是碳排序者？

Ecological Genetics and Genomics Pub Date : 2024-07-09 DOI: 10.1016/j.egg.2024.100279

Karlia Meitha , Po-Yi Chen , Chieh Chang , Zi-Ci Lin , Tsai-Wen Hsu , Takashi Gojobori , Tzen-Yuh Chiang

{"title":"Is an invasive species a notorious invader or carbon sequencer?","authors":"Karlia Meitha , Po-Yi Chen , Chieh Chang , Zi-Ci Lin , Tsai-Wen Hsu , Takashi Gojobori , Tzen-Yuh Chiang","doi":"10.1016/j.egg.2024.100279","DOIUrl":"10.1016/j.egg.2024.100279","url":null,"abstract":"<div>Non-native species invading habitats often cause ecosystem damage and biodiversity losses. Elevating temperature and CO2 concentrations promote the invasiveness that is highly associated with the nitrogen fixation rates and traits that foster the adaptation of the non-native species, resulting in invasive plants as a cosmopolitan problem. Nevertheless, recent studies revealed a high carbon sequestration capacity of invasive plants in land and coastal habitats, arousing a question if invasive plants always a notorious invader. Badlands are characterized with poor soil development and nutrition, which restrict the growth of plants and soil microbes. Interestingly, leguminous plant with symbiotic nitrogen-fixation bacteria help them explore habitats with low nutrition. Leucaena with high seed yields and deep roots acts as a pioneer in badland ecosystems, usually forming a dominant vegetation with bamboos. Roots exudates likely attract microbes beneficial to the plant growth. Even so, microbial metabolism and respiration tend to increase the CO2 emission from the soils. Nevertheless, biologists discovered that carbon precipitated by roots is more effective in forming mineral-associated soil organic carbon than leaf and root litter inputs. Soil microbial biomass ultimately transforms into necromass with specific properties, constituting an important source of soil organic matter, which compensates largely the CO2 from microbial metabolism. Furthermore, deep roots of Leucaena likely interact with soil microbes through various biogeochemical processes, promoting soil formation, altering rocks and soil minerals, and providing carbon to deeper layers. From the viewpoint of carbon sequestration, invasive Leucaena can make more significant contribution to the badland ecosystem than native species.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100279"},"PeriodicalIF":0.0,"publicationDate":"2024-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141690079","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Exploring polymorphism's iImpact on lLayer pProduction tTraits: A dDeep dDive into aAssociation sStudies and cCandidate genes in Kadaknath 探索多态性对层状生产特征的影响：深入研究 Kadaknath 的关联研究和候选基因

Ecological Genetics and Genomics Pub Date : 2024-07-03 DOI: 10.1016/j.egg.2024.100278

Manjari Pandey , Sanjeev Kumar , Chandrahas , Subrat Kumar Bhanja , Manish Mehra

{"title":"Exploring polymorphism's iImpact on lLayer pProduction tTraits: A dDeep dDive into aAssociation sStudies and cCandidate genes in Kadaknath","authors":"Manjari Pandey , Sanjeev Kumar , Chandrahas , Subrat Kumar Bhanja , Manish Mehra","doi":"10.1016/j.egg.2024.100278","DOIUrl":"https://doi.org/10.1016/j.egg.2024.100278","url":null,"abstract":"<div>This investigation aimed to study the polymorphism and association of important egg production linked candidate genes and layer performances in Kadaknath. The Genomic DNA samples were obtained from blood of 112 birds that were chosen at random. RestrictionFragment Length Polymorphism (RFLP) patterns of three candidate genes viz., cGH, MTNR1C and VIPR-1 was determined using SacI, MboI and HhaI restriction enzymes, respectively. The alleles were separated on 2 % AGE and their molecular sizes were estimated.Two out of the three genes studied i.e. cGH and MTNR1C showed polymorphism however VIPR-1 revealed monomorphic patterns. The different genotypes obtained were then associated with layer performance traits using least-squares analysis of variance. The cGH/SacI genotype was found to have a substantial impact on egg production up to 40 weeks (EP40) and age at sexual maturity (ASM) via association analysis. The cGH gene's AC genotype was linked to the lowest ASM (192.41 ± 11.84 days) and greatest EP40 (36.72 ± 8.86). The EP40 was also affected significantly by MTNR1C/MboI genotypes and birds with AA genotype attained higher body weight at 20 weeks (BW20) and had the highest EP40 (49.29 ± 6.84). The findings suggest that the markers identified can be used in Marker Assisted Selection primarily to select Kadaknath birds for higher BW20 (p ≤ 0.05) and may be used to select birds for lower ASM and higher EP40 with relatively lower level of significance (p ≤ 0.15). It emphasizes on adapting candidate gene PCR-RFLP genotype based selection for faster genetic improvement in layer economic traits of Kadaknath.</div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"32 ","pages":"Article 100278"},"PeriodicalIF":0.0,"publicationDate":"2024-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141583361","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0