Alessandro Bombini, Fernando García-Avello Bofías, Caterina Bracci, Michele Ginolfi and Chiara Ruberto
{"title":"Datacube segmentation via deep spectral clustering","authors":"Alessandro Bombini, Fernando García-Avello Bofías, Caterina Bracci, Michele Ginolfi and Chiara Ruberto","doi":"10.1088/2632-2153/ad622f","DOIUrl":"https://doi.org/10.1088/2632-2153/ad622f","url":null,"abstract":"Extended vision techniques are ubiquitous in physics. However, the data cubes steaming from such analysis often pose a challenge in their interpretation, due to the intrinsic difficulty in discerning the relevant information from the spectra composing the data cube. Furthermore, the huge dimensionality of data cube spectra poses a complex task in its statistical interpretation; nevertheless, this complexity contains a massive amount of statistical information that can be exploited in an unsupervised manner to outline some essential properties of the case study at hand, e.g. it is possible to obtain an image segmentation via (deep) clustering of data-cube’s spectra, performed in a suitably defined low-dimensional embedding space. To tackle this topic, we explore the possibility of applying unsupervised clustering methods in encoded space, i.e. perform deep clustering on the spectral properties of datacube pixels. A statistical dimensional reduction is performed by an ad hoc trained (variational) AutoEncoder, in charge of mapping spectra into lower dimensional metric spaces, while the clustering process is performed by a (learnable) iterative K-means clustering algorithm. We apply this technique to two different use cases, of different physical origins: a set of macro mapping x-ray fluorescence (MA-XRF) synthetic data on pictorial artworks, and a dataset of simulated astrophysical observations.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"32 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141745395","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Kai-Hendrik Cohrs, Gherardo Varando, Nuno Carvalhais, Markus Reichstein and Gustau Camps-Valls
{"title":"Causal hybrid modeling with double machine learning—applications in carbon flux modeling","authors":"Kai-Hendrik Cohrs, Gherardo Varando, Nuno Carvalhais, Markus Reichstein and Gustau Camps-Valls","doi":"10.1088/2632-2153/ad5a60","DOIUrl":"https://doi.org/10.1088/2632-2153/ad5a60","url":null,"abstract":"Hybrid modeling integrates machine learning with scientific knowledge to enhance interpretability, generalization, and adherence to natural laws. Nevertheless, equifinality and regularization biases pose challenges in hybrid modeling to achieve these purposes. This paper introduces a novel approach to estimating hybrid models via a causal inference framework, specifically employing double machine learning (DML) to estimate causal effects. We showcase its use for the Earth sciences on two problems related to carbon dioxide fluxes. In the Q10 model, we demonstrate that DML-based hybrid modeling is superior in estimating causal parameters over end-to-end deep neural network approaches, proving efficiency, robustness to bias from regularization methods, and circumventing equifinality. Our approach, applied to carbon flux partitioning, exhibits flexibility in accommodating heterogeneous causal effects. The study emphasizes the necessity of explicitly defining causal graphs and relationships, advocating for this as a general best practice. We encourage the continued exploration of causality in hybrid models for more interpretable and trustworthy results in knowledge-guided machine learning.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"18 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141745429","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Johannes Nokkala, Gian Luca Giorgi and Roberta Zambrini
{"title":"Retrieving past quantum features with deep hybrid classical-quantum reservoir computing","authors":"Johannes Nokkala, Gian Luca Giorgi and Roberta Zambrini","doi":"10.1088/2632-2153/ad5f12","DOIUrl":"https://doi.org/10.1088/2632-2153/ad5f12","url":null,"abstract":"Machine learning techniques have achieved impressive results in recent years and the possibility of harnessing the power of quantum physics opens new promising avenues to speed up classical learning methods. Rather than viewing classical and quantum approaches as exclusive alternatives, their integration into hybrid designs has gathered increasing interest, as seen in variational quantum algorithms, quantum circuit learning, and kernel methods. Here we introduce deep hybrid classical-quantum reservoir computing for temporal processing of quantum states where information about, for instance, the entanglement or the purity of past input states can be extracted via a single-step measurement. We find that the hybrid setup cascading two reservoirs not only inherits the strengths of both of its constituents but is even more than just the sum of its parts, outperforming comparable non-hybrid alternatives. The quantum layer is within reach of state-of-the-art multimode quantum optical platforms while the classical layer can be implemented in silico.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"22 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141745428","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Patrick Odagiu, Zhiqiang Que, Javier Duarte, Johannes Haller, Gregor Kasieczka, Artur Lobanov, Vladimir Loncar, Wayne Luk, Jennifer Ngadiuba, Maurizio Pierini, Philipp Rincke, Arpita Seksaria, Sioni Summers, Andre Sznajder, Alexander Tapper and Thea K Årrestad
{"title":"Ultrafast jet classification at the HL-LHC","authors":"Patrick Odagiu, Zhiqiang Que, Javier Duarte, Johannes Haller, Gregor Kasieczka, Artur Lobanov, Vladimir Loncar, Wayne Luk, Jennifer Ngadiuba, Maurizio Pierini, Philipp Rincke, Arpita Seksaria, Sioni Summers, Andre Sznajder, Alexander Tapper and Thea K Årrestad","doi":"10.1088/2632-2153/ad5f10","DOIUrl":"https://doi.org/10.1088/2632-2153/ad5f10","url":null,"abstract":"Three machine learning models are used to perform jet origin classification. These models are optimized for deployment on a field-programmable gate array device. In this context, we demonstrate how latency and resource consumption scale with the input size and choice of algorithm. Moreover, the models proposed here are designed to work on the type of data and under the foreseen conditions at the CERN large hadron collider during its high-luminosity phase. Through quantization-aware training and efficient synthetization for a specific field programmable gate array, we show that ns inference of complex architectures such as Deep Sets and Interaction Networks is feasible at a relatively low computational resource cost.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"50 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141745438","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Gabriele Lo Monaco, Marco Bertini, Salvatore Lorenzo and G Massimo Palma
{"title":"Quantum extreme learning of molecular potential energy surfaces and force fields","authors":"Gabriele Lo Monaco, Marco Bertini, Salvatore Lorenzo and G Massimo Palma","doi":"10.1088/2632-2153/ad6120","DOIUrl":"https://doi.org/10.1088/2632-2153/ad6120","url":null,"abstract":"Quantum machine learning algorithms are expected to play a pivotal role in quantum chemistry simulations in the immediate future. One such key application is the training of a quantum neural network to learn the potential energy surface and force field of molecular systems. We address this task by using the quantum extreme learning machine paradigm. This particular supervised learning routine allows for resource-efficient training, consisting of a simple linear regression performed on a classical computer. We have tested a setup that can be used to study molecules of any dimension and is optimized for immediate use on NISQ devices with a limited number of native gates. We have applied this setup to three case studies: lithium hydride, water, and formamide, carrying out both noiseless simulations and actual implementation on IBM quantum hardware. Compared to other supervised learning routines, the proposed setup requires minimal quantum resources, making it feasible for direct implementation on quantum platforms, while still achieving a high level of predictive accuracy compared to simulations. Our encouraging results pave the way towards the future application to more complex molecules, being the proposed setup scalable.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"19 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141745337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Emanuele Costa, Giuseppe Scriva and Sebastiano Pilati
{"title":"Solving deep-learning density functional theory via variational autoencoders","authors":"Emanuele Costa, Giuseppe Scriva and Sebastiano Pilati","doi":"10.1088/2632-2153/ad611f","DOIUrl":"https://doi.org/10.1088/2632-2153/ad611f","url":null,"abstract":"In recent years, machine learning models, chiefly deep neural networks, have revealed suited to learn accurate energy-density functionals from data. However, problematic instabilities have been shown to occur in the search of ground-state density profiles via energy minimization. Indeed, any small noise can lead astray from realistic profiles, causing the failure of the learned functional and, hence, strong violations of the variational property. In this article, we employ variational autoencoders (VAEs) to build a compressed, flexible, and regular representation of the ground-state density profiles of various quantum models. Performing energy minimization in this compressed space allows us to avoid both numerical instabilities and variational biases due to excessive constraints. Our tests are performed on one-dimensional single-particle models from the literature in the field and, notably, on a three-dimensional disordered potential. In all cases, the ground-state energies are estimated with errors below the chemical accuracy and the density profiles are accurately reproduced without numerical artifacts. Furthermore, we show that it is possible to perform transfer learning, applying pre-trained VAEs to different potentials.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"286 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141745432","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jian-Gang Kong, Ke-Lin Zhao, Jian Li, Qing-Xu Li, Yu Liu, Rui Zhang, Jia-Ji Zhu and Kai Chang
{"title":"Self-supervised representations and node embedding graph neural networks for accurate and multi-scale analysis of materials","authors":"Jian-Gang Kong, Ke-Lin Zhao, Jian Li, Qing-Xu Li, Yu Liu, Rui Zhang, Jia-Ji Zhu and Kai Chang","doi":"10.1088/2632-2153/ad612b","DOIUrl":"https://doi.org/10.1088/2632-2153/ad612b","url":null,"abstract":"Supervised machine learning algorithms, such as graph neural networks (GNN), have successfully predicted material properties. However, the superior performance of GNN usually relies on end-to-end learning on large material datasets, which may lose the physical insight of multi-scale information about materials. And the process of labeling data consumes many resources and inevitably introduces errors, which constrains the accuracy of prediction. We propose to train the GNN model by self-supervised learning on the node and edge information of the crystal graph. Compared with the popular manually constructed material descriptors, the self-supervised atomic representation can reach better prediction performance on material properties. Furthermore, it may provide physical insights by tuning the range information. Applying the self-supervised atomic representation on the magnetic moment datasets, we show how they can extract rules and information from the magnetic materials. To incorporate rich physical information into the GNN model, we develop the node embedding graph neural networks (NEGNN) framework and show significant improvements in the prediction performance. The self-supervised material representation and the NEGNN framework may investigate in-depth information from materials and can be applied to small datasets with increased prediction accuracy.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"64 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141745431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Wojciech G Stark, Cas van der Oord, Ilyes Batatia, Yaolong Zhang, Bin Jiang, Gábor Csányi and Reinhard J Maurer
{"title":"Benchmarking of machine learning interatomic potentials for reactive hydrogen dynamics at metal surfaces","authors":"Wojciech G Stark, Cas van der Oord, Ilyes Batatia, Yaolong Zhang, Bin Jiang, Gábor Csányi and Reinhard J Maurer","doi":"10.1088/2632-2153/ad5f11","DOIUrl":"https://doi.org/10.1088/2632-2153/ad5f11","url":null,"abstract":"Simulations of chemical reaction probabilities in gas surface dynamics require the calculation of ensemble averages over many tens of thousands of reaction events to predict dynamical observables that can be compared to experiments. At the same time, the energy landscapes need to be accurately mapped, as small errors in barriers can lead to large deviations in reaction probabilities. This brings a particularly interesting challenge for machine learning interatomic potentials, which are becoming well-established tools to accelerate molecular dynamics simulations. We compare state-of-the-art machine learning interatomic potentials with a particular focus on their inference performance on CPUs and suitability for high throughput simulation of reactive chemistry at surfaces. The considered models include polarizable atom interaction neural networks (PaiNN), recursively embedded atom neural networks (REANN), the MACE equivariant graph neural network, and atomic cluster expansion potentials (ACE). The models are applied to a dataset on reactive molecular hydrogen scattering on low-index surface facets of copper. All models are assessed for their accuracy, time-to-solution, and ability to simulate reactive sticking probabilities as a function of the rovibrational initial state and kinetic incidence energy of the molecule. REANN and MACE models provide the best balance between accuracy and time-to-solution and can be considered the current state-of-the-art in gas-surface dynamics. PaiNN models require many features for the best accuracy, which causes significant losses in computational efficiency. ACE models provide the fastest time-to-solution, however, models trained on the existing dataset were not able to achieve sufficiently accurate predictions in all cases.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"19 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141720016","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Deep probabilistic direction prediction in 3D with applications to directional dark matter detectors","authors":"Majd Ghrear, Peter Sadowski and Sven E Vahsen","doi":"10.1088/2632-2153/ad5f13","DOIUrl":"https://doi.org/10.1088/2632-2153/ad5f13","url":null,"abstract":"We present the first method to probabilistically predict 3D direction in a deep neural network model. The probabilistic predictions are modeled as a heteroscedastic von Mises-Fisher distribution on the sphere , giving a simple way to quantify aleatoric uncertainty. This approach generalizes the cosine distance loss which is a special case of our loss function when the uncertainty is assumed to be uniform across samples. We develop approximations required to make the likelihood function and gradient calculations stable. The method is applied to the task of predicting the 3D directions of electrons, the most complex signal in a class of experimental particle physics detectors designed to demonstrate the particle nature of dark matter and study solar neutrinos. Using simulated Monte Carlo data, the initial direction of recoiling electrons is inferred from their tortuous trajectories, as captured by the 3D detectors. For keV electrons in a 70% He 30% CO2 gas mixture at STP, the new approach achieves a mean cosine distance of 0.104 (26∘) compared to 0.556 (64∘) achieved by a non-machine learning algorithm. We show that the model is well-calibrated and accuracy can be increased further by removing samples with high predicted uncertainty. This advancement in probabilistic 3D directional learning could increase the sensitivity of directional dark matter detectors.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"24 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141586996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Thang M Pham, Nam Do, Ha T T Pham, Hanh T Bui, Thang T Do and Manh V Hoang
{"title":"CResU-Net: a method for landslide mapping using deep learning","authors":"Thang M Pham, Nam Do, Ha T T Pham, Hanh T Bui, Thang T Do and Manh V Hoang","doi":"10.1088/2632-2153/ad5f17","DOIUrl":"https://doi.org/10.1088/2632-2153/ad5f17","url":null,"abstract":"Landslides, which can occur due to earthquakes and heavy rainfall, pose significant challenges across large areas. To effectively manage these disasters, it is crucial to have fast and reliable automatic detection methods for mapping landslides. In recent years, deep learning methods, particularly convolutional neural and fully convolutional networks, have been successfully applied to various fields, including landslide detection, with remarkable accuracy and high reliability. However, most of these models achieved high detection performance based on high-resolution satellite images. In this research, we introduce a modified Residual U-Net combined with the Convolutional Block Attention Module, a deep learning method, for automatic landslide mapping. The proposed method is trained and assessed using freely available data sets acquired from Sentinel-2 sensors, digital elevation models, and slope data from ALOS PALSAR with a spatial resolution of 10 m. Compared to the original ResU-Net model, the proposed architecture achieved higher accuracy, with the F1-score improving by 9.1% for the landslide class. Additionally, it offers a lower computational cost, with 1.38 giga multiply-accumulate operations per second (GMACS) needed to execute the model compared to 2.68 GMACS in the original model. The source code is available at https://github.com/manhhv87/LandSlideMapping.git.","PeriodicalId":33757,"journal":{"name":"Machine Learning Science and Technology","volume":"235 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2024-07-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141588574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}