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Multiple sclerosis: The role of miRNAs and their implications in cellular pathways 多发性硬化症:mirna的作用及其在细胞通路中的意义
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-04-22 DOI: 10.1016/j.humgen.2026.201562
Doha El-Sayed Ellakwa , Arwa Amer , Aya Ibrahim , Rana Aboeleneen , Al-Hassan Soliman Wadan , Takwa E. Ellakwa
{"title":"Multiple sclerosis: The role of miRNAs and their implications in cellular pathways","authors":"Doha El-Sayed Ellakwa ,&nbsp;Arwa Amer ,&nbsp;Aya Ibrahim ,&nbsp;Rana Aboeleneen ,&nbsp;Al-Hassan Soliman Wadan ,&nbsp;Takwa E. Ellakwa","doi":"10.1016/j.humgen.2026.201562","DOIUrl":"10.1016/j.humgen.2026.201562","url":null,"abstract":"<div><div>Multiple sclerosis [MS] is a chronic autoimmune disorder characterized by inflammatory damage to the central nervous system, leading to progressive myelin degradation and neurological impairment. MicroRNAs [miRNAs] have been identified as key regulators in MS pathogenesis, with their expression being influenced by environmental, genetic, and immunological factors. Specific miRNAs, including miR-155, miR-150, and the miR-15a/16–1 cluster, are linked to dysregulated immune responses and disease progression. Moreover, the stability of miRNAs in bodily fluids positions them as potential non-invasive biomarkers for MS diagnosis. However, despite these advancements, MS remains a complex condition that is challenging to diagnose and treat effectively. The heterogeneity of the disease and the intricate regulatory mechanisms governing miRNA expression present significant barriers to the development of targeted therapies and reliable biomarkers. This review examines the diverse functions of miRNAs in MS, emphasizing their dual role as biomarkers and therapeutic targets. It discusses the distinct miRNA expression profiles identified in the serum and cerebrospinal fluid of MS patients, which may contribute to improved diagnostic precision. Additionally, advancements in miRNA delivery and modulation technologies are explored as promising therapeutic strategies to restore immune balance and reduce neuroinflammation. By harnessing these insights, researchers may refine diagnostic tools and develop targeted treatments, ultimately enhancing clinical outcomes for MS patients. This review highlights the necessity for further investigation into miRNA-based approaches, advocating for continued research to fully realize their potential in advancing MS diagnosis and therapeutic strategies.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201562"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147797983","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The OIP5-AS1/miR-199a-3p/FN1 ceRNA axis modulates extracellular matrix remodelling and invasive signaling in oral squamous cell carcinoma OIP5-AS1/miR-199a-3p/FN1 ceRNA轴调节口腔鳞状细胞癌的细胞外基质重塑和侵袭性信号传导
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-04-30 DOI: 10.1016/j.humgen.2026.201563
K.P. Ameya, P.P. Ashikha Shirin Usman, Durairaj Sekar
{"title":"The OIP5-AS1/miR-199a-3p/FN1 ceRNA axis modulates extracellular matrix remodelling and invasive signaling in oral squamous cell carcinoma","authors":"K.P. Ameya,&nbsp;P.P. Ashikha Shirin Usman,&nbsp;Durairaj Sekar","doi":"10.1016/j.humgen.2026.201563","DOIUrl":"10.1016/j.humgen.2026.201563","url":null,"abstract":"<div><h3>Purpose</h3><div>Oral squamous cell carcinoma (OSCC) remains a highly aggressive malignancy with poor clinical outcomes due to late diagnosis and the lack of robust molecular biomarkers. Emerging evidence suggests that competing endogenous RNA (ceRNA) networks involving non-coding RNAs play critical roles in cancer progression; however, OSCC-specific regulatory axes remain incompletely understood. This study aimed to identify and characterize a novel ceRNA regulatory network involving OIP5-AS1, miR-199a-3p, and FN1, and to elucidate its functional and clinical relevance in OSCC.</div></div><div><h3>Principal results</h3><div>Integrated in silico analysis of TCGA datasets revealed significant downregulation of miR-199a-3p and concurrent upregulation of lncRNA OIP5-AS1 and FN1 in OSCC tissues. Bioinformatic predictions and network analyses supported a ceRNA mechanism whereby OIP5-AS1 acts as a molecular sponge for miR-199a-3p, leading to derepression of FN1. Elevated expression of OIP5-AS1 and FN1, together with reduced miR-199a-3p levels, correlated with advanced tumor stage, enhanced invasive potential, and poor prognosis. Functional enrichment and pathway analyses implicated this axis in extracellular matrix remodelling, oncogenic signaling pathways, and tumor microenvironment modulation. These findings were experimentally validated through quantitative real-time PCR in OSCC clinical tissue samples and in OSCC cell lines with differing invasive capacities.</div></div><div><h3>Major conclusions</h3><div>The present study identifies the OIP5-AS1/miR-199a-3p/FN1 axis as a critical ceRNA-mediated regulatory network driving OSCC progression. Its consistent association with tumor aggressiveness and clinical severity highlights its potential utility as a diagnostic and prognostic biomarker, as well as a promising target for future therapeutic intervention in OSCC.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201563"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147850136","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genomic surveillance with next-generation sequencing in neonatal sepsis: Emerging tools for precision medicine 新生儿败血症的下一代测序基因组监测:精准医学的新兴工具
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-04-16 DOI: 10.1016/j.humgen.2026.201557
Vijay Laxmi, Sheetal Verma, Vimala Venkatesh, Mohit, Jayhind Maury, Ankita Yadav
{"title":"Genomic surveillance with next-generation sequencing in neonatal sepsis: Emerging tools for precision medicine","authors":"Vijay Laxmi,&nbsp;Sheetal Verma,&nbsp;Vimala Venkatesh,&nbsp;Mohit,&nbsp;Jayhind Maury,&nbsp;Ankita Yadav","doi":"10.1016/j.humgen.2026.201557","DOIUrl":"10.1016/j.humgen.2026.201557","url":null,"abstract":"<div><div>Neonatal sepsis remains a leading cause of morbidity and mortality worldwide, particularly in low- and middle-income countries, despite advances in neonatal intensive care. Traditional diagnostic methods for neonatal sepsis, including blood cultures, are limited by suboptimal sensitivity and prolonged turnaround times, which can delay targeted antimicrobial therapy and contribute to extended exposure to broad-spectrum antibiotics. Next-generation sequencing (NGS) is a culture-independent diagnostic approach that may broaden pathogen detection; however, its sensitivity, turnaround time, and established clinical utility in neonatal blood specimens are still being evaluated. This high-throughput technology has the potential to improve diagnostic capabilities in neonatal sepsis by detecting both common and rare organisms. This genomic approach may support precision treatment strategies by identifying antimicrobial resistance genes and informing antibiotic selection based on resistance profiling. Additionally, NGS offers opportunities to explore host-response signatures that may assist in risk stratification. However, these applications remain investigational, and their role in predicting neonatal sepsis risk and clinical outcomes through genomic profiling, including the analysis of gene interactions and antimicrobial resistance (AMR) associated mutations requires further validation. Besides these advantages, some limitations still exist, such as high cost, the need for trained personnel, resource constraints and challenges with accurate clinical interpretations. Regulatory guidelines and clinical integration frameworks are still evolving, and NGS is currently regarded as a complementary rather than routine diagnostic tool, as recommendations for its standardized use in neonatal sepsis remain under development. This article discusses and summarizes clinical evidence and highlights implementation barriers, offering a novel perspective on the upcoming roadmap for NGS integration in neonatal sepsis. It highlights the need for future multi-centric genomic surveillance, standardization of interpretation tools, genomic antimicrobial stewardship may enhance its role in advancing personalized and evidence-based neonatal care.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201557"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147797984","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Role of leucine-rich repeats and immunoglobulin-like domains 1 (LRIG1) and high mobility group AT-hook 2 (HMGA2) mRNA gene expression in the diagnosis and prognosis of colorectal cancer patients 富亮氨酸重复序列和免疫球蛋白样结构域1 (LRIG1)和高迁移率组AT-hook 2 (HMGA2) mRNA基因表达在结直肠癌患者诊断和预后中的作用
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-05-09 DOI: 10.1016/j.humgen.2026.201567
Amaal Alaa El-Dien , Mahmoud El-Bendary , Mustafa Neamatallah , Ahmed El-Eraky , Waleed El Nahas , Noha Mostafa Mahmoud , Abdel-Hady El-gilany , Mohamed Elegezy
{"title":"Role of leucine-rich repeats and immunoglobulin-like domains 1 (LRIG1) and high mobility group AT-hook 2 (HMGA2) mRNA gene expression in the diagnosis and prognosis of colorectal cancer patients","authors":"Amaal Alaa El-Dien ,&nbsp;Mahmoud El-Bendary ,&nbsp;Mustafa Neamatallah ,&nbsp;Ahmed El-Eraky ,&nbsp;Waleed El Nahas ,&nbsp;Noha Mostafa Mahmoud ,&nbsp;Abdel-Hady El-gilany ,&nbsp;Mohamed Elegezy","doi":"10.1016/j.humgen.2026.201567","DOIUrl":"10.1016/j.humgen.2026.201567","url":null,"abstract":"<div><h3>Background</h3><div>The immunoglobulin superfamily domains and high mobility group genes have been reported to contribute to human colorectal cancer pathogenesis (CRC).</div></div><div><h3>Methods</h3><div>The aim of this study was to evaluate the gene expression of leucine-rich repeats and immunoglobulin-like domains 1 (LRIG1) and High mobility group AT-hook 2 (HMGA2) as diagnostic and prognostic markers in cases of colorectal cancer. Forty-five patients pathologically confirmed with colorectal cancer were prospectively analyzed for LRIG1 and HMGA2 gene expression at the tissue level. SYBR Green Real-Time RT-PCR technique was used for gene expression analyses, and β-actin gene was used as a reference gene for data normalization.</div></div><div><h3>Results</h3><div>HMGA2 mRNA gene expression was found to be overexpressed in CRC tissue compared to normal tissue (<em>P</em> &lt; 0.05) with a positive correlation between HMGA2 and poor differentiation, more advanced stage, and lymph node metastasis (<em>p</em> &lt; 0.05) but not with distant metastasis (<em>p</em> &gt; 0.05). The expression of LRIG1 mRNA gene in tumor tissue was low in colorectal tumor tissues (P &lt; 0.05) but showed no correlation with the stage, differentiation, and metastasis of CRC (<em>P</em> &gt; 0.05). There was no correlation between both genes and tumor biomarkers (CA19–9, CEA) or routine laboratory findings (<em>P</em> &gt; 0.5). Overall survival showed no significant association with the genetic expression of both genes (P &gt; 0.05).</div></div><div><h3>Conclusion</h3><div>Although the downregulation of LRIG1 and the upregulation of HMGA2 in colorectal cancer tissue may serve as diagnostic markers to differentiate between malignant and normal colon tissues, their expression levels did not reach statistical significance for prognostic value and, therefore, cannot be considered reliable prognostic indicators in colorectal cancer.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201567"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147951305","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MicroRNAs in melanoma progression and metastasis: From mechanisms to therapy resistance microrna在黑色素瘤进展和转移中的作用:从机制到治疗耐药性
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-05-07 DOI: 10.1016/j.humgen.2026.201566
Doha El-Sayed Ellakwa , Essam Ouda Mohamed , Al-Hassan Soliman Wadan , Nada Elbaz Mahmoud , Seif Eldin M. Elbasiony , Amany gomaa atiaa , Takwa E. Ellakwa
{"title":"MicroRNAs in melanoma progression and metastasis: From mechanisms to therapy resistance","authors":"Doha El-Sayed Ellakwa ,&nbsp;Essam Ouda Mohamed ,&nbsp;Al-Hassan Soliman Wadan ,&nbsp;Nada Elbaz Mahmoud ,&nbsp;Seif Eldin M. Elbasiony ,&nbsp;Amany gomaa atiaa ,&nbsp;Takwa E. Ellakwa","doi":"10.1016/j.humgen.2026.201566","DOIUrl":"10.1016/j.humgen.2026.201566","url":null,"abstract":"<div><div>Melanoma progression to metastasis remains a critical clinical challenge, driven by complex microRNA (miRNA) networks that orchestrate tumor microenvironment remodeling, epithelial-mesenchymal transition (EMT), angiogenesis, immune evasion, and therapy resistance. This review synthesizes current evidence on miRNAs regulating these interconnected processes in melanoma, grouping them by key pathways (MAPK, PI3K/AKT, TGF-β, immune checkpoints) and convergent metastatic phenotypes rather than individual molecules. Through an analysis of human tissue, circulating, and preclinical studies, we distinguish strong clinical evidence (e.g., prognostic tissue signatures, serum biomarkers tracking progression) from emerging preclinical findings, highlighting roles of miR-21, miR-155, miR-214, and miR-200 family members. While miRNAs hold promise as diagnostic/prognostic tools and therapeutic targets, clinical translation faces barriers including delivery challenges and off-target effects, as evidenced by the MRX34 (miR-34a) trial failure. We propose prioritized miRNA panels for clinical validation and strategies integrating them with targeted/immunotherapies to overcome resistance in advanced disease.</div><div>Melanoma progression to metastasis remains a critical clinical challenge, driven by miRNA networks orchestrating tumor microenvironment (TME) remodeling, EMT, angiogenesis, immune evasion, and therapy resistance. This review synthesizes human tissue/circulating evidence, grouping miRNAs by pathways (MAPK, PI3K/AKT, TGF-β, immune checkpoints) and convergent metastatic phenotypes rather than isolated molecules.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201566"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147951304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Artificial intelligence enhanced CRISPR based epigenomic editing: A brighter future in precision medicine 人工智能增强基于CRISPR的表观基因组编辑:精准医学的光明未来
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-05-06 DOI: 10.1016/j.humgen.2026.201565
Himani Dange , Chandrakant Bonde , Smita Bonde , Kalpana Pandya , Devendra Kumar , Jineetkumar Gawad
{"title":"Artificial intelligence enhanced CRISPR based epigenomic editing: A brighter future in precision medicine","authors":"Himani Dange ,&nbsp;Chandrakant Bonde ,&nbsp;Smita Bonde ,&nbsp;Kalpana Pandya ,&nbsp;Devendra Kumar ,&nbsp;Jineetkumar Gawad","doi":"10.1016/j.humgen.2026.201565","DOIUrl":"10.1016/j.humgen.2026.201565","url":null,"abstract":"<div><div>This review discusses the convergence of clustered regularly interspaced short palindromic repeats (CRISPR)-based epigenomic editing and artificial intelligence (AI) and their synergistic potential in gene regulation and disease therapy. CRISPR-based epigenomic editing, focused on deactivated Cas9, allows for targeted epigenetic marker modifications like DNA methylation and histone modifications without changing the DNA sequence. This method has the potential to reveal and cure multifaceted diseases such as cancer and neurological diseases by reversing erroneous gene function. The combination of AI, specifically machine learning and deep learning, improves the accuracy and efficiency of CRISPR-based systems. AI models enhance guide RNA design, forecast off-targeting effects, and incorporate multi-omics data to gain an in-depth understanding of gene regulation. These innovations enable early detection of disease, customized therapies, and prevention by finding epigenetic biomarkers and risk factors. The CRISPR-AI combination also opens doors for real-time treatment response monitoring and adaptive therapies with the potential for dynamic adaptation to patient-specific epigenetic information. Nevertheless, ethical concerns and technical hurdles like data complexity and model generalizability need to be overcome to utilize these opportunities responsibly. The convergence of CRISPR and AI technologies holds transformative promise for precision medicine, from the early detection of disease to personalized interventions.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201565"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147850134","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Concurrence of Prader-Willi syndrome and Fabry disease: First case report and family-based analysis of a unique dual molecular diagnosis 普瑞德-威利综合征和法布里病并发:首次病例报告和基于家庭的独特双分子诊断分析
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-04-30 DOI: 10.1016/j.humgen.2026.201564
Ye-Ting Hu , Yong-Xue Lyu , Yi Gao
{"title":"Concurrence of Prader-Willi syndrome and Fabry disease: First case report and family-based analysis of a unique dual molecular diagnosis","authors":"Ye-Ting Hu ,&nbsp;Yong-Xue Lyu ,&nbsp;Yi Gao","doi":"10.1016/j.humgen.2026.201564","DOIUrl":"10.1016/j.humgen.2026.201564","url":null,"abstract":"<div><h3>Objective</h3><div>This study aimed to investigate the clinical phenotype and familial genetic characteristics of a rare case with concurrent 15q11.2–q13.1 deletion and a GLA gene variant, providing a reference for early diagnosis and family management of such complex genetic disorders.</div></div><div><h3>Methods</h3><div>A retrospective analysis was performed on a female infant who presented at 1 month and 25 days of age with feeding difficulties and hypotonia. Whole-exome sequencing (WES) and methylation-specific multiplex ligation-dependent probe amplification were conducted for genetic validation. Family members were screened for the GLA variant and assessed for α-galactosidase A (α-Gal A) activity.</div></div><div><h3>Results</h3><div>The patient had feeding difficulties, hypotonia, growth delay, and hip dysplasia. WES revealed a 5.48 Mb heterozygous deletion in 15q11.2–q13.1, confirmed by abnormal methylation indicating paternal origin. Concurrently, WES identified a paternally inherited GLA splicing variant (c.640-801G &gt; A), classified as pathogenic by American College of Medical Genetics and Genomics criteria. Aside from typical Prader-Willi syndrome features, the patient had no Fabry disease symptoms. The father had diarrhea, acroparesthesia, hypohidrosis, fatty liver, a renal cyst, and mild left ventricular dysfunction. The grandmother carried the same GLA variant with reduced α-Gal A activity but was asymptomatic. The patient started recombinant human growth hormone at 3 months; at 1-year follow-up, her height and weight were normal, with improved motor and feeding functions.</div></div><div><h3>Conclusions</h3><div>This first reported case of concurrent 15q11.2–q13.1 deletion and a GLA variant highlights the phenotypic impact of multiple genetic variations. Genetic testing facilitates early identification, genetic counseling, and individualized follow-up. The personalized treatment strategy and dynamic risk assessment offer insights for managing similar complex cases.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201564"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147850133","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-exome sequencing identifies a novel variant within the ARSB gene causing mucopolysaccharidosis type VI in an Iranian patient 全外显子组测序鉴定出在伊朗患者中引起粘多糖病VI型的ARSB基因中的新变体
IF 0.7
Human Gene Pub Date : 2026-05-01 Epub Date: 2026-04-22 DOI: 10.1016/j.humgen.2026.201561
Elham Alimoradi , Parham Nejati , Sanaz Bahadori , Fatemeh Molavi , Soudeh Ghafouri-Fard , Reza Alibakhshi
{"title":"Whole-exome sequencing identifies a novel variant within the ARSB gene causing mucopolysaccharidosis type VI in an Iranian patient","authors":"Elham Alimoradi ,&nbsp;Parham Nejati ,&nbsp;Sanaz Bahadori ,&nbsp;Fatemeh Molavi ,&nbsp;Soudeh Ghafouri-Fard ,&nbsp;Reza Alibakhshi","doi":"10.1016/j.humgen.2026.201561","DOIUrl":"10.1016/j.humgen.2026.201561","url":null,"abstract":"<div><h3>Background</h3><div>Mucopolysaccharidosis type VI (MPS VI) is a rare lysosomal storage disorder caused by pathogenic variants in the <em>ARSB</em> gene, encoding the enzyme arylsulfatase B.</div></div><div><h3>Methods</h3><div>We reported the clinical and molecular characterization of a novel homozygous variant in the <em>ARSB</em> gene in an Iranian patient with MPS VI. The proband's DNA underwent whole-exome sequencing (WES). Identified variants were filtered and analyzed using bioinformatics tools and databases. The pathogenic impact of the variant was assessed using <em>in silico</em> prediction tools and protein modeling.</div></div><div><h3>Results</h3><div>The patient had the classic manifestations of MPS VI, including coarse facies, skeletal dysplasia, organomegaly, and elevated urinary glycosaminoglycans. WES identified a novel homozygous missense variant, c.982G &gt; C (p.Gly328Arg), in exon 5 of the <em>ARSB</em> gene (NM_000046.5). <em>In silico</em> analyses, including HOPE, mCSM, SDM, and DUET, unanimously predicted this variant to be destabilizing and deleterious. Additionally, protein modeling indicated a significant structural alteration due to the substitution of a small, non-polar glycine with a larger, positively charged arginine. Taken together, we report a novel variant, c.982G &gt; C (p.Gly328Arg), in the <em>ARSB</em> gene, expanding the mutational spectrum of MPS VI among Iranians. This finding underscores the utility of WES in diagnosing rare metabolic disorders and facilitates accurate genetic counseling for the affected family.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"48 ","pages":"Article 201561"},"PeriodicalIF":0.7,"publicationDate":"2026-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147850132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigation of clinical features, differential gene expression, and immune infiltration in female genital tuberculosis using RNA sequencing and bioinformatics analysis 利用RNA测序和生物信息学分析研究女性生殖器结核的临床特征、差异基因表达和免疫浸润
IF 0.7
Human Gene Pub Date : 2026-02-01 Epub Date: 2026-02-05 DOI: 10.1016/j.humgen.2026.201538
Qi Wang , Yaping Chen , Yanfen Liu , Bei Xie , Huijuan Deng , Fanrong Meng , Nan Wang , Defang Xiong , Yuanjin Chen , Zeyou Wei , Pengyan Dong , Bo Huang , Yu Yang , Xiaomin Lai , Zhihui Liu , Hua Li , Weiyun He
{"title":"Investigation of clinical features, differential gene expression, and immune infiltration in female genital tuberculosis using RNA sequencing and bioinformatics analysis","authors":"Qi Wang ,&nbsp;Yaping Chen ,&nbsp;Yanfen Liu ,&nbsp;Bei Xie ,&nbsp;Huijuan Deng ,&nbsp;Fanrong Meng ,&nbsp;Nan Wang ,&nbsp;Defang Xiong ,&nbsp;Yuanjin Chen ,&nbsp;Zeyou Wei ,&nbsp;Pengyan Dong ,&nbsp;Bo Huang ,&nbsp;Yu Yang ,&nbsp;Xiaomin Lai ,&nbsp;Zhihui Liu ,&nbsp;Hua Li ,&nbsp;Weiyun He","doi":"10.1016/j.humgen.2026.201538","DOIUrl":"10.1016/j.humgen.2026.201538","url":null,"abstract":"<div><div>Female Genital Tuberculosis (FGTB) represents a rare but severe condition that significantly impacts women’s reproductive health and overall quality of life, incurring substantial economic burdens for both patients and society. The current diagnostic and therapeutic approaches for FGTB are limited, often resulting in delayed diagnosis and less than optimal treatment outcomes. This study aimed to elucidate the clinical characteristics of FGTB while identifying differentially expressed genes (DEGs) involved in its pathogenesis and immune response. We employed RNA sequencing and bioinformatics analyses of clinical samples to thoroughly evaluate the gene expression profiles of FGTB patients in comparison to healthy controls, revealing a total of 16,194 DEGs, comprising 588 upregulated and 179 downregulated genes, indicating significant differences between the two groups. Pathway analysis suggested that alterations in the complement/coagulation cascade, MAPK signaling, HIF-1 signaling, and IL-17 signaling pathways may elucidate the immune evasion mechanisms underlying FGTB. Moreover, key regulatory genes such as MMP8, CTSG, and AHSP were identified as influential in modulating immune infiltration responses, potentially altering the immune microenvironment. Notably, MMP8–Docetaxel exhibiting favorable binding energies in molecular docking, molecular dynamics Simulation and MM/PBSA Analysis. In conclusion, our findings provide a comprehensive understanding of the clinical features, gene expression alterations, and immune landscape in FGTB, paving the way for novel insights into early diagnosis and therapeutic strategies. Future research should prioritize larger sample sizes and clinical validation to further advance the understanding and management of this debilitating condition.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"47 ","pages":"Article 201538"},"PeriodicalIF":0.7,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146172956","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The impact of IL-6R gene polymorphism (rs8192284) on type 2 diabetes mellitus and other metabolic disorders in the Bangladeshi population IL-6R基因多态性(rs8192284)对孟加拉人群2型糖尿病及其他代谢紊乱的影响
IF 0.7
Human Gene Pub Date : 2026-02-01 Epub Date: 2026-02-02 DOI: 10.1016/j.humgen.2026.201536
Amirul Kabir, Md. Abdullah Al Mamun Khan, K.M. Kaderi Kibria
{"title":"The impact of IL-6R gene polymorphism (rs8192284) on type 2 diabetes mellitus and other metabolic disorders in the Bangladeshi population","authors":"Amirul Kabir,&nbsp;Md. Abdullah Al Mamun Khan,&nbsp;K.M. Kaderi Kibria","doi":"10.1016/j.humgen.2026.201536","DOIUrl":"10.1016/j.humgen.2026.201536","url":null,"abstract":"<div><h3>Background</h3><div>Type 2 diabetes mellitus (T2DM) is a multifactorial, polygenic metabolic disorder. This study aimed to investigate the prevalence of the Asp358Ala polymorphism in the IL-6R gene (rs8192284) in the Bangladeshi population and its association with specific metabolic syndromes.</div></div><div><h3>Method</h3><div>A total of 359 subjects (178 patients with type 2 diabetes and 181 non-diabetic controls) were enrolled from various healthcare centers in Bangladesh. Lifestyle factors and anthropometric data were gathered from study subjects using a standard questionnaire. Blood samples were collected for DNA extraction, and allele-specific PCR was performed for genotyping the SNP in the IL-6R gene. Accurate genotyping results were ensured by optimizing primer design and PCR conditions and validating them using DNA sequencing. The association between these data was analyzed using SPSS.</div></div><div><h3>Result</h3><div>IL6R polymorphisms showed no overall significant relationship with type 2 diabetes (<em>P</em> = 0.102); however, after analyzing according to the inheritance model, the dominant model was found to be significantly related to diabetes (<em>P</em> = 0.043). This suggests that the homozygous wild-type allele is more prone to diabetes, whereas the mutation appears to be associated with a reduced risk. Diabetic patients were also susceptible to pre-high and high blood pressure (<em>P</em> = 0.03). The assessment of SNP with a dominant model reveals an association between the A/A genotype and hypertension (<em>P</em> = 0.043). Analysis of variance revealed that diastolic blood pressure levels were elevated primarily in the A/A genotype (<em>P</em> = 0.019).</div></div><div><h3>Conclusion</h3><div>The study suggests that the IL6R polymorphism is associated with a reduced risk of diabetes. Additionally, the A/A genotype is responsible for hypertension, particularly diastolic blood pressure.</div></div>","PeriodicalId":29686,"journal":{"name":"Human Gene","volume":"47 ","pages":"Article 201536"},"PeriodicalIF":0.7,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146172955","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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