Tamires de Sousa Silva, Fábio Barros Britto, José Lindenberg Rocha Sarmento, Ana Paula Soares E Silva Matias, Dayane Pereira de Castro, Fabiana Cristina Belchior de Sousa, Francisca Kauanne Carvalho Silva, Natanael Pereira da Silva Santos
{"title":"Population structure of Santa Inês sheep: the impact of genomic information.","authors":"Tamires de Sousa Silva, Fábio Barros Britto, José Lindenberg Rocha Sarmento, Ana Paula Soares E Silva Matias, Dayane Pereira de Castro, Fabiana Cristina Belchior de Sousa, Francisca Kauanne Carvalho Silva, Natanael Pereira da Silva Santos","doi":"10.1007/s11250-025-04417-4","DOIUrl":"https://doi.org/10.1007/s11250-025-04417-4","url":null,"abstract":"<p><p>Information on genetic diversity and population structure among sheep breeds is essential for genetic improvement, understanding environmental adaptation, as well as the utilization and conservation of sheep breeds. This research aims to analyze the genomic population structure of Santa Inês sheep managed on different properties in northeastern Brazil. A total of 390 individuals were genotyped for 52,744 SNPs. The six flocks evaluated showed population differentiation indices (pairwise Fst) ranging from 0.0342 to 0.0938. Estimates of gene flow showed high values, ranging from 0.89 to 1 (Nm) between flocks 2 and 3, which are from the same town. The average value for inbreeding (Fis) and the overall genetic differentiation index (Fst) were -0.05 and 0.06 respectively, observed in the F statistic for each of the loci analyzed in the six flocks. These results indicate that diversity is concentrated within populations. After the simulations using the Bayesian clustering method, the most probable number of genetic groups (K) detected was 5, where flock 4 and 6 form a single group. It can be concluded that the samples from the six flocks form five genetic populations with a level of diversity that has been conserved. The results of this study can contribute with important genetic information and can adequately help diversity within the breed, which provides a good opportunity for the sustainable use and maintenance of improvements in genetic resources in Santa Inês sheep populations in Brazil.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"157"},"PeriodicalIF":1.7,"publicationDate":"2025-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143781220","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Insights into garlic (Allium Sativum)'s nutrigenomics-associated fly-repellent potency in cattle.","authors":"Fhulufhelo Mudau, Obioha Durunna, Cletos Mapiye, Farouk Semwogerere, Frans Hagg, Emiliano Raffrenato, Annelin Molotsi","doi":"10.1007/s11250-025-04406-7","DOIUrl":"10.1007/s11250-025-04406-7","url":null,"abstract":"<p><p>Despite effective control of flies using synthetic pesticides, fly resistance and environmental contamination have led to the inadequacy of this strategy. The use of integrated pest management approaches has since been advocated in contemporary research to sustainably control fly populations. Recent studies have found garlic (Allium Sativum) and its derivative bioactive compounds to possess insect-repellent attributes among other key health and production enhancing properties. This highlights the potential of garlic as a botanical pesticide to control flies in cattle. Moreover, the ability of cattle to naturally repel flies is influenced by animal genetic predisposition. The dietary garlic supplementation and gene interaction in disease resistance could also be an influential factor in repelling flies in cattle. Transcriptomics has emerged as a valuable tool in animal breeding and genetics which allows identification of trait-associated genes and understanding of complex interactions between dietary nutrients and animal genome expression. This paper explores the nutrigenomic effects of garlic supplementation on cattle and its contribution towards fly repellence efficacy in cattle. It was concluded that garlic supplementation in cattle diets could offer a sustainable approach to managing fly infestations in cattle farming. These findings underscore the importance of further research to validate these assertions and optimise the use of garlic to control flies in cattle under different production systems.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"154"},"PeriodicalIF":1.7,"publicationDate":"2025-04-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143773442","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Vanessa P Macedo, Amilton S de Mello, Leilson R Bezerra, Analívia M Barbosa, Thadeu Mariniello Silva, Ronaldo L Oliveira
{"title":"Physicochemical composition, fatty acid profile, and sensory attributes of salted sun-dried meat from different bovine crossbreeds.","authors":"Vanessa P Macedo, Amilton S de Mello, Leilson R Bezerra, Analívia M Barbosa, Thadeu Mariniello Silva, Ronaldo L Oliveira","doi":"10.1007/s11250-025-04412-9","DOIUrl":"10.1007/s11250-025-04412-9","url":null,"abstract":"<p><p>Sun-dried meat is a traditional dry-meat product from Northeastern Brazil, made using mild salting and drying techniques. Bos indicus cattle dominate Brazilian beef production due to their heat tolerance and parasite resistance, but crossbreeding with Bos taurus has improved the meat quality. This study evaluated biochemical transformations during sun-drying meat and the effects of three bovine genetic groups on physicochemical, fatty acids profile and sensory attributes. A completely randomized 3 × 2 factorial design was used with three genetic groups [Nellore (Nell), ½ Nellore ½ Angus (NellAn), and ½ Senepol ¼ Nellore ¼ Angus (SeNellAn)] and two meat types (fresh and sun-dried), totaling 18 experimental units. Fresh meat presented higher (P < 0.05) pH and L*, a*, b* and chroma intensity, and water activy (aW), water-holding capacity (WHC), cooking weight loss (CWL) and Warner-Bratzler Shear Force (WBSF) compared to sun-dried meat. The b* color index was similar between meat type (P > 0.05). Protein, fat and moisture contents were higher (P < 0.05) in fresh meat, in contrast, ash and collagen were higher (P < 0.05) in sun-dried meat. Sun-dried meat had impaired PUFA contents ant FA health indexes, however improved sensory scores. SeNellAn had better ∆<sup>9</sup>-C16 and ∆<sup>9</sup>-C18 activities, h:H index and sensory scores for tenderness and juiciness. Thus, sun-dried meat provided better texture and color indexes when compared to fresh meat. SeNellAn crossbreed provided better FA profile to the fresh meat, especially in PUFA profile and health indexes, as well a better sensory acceptability to tenderness and juiciness.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"156"},"PeriodicalIF":1.7,"publicationDate":"2025-04-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143773444","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pride Hodzi, Takudzwa Charambira, Takudzwa Mafigu, Blessed Masunda, Rumbidzai Nhara
{"title":"Characterization of urban production of roadrunner (indigenous) chicken in Harare, Zimbabwe.","authors":"Pride Hodzi, Takudzwa Charambira, Takudzwa Mafigu, Blessed Masunda, Rumbidzai Nhara","doi":"10.1007/s11250-025-04397-5","DOIUrl":"10.1007/s11250-025-04397-5","url":null,"abstract":"<p><p>In many developing countries, Roadrunner (Indigenous) chicken production in urban areas offers multifaceted opportunities. However,Plea this local enterprise also has some potential hazards and constraints. The research aimed to characterize Roadrunner chicken production in Harare. A descriptive survey was conducted whereby 107 respondents were identified using a multistage sampling approach and were interviewed using a semi-structured questionnaire. Respondents comprised 52% men and 48% women. Roadrunner chickens were kept either for sale only (58%) or both household consumption and sale (42%). All the respondents (100%) were not registered as poultry producers. The Roadrunner chicken breeds kept were the Boschveld (41%), Koekoek (21%), Autralorp (20%) and non-discrete native strains. The average flock size was 125, ranging from 25 to 715 birds and the average stocking density was 7 birds/m<sup>2</sup>. Only 8% of respondents practiced the free range system with supplementation and the rest (92%) provided feed to the chickens. Sixty-two percent (62%) of the farmers vaccinated their chickens against common poultry diseases. The average mortality rate was 7%, being caused by diseases (99%) and unknown (1%). Bio-security was achieved through cleaning, disinfection and restricted entry. The most preffered age at sale was 18-24 weeks. An informal market system was mainly used (95%) and the average selling price per bird was $8 (ranging from $6-$11). The most commonly reported challenges were unreliable customers, lack of capital, few markets, theft, and insufficient feeds. Adressing these challenges could improve urban production of roadrunner chickens and have a positive impact on Zimbabwe Poultry Industry.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"155"},"PeriodicalIF":1.7,"publicationDate":"2025-04-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143773425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ahmed S H Soliman, Shymaa Sobhy Mourad, Amira Abdalla Abdelshafy Mohamed
{"title":"Exploring the impact of chia seeds and matcha green tea on gene expression related to the puberty pathway in growing male New Zealand white rabbits.","authors":"Ahmed S H Soliman, Shymaa Sobhy Mourad, Amira Abdalla Abdelshafy Mohamed","doi":"10.1007/s11250-025-04391-x","DOIUrl":"10.1007/s11250-025-04391-x","url":null,"abstract":"<p><p>Abundant direct and in-direct genes are involved in regulating sexual hormones, and reproductive process under nitrite antioxidant plants in rabbit feed. However, there is not enough information about the role of chia seeds and matcha tea as anti-oxidative plants inhibit some direct and in-direct genes related to puberty of growing male rabbits. In this study New-Zealand White (NZW) rabbits treated with chia seeds and matcha tea in water from age after weaning to marketing age about two months ago and determent some sexual hormones, direct and in-direct genes related to puberty and reproduction process. Our data showed total testosterone measured by ELISA increased significantly in chia rabbits compared to control. ELISA analysis revealed that there were no alterations in the levels of follicle stimulating hormone (FSH) and luteinizing hormone (LH) in the treated groups. Direct genes such as doublesex and mab-3 related transcription factor 1 (DMRT1), sex-determining region Y protein (SRY), and gonadotropin-releasing hormone 1 (GnRH1) determent by qPCR show up-regulating in matcha groups comparable to control group. While in-direct genes follicle stimulating hormone receptor (FSHR) and estrogen receptor 1 (ESR1) detected by qPCR showed up-regulated in matcha rabbits compared to control rabbits. But, luteinizing hormone receptor (LHR) gene was down-regulated in matcha group, and it was up-regulated in chia seeds groups. The prolactin receptor (PRLR) gene investigates down-regulation in all treatment groups. Collectively, matcha tea as one of antioxidant plants were involved those genes studied and activated via hypothalamic- pituitary gonadal axis and led to early puberty in growing male NZW rabbits.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"152"},"PeriodicalIF":1.7,"publicationDate":"2025-04-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143765215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Abdelfattah Selim, Mohamed Marzok, Hattan S Gattan, Khulud Bukhari
{"title":"Seroprevalence and risk factors of Peste des Petits Ruminants virus infection in small ruminants in the Nile Delta Region of Egypt.","authors":"Abdelfattah Selim, Mohamed Marzok, Hattan S Gattan, Khulud Bukhari","doi":"10.1007/s11250-025-04368-w","DOIUrl":"https://doi.org/10.1007/s11250-025-04368-w","url":null,"abstract":"<p><p>This study aimed to evaluate the seroprevalence of Peste des Petits Ruminants Virus (PPRV) in small ruminants (sheep and goats) across three governorates in the Nile Delta region of Egypt and to identify the associated risk factors. A total of 780 samples were collected and analyzed for PPRV antibodies. The overall seroprevalence was 30.5%, with significant variations between sex, age, flock size, vaccination status, introduction of new animals and water source. The highest seroprevalence was observed in female animals (32.5%), adult animals (43.8%), and large flock (62.3%). Additionally, unvaccinated animals and those sharing water sources had a higher likelihood of seropositivity. Logistic regression analysis confirmed that age, sex, herd size, and vaccination status were significantly associated with PPRV infection. These findings emphasize the need for targeted vaccination campaigns, better management practices, and stricter control of animal movement and water source sharing to reduce the spread of PPR in small ruminants.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"153"},"PeriodicalIF":1.7,"publicationDate":"2025-04-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143765240","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mamdouh Elsayed, Khaled M Al-Marakby, Sabry Abdel Hafez, Sameh A Abdelnour
{"title":"The supplementation of dietary black cumin (Nigella Sativa) seeds on performance, blood hematology, post-metabolic responses, antioxidant status, immunity, and inflammatory markers in pre-weaning calves.","authors":"Mamdouh Elsayed, Khaled M Al-Marakby, Sabry Abdel Hafez, Sameh A Abdelnour","doi":"10.1007/s11250-025-04373-z","DOIUrl":"10.1007/s11250-025-04373-z","url":null,"abstract":"<p><p>Pre-weaning feeding is critical for calf growth, laying the foundation for future productivity and health. Nigella sativa seeds (NS) are rich in bioactive compounds with numerous beneficial effects on health and various pharmacological properties. This study aimed to investigate the supplementation of NS powder on performance, post-metabolic attributes, immunity, antioxidant capacity, and inflammatory responses in pre-weaning Friesian calves. Twenty-four Friesian male calves at 4 days of age with a similar genetic line, weighing 33.67 ± 0.6 kg, were randomly allocated to three groups (8 animals per group). The study comprised three groups: a control group (NS0) receiving no supplementation, and two experimental groups received either 1% (NS1) or 3% (NS3) NS supplementation for 84 days. All levels of NS supplementation significantly improved the final body weight and body weight gain in a linear manner (P < 0.001), while the highest total dry matter intake was observed in NS1 group (quadratic; P < 0.001). White blood cells (quadratic, P = 0.026), lymphocytes (quadratic, P = 0.012), and monocytes (linear effect; P = 0.001) significantly decreased, whereas red blood cells (linear; P = 0.004), hematocrit (linear; P = 0.002), mean corpuscular volume (MCV, linear; P = 0.003), and mean corpuscular hemoglobin concentration (MCHC, quadratic, P = 0.007), platelets (linear; P < 0.001) increased in calves fed NS. Feeding calves diets supplemented with NS led to a significant linear decrease in plasma creatinine and liver enzymes (AST and ALT) compared to the control diet (P < 0.01). Calves fed 3% of NS in their diets had lower plasma cholesterol (linear; P < 0.001) and triglyceride levels (linear; P = 0.002) compared to calves in NS0 and NS1 groups. Polynomial analysis indicated a quadratic decrease in direct bilirubin (P = 0.006), and a quadratic increase in immunoglobulin G (IgG, P = 0.014) and M (IgM, P = 0.032) in the calves fed the NS diet. All NS-supplemented groups showed a significant increase in IL-10 (linear; P < 0.001), TAC (linear; P = 0.006), and CAT (linear; P < 0.001), and a significant decrease in IL-4 levels (linear; P < 0.001) of the plasma of pre-weaning calves. As expected, pre-weaning calves fed diets containing NS (1% or 3%) exhibited a quadratic decrease in plasma malondialdehyde (MDA, P < 0.001) levels compared to those fed diets without NS. Our findings suggest that incorporating up to 3% Nigella sativa into pre-weaning calf diets can enhance growth, bolster immune function, and mitigate oxidative stress, offering a promising strategy for improving health and sustainability on dairy farms.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"151"},"PeriodicalIF":1.7,"publicationDate":"2025-04-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143765243","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Abdelfattah Selim, Mohamed Marzok, Hattan S Gattan, Abdelrahman M Hereba
{"title":"Factors influencing Akabane virus seroprevalence in sheep and goats in Egypt's Nile Delta.","authors":"Abdelfattah Selim, Mohamed Marzok, Hattan S Gattan, Abdelrahman M Hereba","doi":"10.1007/s11250-025-04377-9","DOIUrl":"https://doi.org/10.1007/s11250-025-04377-9","url":null,"abstract":"<p><p>This study aimed to investigate the seroprevalence of Akabane virus (AKAV) in sheep and goats in the Nile Delta of Egypt. A total of 820 samples were collected, consisting of 420 sheep and 400 goats, from four governorates and analyzed using competitive enzyme-linked immunosorbent assay (cELISA). The overall seroprevalence of AKAV was found to be 12.8%, with rates of 11.9% in sheep and 13.8% in goats. Furthermore, the seroprevalence of AKAV infection was significantly associated with various factors, including sex, age, flock size, history of abortion, and the presence of vectors. The odds of AKAV infection were significantly increased twofold in females with a history of abortion, threefold in older animals, and in the presence of vectors. Additionally, the odds were eight times higher in animals raised in flocks of more than twenty. The findings emphasize the need for enhanced surveillance and control measures to mitigate the spread of AKAV, particularly in high-risk populations.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"146"},"PeriodicalIF":1.7,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143754651","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Adilah Adawiah, Anja Meryandini, Roni Ridwan, Rusli Fidriyanto, Ki Ageng Sarwono, Komang Gede Wiryawan
{"title":"The rumen microbiome and metabolome profile of Ongole crossbreed cattle fed probiotics and protected amino acids.","authors":"Adilah Adawiah, Anja Meryandini, Roni Ridwan, Rusli Fidriyanto, Ki Ageng Sarwono, Komang Gede Wiryawan","doi":"10.1007/s11250-025-04400-z","DOIUrl":"https://doi.org/10.1007/s11250-025-04400-z","url":null,"abstract":"<p><p>This study aimed to investigate the microbial population dynamics and metabolite profiles of Ongole crossbreed cattle (OCC) fed a combination of feed additives using metagenomic and metabolomic analyses. A crossover design was employed, involving four 3-year-old fistulated OCC bulls, each receiving four distinct dietary treatments per experimental period, followed by a washout phase with a basal diet. The treatments consisted of a basal diet (G1) as control, and the addition of feed additives as follows: G2: probiotics (Lactiplantibacillus plantarum); G3: premix; G4: G2 + G3 + amino acids lysine and methionine; and G5: G2 + G3 + amino acids protected with tannin. Rumen fluid was collected for the analysis of microbiome dynamics and metabolite profiles. The bacterial communities in diets G1, G2, G3, and G5 exhibited similar compositions, dominated by Bacteroidota, particularly the genus Prevotella. The G5 diet successfully suppressed the population of archaea, notably Methanosarcinales and Methanobacteriales, which are associated with methane production. A total of 28 significant metabolites (VIP > 1) was identified in rumen fluid, including lipid prenols, phenolic compounds, indoles and derivatives, saturated and unsaturated hydrocarbons, fatty acyls, benzene derivatives, and organooxygen compounds. The volatile compounds profile of rumen fluid showed a marked increase in prenol lipid compounds, especially in the G5 diet. Additionally, Methanosarcinales and Methanobacteriales were negatively correlated with prenol lipid levels. The inclusion of probiotics and protected amino acids alters the microbiome community structure and metabolites, positively affecting ruminant productivity.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"148"},"PeriodicalIF":1.7,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143754641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
G R Gowane, Rani Alex, Destaw Worku, Supriya Chhotaray, Anupama Mukherjee, Vikas Vohra
{"title":"Optimizing multi-breed joint genomic prediction issues in numerically small breeds for sex-limited trait in a loosely structured dairy cattle breeding system.","authors":"G R Gowane, Rani Alex, Destaw Worku, Supriya Chhotaray, Anupama Mukherjee, Vikas Vohra","doi":"10.1007/s11250-025-04407-6","DOIUrl":"https://doi.org/10.1007/s11250-025-04407-6","url":null,"abstract":"<p><p>Genomic prediction is crucial in the developed dairy industry, but implementing it in resource-poor regions with numerically small breeds and with no historic pedigree information is challenging. This study explores possibilities for joint genomic prediction, using genomic best linear unbiased prediction (GBLUP) across four closely related breeds for sex-limited traits when recently collected genomic information and phenotypes are available. The data was simulated to cover low (0.1) and moderate (0.3) heritability scenarios. Principal Component Analysis (PCA) revealed genetic relatedness among breeds, with the first two components explaining 80% of variance. Combining breeds for genetic evaluation using only genomic information enhanced prediction accuracy and reduced bias in genomically estimated breeding values (GEBV) compared to single-breed models. Ancestry-specific allele frequencies and allelic effects had minimal impact due to genetic similarity between breeds. Multi-breed evaluation substantially improved accuracy. The multi-breed two-tailed selective genotyping model (MTB) had better accuracy of prediction than top-selected (MTOP) and randomly selected (MRND) models. However, looking into standard error for accuracy of prediction of GEBV and least bias of prediction, MRND model is recommended for multi-breed joint prediction evaluation in numerically small breeds. For 0.3 h<sup>2</sup> scenario, MTOP gained 17.89% accuracy, MTB gained 20%, and MRND gained 24.39% over single breed models. Similar trends were seen in the low heritability (0.1) scenario. For small breeds without pedigree records data, adopting a multi-breed joint evaluation with random selective genotyping is recommended. This strategy has potential to integrate crucial breeds into genomic selection while conserving resources in genotyping and data recording in resource-poor regions.</p>","PeriodicalId":23329,"journal":{"name":"Tropical animal health and production","volume":"57 3","pages":"149"},"PeriodicalIF":1.7,"publicationDate":"2025-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143754659","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}