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Accumulation of newly synthesized docosahexaenoic acid plays an essential role in heart regeneration. 新合成的二十二碳六烯酸的积累在心脏再生中起重要作用。
IF 12.8 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf062
Zimu Tang, Zhaoxiang Sun, Chun Yang, Qian Gong, Zirui Liu, Nanhui Chen, Kai Liu, Yong Wang, Ting Zhao, Shengfan Ye, Lenan Zhuang, Jiahao Lin, Wei-Qiang Tan, Jinrong Peng, Jun Chen
{"title":"Accumulation of newly synthesized docosahexaenoic acid plays an essential role in heart regeneration.","authors":"Zimu Tang, Zhaoxiang Sun, Chun Yang, Qian Gong, Zirui Liu, Nanhui Chen, Kai Liu, Yong Wang, Ting Zhao, Shengfan Ye, Lenan Zhuang, Jiahao Lin, Wei-Qiang Tan, Jinrong Peng, Jun Chen","doi":"10.1093/procel/pwaf062","DOIUrl":"https://doi.org/10.1093/procel/pwaf062","url":null,"abstract":"<p><p>Adult zebrafish and neonatal mice can fully regenerate their hearts after partial amputation through proliferation of pre-existing cardiomyocytes (CMs). However, the adult mammalian heart has limited regenerative capability following cardiac damage. The reason for this phenomenon remains elusive. Here, we find that docosahexaenoic acid (DHA) is accumulated only in the injury hearts of zebrafish and neonatal mice, but not of adult mice, which coincides with the upregulation of DHA synthesis genes in CMs, fibrobasts and macrophages near the injury areas. Inhibition of Fads2, a DHA synthesis enzyme, impairs heart regeneration in both zebrafish and neonatal mice. Injection of DHA remodels transcriptome from injury response to regeneration response and improves cardiac function in adult mice after myocardial infarction. Interestingly, DHA facilitates CM proliferation, but inhibits fibrosis and inflammation. Mechanistically, only DHA, but not oleic acid (OA), can trigger the peroxisome proliferator-activated receptor d (PPARD) to bind to the promoter regions of heart regeneration related genes such as: Mef2d, Phlda3 and Txndc5 to regulate their expression. Molecular docking, molecular dynamics simulations and mutagenesis experiments suggest that DHA binds to PPARD in a distinct manner compared to OA, which may help explain their differing abilities to influence the expression of heart regeneration genes. Our findings demonstrate that the DHA signal plays an essential and evolutionarily conserved role in heart regeneration and provide a therapeutic potential for myocardial infarction.</p>","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":" ","pages":""},"PeriodicalIF":12.8,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144966436","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structural basis of allosteric and bitopic ligands binding in sphingosine-1-phosphate receptors 2 and 3. 鞘氨醇-1-磷酸受体2和3变构和双配体结合的结构基础。
IF 12.8 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf068
Yanhong Wu, Qiuru Chen, Hongyu Wang, Kezhen Liu, Jiaxin Wei, Mu Wang, Kun Chen, Ya Zhu, Shuo Han, Cuiying Yi, Limin Ma, Gisela Schnapp, Alexander Pautsch, Christian Gnamm, Matthias Grauert, Esther Schmidt, Qiuxiang Tan, Beili Wu, Qiang Zhao
{"title":"Structural basis of allosteric and bitopic ligands binding in sphingosine-1-phosphate receptors 2 and 3.","authors":"Yanhong Wu, Qiuru Chen, Hongyu Wang, Kezhen Liu, Jiaxin Wei, Mu Wang, Kun Chen, Ya Zhu, Shuo Han, Cuiying Yi, Limin Ma, Gisela Schnapp, Alexander Pautsch, Christian Gnamm, Matthias Grauert, Esther Schmidt, Qiuxiang Tan, Beili Wu, Qiang Zhao","doi":"10.1093/procel/pwaf068","DOIUrl":"https://doi.org/10.1093/procel/pwaf068","url":null,"abstract":"","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":" ","pages":""},"PeriodicalIF":12.8,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144966406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structure-based engineering of the midnolin-proteasome pathway for targeted protein degradation. 靶向蛋白降解midnolin-蛋白酶体途径的结构工程。
IF 12.8 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf069
Hongyang Wang, Ying Zheng, Tiantian Wang, Xue Zhang, Peipei Wang, Chuancun Wei, Hongyue Li, Quan Wang, Lu Zhang, Xisong Ke, Wenqing Xu
{"title":"Structure-based engineering of the midnolin-proteasome pathway for targeted protein degradation.","authors":"Hongyang Wang, Ying Zheng, Tiantian Wang, Xue Zhang, Peipei Wang, Chuancun Wei, Hongyue Li, Quan Wang, Lu Zhang, Xisong Ke, Wenqing Xu","doi":"10.1093/procel/pwaf069","DOIUrl":"https://doi.org/10.1093/procel/pwaf069","url":null,"abstract":"","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":" ","pages":""},"PeriodicalIF":12.8,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144966429","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structural basis of allosteric and bitopic ligands binding in sphingosine-1-phosphate receptors 2 and 3. 鞘氨醇-1-磷酸受体2和3变构和双配体结合的结构基础。
IF 21.1 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf068
Yanhong Wu,Qiuru Chen,Hongyu Wang,Kezhen Liu,Jiaxin Wei,Mu Wang,Kun Chen,Ya Zhu,Shuo Han,Cuiying Yi,Limin Ma,Gisela Schnapp,Alexander Pautsch,Christian Gnamm,Matthias Grauert,Esther Schmidt,Qiuxiang Tan,Beili Wu,Qiang Zhao
{"title":"Structural basis of allosteric and bitopic ligands binding in sphingosine-1-phosphate receptors 2 and 3.","authors":"Yanhong Wu,Qiuru Chen,Hongyu Wang,Kezhen Liu,Jiaxin Wei,Mu Wang,Kun Chen,Ya Zhu,Shuo Han,Cuiying Yi,Limin Ma,Gisela Schnapp,Alexander Pautsch,Christian Gnamm,Matthias Grauert,Esther Schmidt,Qiuxiang Tan,Beili Wu,Qiang Zhao","doi":"10.1093/procel/pwaf068","DOIUrl":"https://doi.org/10.1093/procel/pwaf068","url":null,"abstract":"","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":"14 1","pages":""},"PeriodicalIF":21.1,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144959926","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structure-based engineering of the midnolin-proteasome pathway for targeted protein degradation. 靶向蛋白降解midnolin-蛋白酶体途径的结构工程。
IF 21.1 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf069
Hongyang Wang,Ying Zheng,Tiantian Wang,Xue Zhang,Peipei Wang,Chuancun Wei,Hongyue Li,Quan Wang,Lu Zhang,Xisong Ke,Wenqing Xu
{"title":"Structure-based engineering of the midnolin-proteasome pathway for targeted protein degradation.","authors":"Hongyang Wang,Ying Zheng,Tiantian Wang,Xue Zhang,Peipei Wang,Chuancun Wei,Hongyue Li,Quan Wang,Lu Zhang,Xisong Ke,Wenqing Xu","doi":"10.1093/procel/pwaf069","DOIUrl":"https://doi.org/10.1093/procel/pwaf069","url":null,"abstract":"","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":"312 1","pages":""},"PeriodicalIF":21.1,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144959927","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tumor-associated macrophage-mediated delivery of nano-photosensitizer enables light-induced metabolic programming for immuno-photodynamic Therapy. 肿瘤相关巨噬细胞介导的纳米光敏剂的递送使光诱导代谢编程免疫光动力治疗。
IF 21.1 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf064
Hong Deng,Huimin Wang,Yiyi Zhang,Runmeng Liu,Wei Hou,Lin Wang,Haiyan Xu,Weiqi Zhang
{"title":"Tumor-associated macrophage-mediated delivery of nano-photosensitizer enables light-induced metabolic programming for immuno-photodynamic Therapy.","authors":"Hong Deng,Huimin Wang,Yiyi Zhang,Runmeng Liu,Wei Hou,Lin Wang,Haiyan Xu,Weiqi Zhang","doi":"10.1093/procel/pwaf064","DOIUrl":"https://doi.org/10.1093/procel/pwaf064","url":null,"abstract":"","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":"16 1","pages":""},"PeriodicalIF":21.1,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144960052","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Accumulation of newly synthesized docosahexaenoic acid plays an essential role in heart regeneration. 新合成的二十二碳六烯酸的积累在心脏再生中起重要作用。
IF 21.1 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf062
Zimu Tang,Zhaoxiang Sun,Chun Yang,Qian Gong,Zirui Liu,Nanhui Chen,Kai Liu,Yong Wang,Ting Zhao,Shengfan Ye,Lenan Zhuang,Jiahao Lin,Wei-Qiang Tan,Jinrong Peng,Jun Chen
{"title":"Accumulation of newly synthesized docosahexaenoic acid plays an essential role in heart regeneration.","authors":"Zimu Tang,Zhaoxiang Sun,Chun Yang,Qian Gong,Zirui Liu,Nanhui Chen,Kai Liu,Yong Wang,Ting Zhao,Shengfan Ye,Lenan Zhuang,Jiahao Lin,Wei-Qiang Tan,Jinrong Peng,Jun Chen","doi":"10.1093/procel/pwaf062","DOIUrl":"https://doi.org/10.1093/procel/pwaf062","url":null,"abstract":"Adult zebrafish and neonatal mice can fully regenerate their hearts after partial amputation through proliferation of pre-existing cardiomyocytes (CMs). However, the adult mammalian heart has limited regenerative capability following cardiac damage. The reason for this phenomenon remains elusive. Here, we find that docosahexaenoic acid (DHA) is accumulated only in the injury hearts of zebrafish and neonatal mice, but not of adult mice, which coincides with the upregulation of DHA synthesis genes in CMs, fibrobasts and macrophages near the injury areas. Inhibition of Fads2, a DHA synthesis enzyme, impairs heart regeneration in both zebrafish and neonatal mice. Injection of DHA remodels transcriptome from injury response to regeneration response and improves cardiac function in adult mice after myocardial infarction. Interestingly, DHA facilitates CM proliferation, but inhibits fibrosis and inflammation. Mechanistically, only DHA, but not oleic acid (OA), can trigger the peroxisome proliferator-activated receptor d (PPARD) to bind to the promoter regions of heart regeneration related genes such as: Mef2d, Phlda3 and Txndc5 to regulate their expression. Molecular docking, molecular dynamics simulations and mutagenesis experiments suggest that DHA binds to PPARD in a distinct manner compared to OA, which may help explain their differing abilities to influence the expression of heart regeneration genes. Our findings demonstrate that the DHA signal plays an essential and evolutionarily conserved role in heart regeneration and provide a therapeutic potential for myocardial infarction.","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":"71 1","pages":""},"PeriodicalIF":21.1,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144959928","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tumor-associated macrophage-mediated delivery of nano-photosensitizer enables light-induced metabolic programming for immuno-photodynamic Therapy. 肿瘤相关巨噬细胞介导的纳米光敏剂的递送使光诱导代谢编程免疫光动力治疗。
IF 12.8 1区 生物学
Protein & Cell Pub Date : 2025-08-20 DOI: 10.1093/procel/pwaf064
Hong Deng, Huimin Wang, Yiyi Zhang, Runmeng Liu, Wei Hou, Lin Wang, Haiyan Xu, Weiqi Zhang
{"title":"Tumor-associated macrophage-mediated delivery of nano-photosensitizer enables light-induced metabolic programming for immuno-photodynamic Therapy.","authors":"Hong Deng, Huimin Wang, Yiyi Zhang, Runmeng Liu, Wei Hou, Lin Wang, Haiyan Xu, Weiqi Zhang","doi":"10.1093/procel/pwaf064","DOIUrl":"https://doi.org/10.1093/procel/pwaf064","url":null,"abstract":"","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":" ","pages":""},"PeriodicalIF":12.8,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144966388","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MMP-9 regulates disulphide isomerase activity of TGM2 to enhance fusion glycoprotein-mediated syncytium formation of respiratory syncytial virus. MMP-9调节TGM2二硫异构酶活性,促进融合糖蛋白介导的呼吸道合胞病毒合胞体形成。
IF 12.8 1区 生物学
Protein & Cell Pub Date : 2025-08-11 DOI: 10.1093/procel/pwaf063
Bao Xue, Anqi Zhou, Yihang Zhong, Yuhan Mao, Ran Peng, Yuhang Chen, Jiayi Zhong, Junjun Liu, Yuan Zhou, Yuying Fang, Wei Zhang, Jielin Tang, Wei Peng, Jia Liu, Qi Yang, Xinwen Chen
{"title":"MMP-9 regulates disulphide isomerase activity of TGM2 to enhance fusion glycoprotein-mediated syncytium formation of respiratory syncytial virus.","authors":"Bao Xue, Anqi Zhou, Yihang Zhong, Yuhan Mao, Ran Peng, Yuhang Chen, Jiayi Zhong, Junjun Liu, Yuan Zhou, Yuying Fang, Wei Zhang, Jielin Tang, Wei Peng, Jia Liu, Qi Yang, Xinwen Chen","doi":"10.1093/procel/pwaf063","DOIUrl":"https://doi.org/10.1093/procel/pwaf063","url":null,"abstract":"<p><p>Respiratory syncytial virus (RSV) exploits host proteases to enhance its replication efficiency; however, the precise mechanisms remain unclear. Through high-throughput screening, we identified four matrix metalloproteinase 9 (MMP-9) inhibitors (including JNJ0966 and doxycycline hyclate) that suppress RSV infection in vitro and in vivo. Mechanistic studies revealed a proteolytic cascade wherein MMP-9 cleaves transglutaminase 2 (TGM2) at the PVP375↓VR site, generating an N-terminal fragment (1-375) that activates its protein disulfide isomerase (PDI) activity. This TGM2-dependent PDI activity catalyzes disulfide bond rearrangement in the RSV fusion glycoprotein (F), enabling F protein maturation, a prerequisite for membrane fusion and syncytium formation-key processes driving late-stage viral propagation. Genetic ablation of MMP-9 significantly attenuated RSV infectivity, while pharmacological inhibition reduced pulmonary viral loads and mitigated lung pathology in infected mice. Our study defines a unified MMP-9→TGM2→F axis as the core mechanism driving RSV replication and validates MMP-9 as a therapeutic target.</p>","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":" ","pages":""},"PeriodicalIF":12.8,"publicationDate":"2025-08-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144848529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Trophectoderm-like cells from EPS cells enable generating EPS cell-derived post-implantation embryoids that complete gastrulation. 来自EPS细胞的滋养外胚层样细胞能够产生EPS细胞衍生的着床后胚状体,完成原肠胚形成。
IF 12.8 1区 生物学
Protein & Cell Pub Date : 2025-08-11 DOI: 10.1093/procel/pwaf059
Xuyang Wang, Ruoqi Cheng, Chenyang Wu, Haiyin Liu, Zining Li, Yunfei Huo, Bo Li, Dongyu Zhao, Cheng Li, Hongkui Deng, Jun Xu
{"title":"Trophectoderm-like cells from EPS cells enable generating EPS cell-derived post-implantation embryoids that complete gastrulation.","authors":"Xuyang Wang, Ruoqi Cheng, Chenyang Wu, Haiyin Liu, Zining Li, Yunfei Huo, Bo Li, Dongyu Zhao, Cheng Li, Hongkui Deng, Jun Xu","doi":"10.1093/procel/pwaf059","DOIUrl":"https://doi.org/10.1093/procel/pwaf059","url":null,"abstract":"<p><p>Mouse extended pluripotent stem (EPS) cells have demonstrated significant potential for generating embryo models in vitro. However, their limited capacity for extraembryonic trophoblast development has hindered their use in constructing whole embryo models, particularly post-implantation embryoids. Here, we establish a stepwise induction protocol to generate trophectoderm-like cells from mouse EPS cells. These cells retain trophectoderm-specific transcriptomic features and can differentiate into trophoblast lineages in vivo. Moreover, combining these trophectoderm-like cells with EPS cell-derived primitive endoderm/epiblast bilineage structures enabled the robust generation of post-implantation embryoids in a transgene-free manner. EPS-derived embryoids recapitulate key developmental events of post-implantation mouse embryos, including the formation of the pro-amniotic cavity, anterior-posterior axis, primitive streak, gastrulation, and complex extraembryonic tissues. Notably, single-cell transcriptomic analysis revealed a high degree of transcriptional similarity between EPS-derived embryoids at day 6 and natural E7.5 mouse embryos. Our study presents a novel platform for modeling post-implantation mouse embryogenesis in vitro.</p>","PeriodicalId":20790,"journal":{"name":"Protein & Cell","volume":" ","pages":""},"PeriodicalIF":12.8,"publicationDate":"2025-08-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144848530","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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