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Cryphonectriaceae on Myrtales in China: phylogeny, host range, and pathogenicity. 中国桃金娘科植物:系统发育、寄主范围和致病性。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-12-01 Epub Date: 2020-01-21 DOI: 10.3767/persoonia.2020.45.04
W Wang, G Q Li, Q L Liu, S F Chen
{"title":"<i>Cryphonectriaceae</i> on <i>Myrtales</i> in China: phylogeny, host range, and pathogenicity.","authors":"W Wang,&nbsp;G Q Li,&nbsp;Q L Liu,&nbsp;S F Chen","doi":"10.3767/persoonia.2020.45.04","DOIUrl":"https://doi.org/10.3767/persoonia.2020.45.04","url":null,"abstract":"<p><p>Plantation-grown <i>Eucalyptus</i> (<i>Myrtaceae</i>) and other trees residing in the <i>Myrtales</i> have been widely planted in southern China. These fungal pathogens include species of <i>Cryphonectriaceae</i> that are well-known to cause stem and branch canker disease on <i>Myrtales</i> trees. During recent disease surveys in southern China, sporocarps with typical characteristics of <i>Cryphonectriaceae</i> were observed on the surfaces of cankers on the stems and branches of <i>Myrtales</i> trees. In this study, a total of 164 <i>Cryphonectriaceae</i> isolates were identified based on comparisons of DNA sequences of the partial conserved nuclear large subunit (LSU) ribosomal DNA, internal transcribed spacer (ITS) regions including the 5.8S gene of the ribosomal DNA operon, two regions of the β-tubulin (<i>tub2</i>/<i>tub1</i>) gene, and the translation elongation factor 1-alpha (<i>tef1</i>) gene region, as well as their morphological characteristics. The results showed that eight species reside in four genera of <i>Cryphonectriaceae</i> occurring on the genera <i>Eucalyptus</i>, <i>Melastoma</i> (<i>Melastomataceae</i>), <i>Psidium</i> (<i>Myrtaceae</i>), <i>Syzygium</i> (<i>Myrtaceae</i>), and <i>Terminalia</i> (<i>Combretaceae</i>) in <i>Myrtales</i>. These fungal species include <i>Chrysoporthe deuterocubensis</i>, <i>Celoporthe syzygii</i>, <i>Cel. eucalypti</i>, <i>Cel. guangdongensis</i>, <i>Cel. cerciana</i>, a new genus and two new species, as well as one new species of <i>Aurifilum</i>. These new taxa are hereby described as <i>Parvosmorbus</i> gen. nov., <i>Par. eucalypti</i> sp. nov., <i>Par. guangdongensis</i> sp. nov., and <i>Aurifilum terminali</i> sp. nov. Pathogenicity tests showed that the eight species of <i>Cryphonectriaceae</i> are pathogenic to two <i>Eucalyptus</i> hybrid seedlings, <i>Melastoma sanguineum</i> branches, and <i>Psidium guajava</i> and <i>Syzygium jambos</i> seedlings. The overall data showed that <i>Chr. deuterocubensis</i> is the most aggressive, followed by <i>Par. eucalypti</i>. Significant differences in tolerance were observed between the two tested <i>Eucalyptus</i> hybrid genotypes, suggesting that disease-tolerant genotypes can be selected for disease management in the <i>Eucalyptus</i> industry.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"45 ","pages":"101-131"},"PeriodicalIF":9.1,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/d9/b3/per-2020-45-4.PMC8375347.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39363976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 9
High diversity of Diaporthe species associated with pear shoot canker in China. 中国梨枝溃疡病伴生孢子的高度多样性。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-12-01 Epub Date: 2020-02-06 DOI: 10.3767/persoonia.2020.45.05
Y S Guo, P W Crous, Q Bai, M Fu, M M Yang, X H Wang, Y M Du, N Hong, W X Xu, G P Wang
{"title":"High diversity of <i>Diaporthe</i> species associated with pear shoot canker in China.","authors":"Y S Guo,&nbsp;P W Crous,&nbsp;Q Bai,&nbsp;M Fu,&nbsp;M M Yang,&nbsp;X H Wang,&nbsp;Y M Du,&nbsp;N Hong,&nbsp;W X Xu,&nbsp;G P Wang","doi":"10.3767/persoonia.2020.45.05","DOIUrl":"https://doi.org/10.3767/persoonia.2020.45.05","url":null,"abstract":"<p><p>Species of <i>Diaporthe</i> (syn. <i>Phomopsis</i>) are important endophytes, saprobes and pathogens, infecting a wide range of plants and resulting in important crop diseases. However, the species occurring on pear remain largely unresolved. In this study, a total of 453 <i>Diaporthe</i> isolates were obtained from branches of <i>Pyrus</i> plants (including <i>P. bretschneideri</i>, <i>P. communis</i>, <i>P. pyrifolia</i> and <i>P. ussuriensis</i> collected from 12 provinces in China) showing shoot canker symptoms. Phylogenetic analyses based on five loci (ITS, <i>TEF</i>, <i>CAL</i>, <i>HIS</i>, and <i>TUB</i>) coupled with morphology of 113 representative isolates revealed that 19 <i>Diaporthe</i> species were isolated, representing 13 known species (including <i>D. caryae</i>, <i>D. cercidis</i>, <i>D. citrichinensis</i>, <i>D. eres</i>, <i>D. fusicola</i>, <i>D. ganjae</i>, <i>D. hongkongensis</i>, <i>D. padina</i>, <i>D.</i> <i>pescicola</i>, <i>D. sojae</i>, <i>D. taoicola</i>, <i>D. unshiuensis</i> and <i>D. velutina</i>) and six new species described here as <i>D. acuta</i>, <i>D. chongqingensis</i>, <i>D. fulvicolor</i>, <i>D. parvae</i>, <i>D. spinosa</i> and <i>D. zaobaisu</i>. Although Koch's postulates confirmed all species to be pathogenic, a high degree of variation in aggressiveness was observed. Moreover, these species have a high diversity, plasticity, and prevalence related to the geographical location and pear species involved.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"45 ","pages":"132-162"},"PeriodicalIF":9.1,"publicationDate":"2020-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/6d/55/per-2020-45-5.PMC8375346.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39363390","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 46
Multi-gene phylogeny and taxonomy of Amauroderma s.lat. (Ganodermataceae). 黑皮病的多基因系统发育与分类。(灵芝科)。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2020-05-04 DOI: 10.3767/persoonia.2020.44.08
Y-F Sun, D H Costa-Rezende, J-H Xing, J-L Zhou, B Zhang, T B Gibertoni, G Gates, M Glen, Y-C Dai, B-K Cui
{"title":"Multi-gene phylogeny and taxonomy of <i>Amauroderma</i> s.lat. (<i>Ganodermataceae</i>).","authors":"Y-F Sun,&nbsp;D H Costa-Rezende,&nbsp;J-H Xing,&nbsp;J-L Zhou,&nbsp;B Zhang,&nbsp;T B Gibertoni,&nbsp;G Gates,&nbsp;M Glen,&nbsp;Y-C Dai,&nbsp;B-K Cui","doi":"10.3767/persoonia.2020.44.08","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.08","url":null,"abstract":"<p><p><i>Amauroderma</i> s.lat. has been defined mainly by the morphological features of non-truncate and double-walled basidiospores with a distinctly ornamented endospore wall. In this work, taxonomic and phylogenetic studies on species of <i>Amauroderma</i> s.lat. are carried out by morphological examination together with ultrastructural observations, and molecular phylogenetic analyses of multiple loci including the internal transcribed spacer regions (ITS), the large subunit of nuclear ribosomal RNA gene (nLSU), the largest subunit of RNA polymerase II (<i>RPB1</i>) and the second largest subunit of RNA polymerase II (<i>RPB2</i>), the translation elongation factor 1-α gene (<i>TEF</i>) and the β-tubulin gene (<i>TUB</i>). The results demonstrate that species of <i>Ganodermataceae</i> formed ten clades. Species previously placed in <i>Amauroderma</i> s.lat. are divided into four clades: <i>Amauroderma</i> s.str., <i>Foraminispora</i>, <i>Furtadoa</i> and a new genus <i>Sanguinoderma</i>. The classification of <i>Amauroderma</i> s.lat. is thus revised, six new species are described and illustrated, and eight new combinations are proposed. SEM micrographs of basidiospores of <i>Foraminispora</i> and <i>Sanguinoderma</i> are provided, and the importance of SEM in delimitation of taxa in this study is briefly discussed. Keys to species of <i>Amauroderma</i> s.str., <i>Foraminispora</i>, <i>Furtadoa</i>, and <i>Sanguinoderma</i> are also provided.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"206-239"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.08","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538557","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 41
Fungal Planet description sheets: 1042-1111. 真菌星球描述表:1042-1111。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2020-06-29 DOI: 10.3767/persoonia.2020.44.11
P W Crous, M J Wingfield, Y-H Chooi, C L M Gilchrist, E Lacey, J I Pitt, F Roets, W J Swart, J F Cano-Lira, N Valenzuela-Lopez, V Hubka, R G Shivas, A M Stchigel, D G Holdom, Ž Jurjević, A V Kachalkin, T Lebel, C Lock, M P Martín, Y P Tan, M A Tomashevskaya, J S Vitelli, I G Baseia, V K Bhatt, T E Brandrud, J T De Souza, B Dima, H J Lacey, L Lombard, P R Johnston, A Morte, V Papp, A Rodríguez, E Rodríguez-Andrade, K C Semwal, L Tegart, Z G Abad, A Akulov, P Alvarado, A Alves, J P Andrade, F Arenas, C Asenjo, J Ballarà, M D Barrett, L M Berná, A Berraf-Tebbal, M V Bianchinotti, K Bransgrove, T I Burgess, F S Carmo, R Chávez, A Čmoková, J D W Dearnaley, A L C M de A Santiago, J F Freitas-Neto, S Denman, B Douglas, F Dovana, A Eichmeier, F Esteve-Raventós, A Farid, A G Fedosova, G Ferisin, R J Ferreira, A Ferrer, C N Figueiredo, Y F Figueiredo, C G Reinoso-Fuentealba, I Garrido-Benavent, C F Cañete-Gibas, C Gil-Durán, A M Glushakova, M F M Gonçalves, M González, M Gorczak, C Gorton, F E Guard, A L Guarnizo, J Guarro, M Gutiérrez, P Hamal, L T Hien, A D Hocking, J Houbraken, G C Hunter, C A Inácio, M Jourdan, V I Kapitonov, L Kelly, T N Khanh, K Kisło, L Kiss, A Kiyashko, M Kolařík, J Kruse, A Kubátová, V Kučera, I Kučerová, I Kušan, H B Lee, G Levicán, A Lewis, N V Liem, K Liimatainen, H J Lim, M N Lyons, J G Maciá-Vicente, V Magaña-Dueñas, R Mahiques, E F Malysheva, P A S Marbach, P Marinho, N Matočec, A R McTaggart, A Mešić, L Morin, J M Muñoz-Mohedano, A Navarro-Ródenas, C P Nicolli, R L Oliveira, E Otsing, C L Ovrebo, T A Pankratov, A Paños, A Paz-Conde, A Pérez-Sierra, C Phosri, Á Pintos, A Pošta, S Prencipe, E Rubio, A Saitta, L S Sales, L Sanhueza, L A Shuttleworth, J Smith, M E Smith, D Spadaro, M Spetik, M Sochor, Z Sochorová, J O Sousa, N Suwannasai, L Tedersoo, H M Thanh, L D Thao, Z Tkalčec, N Vaghefi, A S Venzhik, A Verbeken, A Vizzini, S Voyron, M Wainhouse, A J S Whalley, M Wrzosek, M Zapata, I Zeil-Rolfe, J Z Groenewald
{"title":"Fungal Planet description sheets: 1042-1111.","authors":"P W Crous,&nbsp;M J Wingfield,&nbsp;Y-H Chooi,&nbsp;C L M Gilchrist,&nbsp;E Lacey,&nbsp;J I Pitt,&nbsp;F Roets,&nbsp;W J Swart,&nbsp;J F Cano-Lira,&nbsp;N Valenzuela-Lopez,&nbsp;V Hubka,&nbsp;R G Shivas,&nbsp;A M Stchigel,&nbsp;D G Holdom,&nbsp;Ž Jurjević,&nbsp;A V Kachalkin,&nbsp;T Lebel,&nbsp;C Lock,&nbsp;M P Martín,&nbsp;Y P Tan,&nbsp;M A Tomashevskaya,&nbsp;J S Vitelli,&nbsp;I G Baseia,&nbsp;V K Bhatt,&nbsp;T E Brandrud,&nbsp;J T De Souza,&nbsp;B Dima,&nbsp;H J Lacey,&nbsp;L Lombard,&nbsp;P R Johnston,&nbsp;A Morte,&nbsp;V Papp,&nbsp;A Rodríguez,&nbsp;E Rodríguez-Andrade,&nbsp;K C Semwal,&nbsp;L Tegart,&nbsp;Z G Abad,&nbsp;A Akulov,&nbsp;P Alvarado,&nbsp;A Alves,&nbsp;J P Andrade,&nbsp;F Arenas,&nbsp;C Asenjo,&nbsp;J Ballarà,&nbsp;M D Barrett,&nbsp;L M Berná,&nbsp;A Berraf-Tebbal,&nbsp;M V Bianchinotti,&nbsp;K Bransgrove,&nbsp;T I Burgess,&nbsp;F S Carmo,&nbsp;R Chávez,&nbsp;A Čmoková,&nbsp;J D W Dearnaley,&nbsp;A L C M de A Santiago,&nbsp;J F Freitas-Neto,&nbsp;S Denman,&nbsp;B Douglas,&nbsp;F Dovana,&nbsp;A Eichmeier,&nbsp;F Esteve-Raventós,&nbsp;A Farid,&nbsp;A G Fedosova,&nbsp;G Ferisin,&nbsp;R J Ferreira,&nbsp;A Ferrer,&nbsp;C N Figueiredo,&nbsp;Y F Figueiredo,&nbsp;C G Reinoso-Fuentealba,&nbsp;I Garrido-Benavent,&nbsp;C F Cañete-Gibas,&nbsp;C Gil-Durán,&nbsp;A M Glushakova,&nbsp;M F M Gonçalves,&nbsp;M González,&nbsp;M Gorczak,&nbsp;C Gorton,&nbsp;F E Guard,&nbsp;A L Guarnizo,&nbsp;J Guarro,&nbsp;M Gutiérrez,&nbsp;P Hamal,&nbsp;L T Hien,&nbsp;A D Hocking,&nbsp;J Houbraken,&nbsp;G C Hunter,&nbsp;C A Inácio,&nbsp;M Jourdan,&nbsp;V I Kapitonov,&nbsp;L Kelly,&nbsp;T N Khanh,&nbsp;K Kisło,&nbsp;L Kiss,&nbsp;A Kiyashko,&nbsp;M Kolařík,&nbsp;J Kruse,&nbsp;A Kubátová,&nbsp;V Kučera,&nbsp;I Kučerová,&nbsp;I Kušan,&nbsp;H B Lee,&nbsp;G Levicán,&nbsp;A Lewis,&nbsp;N V Liem,&nbsp;K Liimatainen,&nbsp;H J Lim,&nbsp;M N Lyons,&nbsp;J G Maciá-Vicente,&nbsp;V Magaña-Dueñas,&nbsp;R Mahiques,&nbsp;E F Malysheva,&nbsp;P A S Marbach,&nbsp;P Marinho,&nbsp;N Matočec,&nbsp;A R McTaggart,&nbsp;A Mešić,&nbsp;L Morin,&nbsp;J M Muñoz-Mohedano,&nbsp;A Navarro-Ródenas,&nbsp;C P Nicolli,&nbsp;R L Oliveira,&nbsp;E Otsing,&nbsp;C L Ovrebo,&nbsp;T A Pankratov,&nbsp;A Paños,&nbsp;A Paz-Conde,&nbsp;A Pérez-Sierra,&nbsp;C Phosri,&nbsp;Á Pintos,&nbsp;A Pošta,&nbsp;S Prencipe,&nbsp;E Rubio,&nbsp;A Saitta,&nbsp;L S Sales,&nbsp;L Sanhueza,&nbsp;L A Shuttleworth,&nbsp;J Smith,&nbsp;M E Smith,&nbsp;D Spadaro,&nbsp;M Spetik,&nbsp;M Sochor,&nbsp;Z Sochorová,&nbsp;J O Sousa,&nbsp;N Suwannasai,&nbsp;L Tedersoo,&nbsp;H M Thanh,&nbsp;L D Thao,&nbsp;Z Tkalčec,&nbsp;N Vaghefi,&nbsp;A S Venzhik,&nbsp;A Verbeken,&nbsp;A Vizzini,&nbsp;S Voyron,&nbsp;M Wainhouse,&nbsp;A J S Whalley,&nbsp;M Wrzosek,&nbsp;M Zapata,&nbsp;I Zeil-Rolfe,&nbsp;J Z Groenewald","doi":"10.3767/persoonia.2020.44.11","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.11","url":null,"abstract":"&lt;p&gt;&lt;p&gt;Novel species of fungi described in this study include those from various countries as follows: &lt;b&gt;Antarctica&lt;/b&gt;, &lt;i&gt;Cladosporium arenosum&lt;/i&gt; from marine sediment sand. &lt;b&gt;Argentina&lt;/b&gt;, &lt;i&gt;Kosmimatamyces alatophylus&lt;/i&gt; (incl. &lt;i&gt;Kosmimatamyces&lt;/i&gt; gen. nov.) from soil. &lt;b&gt;Australia&lt;/b&gt;, &lt;i&gt;Aspergillus banksianus&lt;/i&gt;, &lt;i&gt;Aspergillus kumbius&lt;/i&gt;, &lt;i&gt;Aspergillus luteorubrus&lt;/i&gt;, &lt;i&gt;Aspergillus malvicolor&lt;/i&gt; and &lt;i&gt;Aspergillus nanangensis&lt;/i&gt; from soil, &lt;i&gt;Erysiphe medicaginis&lt;/i&gt; from leaves of &lt;i&gt;Medicago polymorpha&lt;/i&gt;, &lt;i&gt;Hymenotorrendiella communis&lt;/i&gt; on leaf litter of &lt;i&gt;Eucalyptus bicostata&lt;/i&gt;, &lt;i&gt;Lactifluus albopicri&lt;/i&gt; and &lt;i&gt;Lactifluus austropiperatus&lt;/i&gt; on soil, &lt;i&gt;Macalpinomyces collinsiae&lt;/i&gt; on &lt;i&gt;Eriachne benthamii&lt;/i&gt;, &lt;i&gt;Marasmius vagus&lt;/i&gt; on soil, &lt;i&gt;Microdochium dawsoniorum&lt;/i&gt; from leaves of &lt;i&gt;Sporobolus natalensis&lt;/i&gt;, &lt;i&gt;Neopestalotiopsis nebuloides&lt;/i&gt; from leaves of &lt;i&gt;Sporobolus elongatus&lt;/i&gt;, &lt;i&gt;Pestalotiopsis etonensis&lt;/i&gt; from leaves of &lt;i&gt;Sporobolus jacquemontii&lt;/i&gt;, &lt;i&gt;Phytophthora personensis&lt;/i&gt; from soil associated with dying &lt;i&gt;Grevillea mccutcheonii.&lt;/i&gt; &lt;b&gt;Brazil&lt;/b&gt;, &lt;i&gt;Aspergillus oxumiae&lt;/i&gt; from soil, &lt;i&gt;Calvatia baixaverdensis&lt;/i&gt; on soil, &lt;i&gt;Geastrum calycicoriaceum&lt;/i&gt; on leaf litter, &lt;i&gt;Greeneria kielmeyerae&lt;/i&gt; on leaf spots of &lt;i&gt;Kielmeyera coriacea&lt;/i&gt;. &lt;b&gt;Chile&lt;/b&gt;, &lt;i&gt;Phytophthora aysenensis&lt;/i&gt; on collar rot and stem of &lt;i&gt;Aristotelia chilensis.&lt;/i&gt; &lt;b&gt;Croatia&lt;/b&gt;, &lt;i&gt;Mollisia gibbospora&lt;/i&gt; on fallen branch of &lt;i&gt;Fagus sylvatica.&lt;/i&gt; &lt;b&gt;Czech Republic&lt;/b&gt;, &lt;i&gt;Neosetophoma hnaniceana&lt;/i&gt; from &lt;i&gt;Buxus sempervirens.&lt;/i&gt; &lt;b&gt;Ecuador&lt;/b&gt;, &lt;i&gt;Exophiala frigidotolerans&lt;/i&gt; from soil. &lt;b&gt;Estonia&lt;/b&gt;, &lt;i&gt;Elaphomyces bucholtzii&lt;/i&gt; in soil. &lt;b&gt;France&lt;/b&gt;, &lt;i&gt;Venturia paralias&lt;/i&gt; from leaves of &lt;i&gt;Euphorbia paralias.&lt;/i&gt; &lt;b&gt;India&lt;/b&gt;, &lt;i&gt;Cortinarius balteatoindicus&lt;/i&gt; and &lt;i&gt;Cortinarius ulkhagarhiensis&lt;/i&gt; on leaf litter. &lt;b&gt;Indonesia&lt;/b&gt;, &lt;i&gt;Hymenotorrendiella indonesiana&lt;/i&gt; on &lt;i&gt;Eucalyptus urophylla&lt;/i&gt; leaf litter. &lt;b&gt;Italy&lt;/b&gt;, &lt;i&gt;Penicillium taurinense&lt;/i&gt; from indoor chestnut mill. &lt;b&gt;Malaysia&lt;/b&gt;, &lt;i&gt;Hemileucoglossum kelabitense&lt;/i&gt; on soil, &lt;i&gt;Satchmopsis pini&lt;/i&gt; on dead needles of &lt;i&gt;Pinus tecunumanii.&lt;/i&gt; &lt;b&gt;Poland&lt;/b&gt;, &lt;i&gt;Lecanicillium praecognitum&lt;/i&gt; on insects' frass. &lt;b&gt;Portugal&lt;/b&gt;, &lt;i&gt;Neodevriesia aestuarina&lt;/i&gt; from saline water. &lt;b&gt;Republic of Korea&lt;/b&gt;, &lt;i&gt;Gongronella namwonensis&lt;/i&gt; from freshwater. &lt;b&gt;Russia&lt;/b&gt;, &lt;i&gt;Candida pellucida&lt;/i&gt; from &lt;i&gt;Exomias pellucidus&lt;/i&gt;, &lt;i&gt;Heterocephalacria septentrionalis&lt;/i&gt; as endophyte from &lt;i&gt;Cladonia rangiferina&lt;/i&gt;, &lt;i&gt;Vishniacozyma phoenicis&lt;/i&gt; from dates fruit, &lt;i&gt;Volvariella paludosa&lt;/i&gt; from swamp. &lt;b&gt;Slovenia&lt;/b&gt;, &lt;i&gt;Mallocybe crassivelata&lt;/i&gt; on soil. &lt;b&gt;South Africa&lt;/b&gt;, &lt;i&gt;Beltraniella podocarpi&lt;/i&gt;, &lt;i&gt;Hamatocanthoscypha podocarpi&lt;/i&gt;, &lt;i&gt;Coleophoma podocarpi&lt;/i&gt; and &lt;i&gt;Nothoseiridium podocarpi&lt;/i&gt; (incl. &lt;i&gt;Nothoseiridium&lt;/i&gt; gen. nov.) from leaves of &lt;i&gt;Podocarpus latifolius&lt;/i&gt;, &lt;i&gt;Gyrothrix encephalarti&lt;/i&gt; from le","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"301-459"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.11","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38634878","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 76
Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species. 球藻科球藻菌的系统发育与种界,以亚洲种为重点。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2019-12-16 DOI: 10.3767/persoonia.2020.44.05
L H Han, G Wu, E Horak, R E Halling, J Xu, E S T Ndolo, H Sato, N Fechner, Y P Sharma, Z L Yang
{"title":"Phylogeny and species delimitation of <i>Strobilomyces</i> (<i>Boletaceae</i>), with an emphasis on the Asian species.","authors":"L H Han,&nbsp;G Wu,&nbsp;E Horak,&nbsp;R E Halling,&nbsp;J Xu,&nbsp;E S T Ndolo,&nbsp;H Sato,&nbsp;N Fechner,&nbsp;Y P Sharma,&nbsp;Z L Yang","doi":"10.3767/persoonia.2020.44.05","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.05","url":null,"abstract":"<p><p><i>Strobilomyces</i> is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of <i>Strobilomyces</i> was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (<i>RPB</i>1 and <i>RPB</i>2); the translation elongation factor subunit 1-α (<i>TEF</i>1); and the mitochondrial cytochrome oxidase subunit 3 (<i>COX</i>3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. <i>Strobilomyces</i> and sect. <i>Echinati</i>. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of <i>Strobilomyces</i>. Our comparisons suggest that, there are a total of 31 distinct species, while <i>S. sanmingensis, S. verruculosus</i>, <i>S. subnigricans</i>, and <i>S. zangii</i>/<i>S. areolatus</i>, are synonyms of <i>S. mirandus</i>, <i>S. giganteus</i>, <i>S. alpinus</i> and <i>S. seminudus</i>, respectively. Eight new species, namely, <i>S. albidus</i>, <i>S. anthracinus</i>, <i>S. calidus</i>, <i>S. cingulatus</i>, <i>S. densisquamosus</i>, <i>S. douformis</i>, <i>S. microreticulatus</i> and <i>S. pinophilus</i>, are described. A dichotomous key to the Asian <i>Strobilomyces</i> species is provided.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"113-139"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.05","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 11
Fungal pathogens occurring on Orthopterida in Thailand. 泰国直翅目真菌病原体。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2020-02-19 DOI: 10.3767/persoonia.2020.44.06
D Thanakitpipattana, K Tasanathai, S Mongkolsamrit, A Khonsanit, S Lamlertthon, J J Luangsa-Ard
{"title":"Fungal pathogens occurring on <i>Orthopterida</i> in Thailand.","authors":"D Thanakitpipattana,&nbsp;K Tasanathai,&nbsp;S Mongkolsamrit,&nbsp;A Khonsanit,&nbsp;S Lamlertthon,&nbsp;J J Luangsa-Ard","doi":"10.3767/persoonia.2020.44.06","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.06","url":null,"abstract":"<p><p>Two new fungal genera and six species occurring on insects in the orders Orthoptera and Phasmatodea (superorder Orthopterida) were discovered that are distributed across three families in the <i>Hypocreales</i>. Sixty-seven sequences generated in this study were used in a multi-locus phylogenetic study comprising SSU, LSU, <i>TEF</i>, <i>RPB1</i> and <i>RPB2</i> together with the nuclear intergenic region (IGR). These new taxa are introduced as <i>Metarhizium gryllidicola</i>, <i>M. phasmatodeae</i>, <i>Neotorrubiella chinghridicola</i>, <i>Ophiocordyceps kobayasii</i>, <i>O. krachonicola</i> and <i>Petchia siamensis</i>. <i>Petchia siamensis</i> shows resemblance to <i>Cordyceps mantidicola</i> by infecting egg cases (ootheca) of praying mantis (Mantidae) and having obovoid perithecial heads but differs in the size of its perithecia and ascospore shape. Two new species in the <i>Metarhizium</i> cluster belonging to the <i>M. anisopliae</i> complex are described that differ from known species with respect to phialide size, conidia and host. <i>Neotorrubiella chinghridicola</i> resembles <i>Torrubiella</i> in the absence of a stipe and can be distinguished by the production of whole ascospores, which are not commonly found in <i>Torrubiella</i> (except in <i>Torrubiella hemipterigena</i>, which produces multiseptate, whole ascospores)<i>. Ophiocordyceps krachonicola</i> is pathogenic to mole crickets and shows resemblance to <i>O. nigrella</i>, <i>O. ravenelii</i> and <i>O. barnesii</i> in having darkly pigmented stromata. <i>Ophiocordyceps kobayasii</i> occurs on small crickets, and is the phylogenetic sister species of taxa in the 'sphecocephala' clade.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"140-160"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.06","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538555","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 18
Fenestelloid clades of the Cucurbitariaceae. 葫芦科的类Fenestelloid分支。
IF 9.5 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2019-05-27 DOI: 10.3767/persoonia.2020.44.01
W M Jaklitsch, H Voglmayr
{"title":"Fenestelloid clades of the <i>Cucurbitariaceae</i>.","authors":"W M Jaklitsch, H Voglmayr","doi":"10.3767/persoonia.2020.44.01","DOIUrl":"10.3767/persoonia.2020.44.01","url":null,"abstract":"<p><p>Fresh collections and their ascospore and conidial isolates backed up by type studies and molecular phylogenetic analyses of a multigene matrix of partial nuSSU-, complete ITS, partial LSU rDNA, <i>rpb2</i>, <i>tef1</i> and <i>tub2</i> sequences were used to evaluate the boundaries and species composition of <i>Fenestella</i> and related genera of the <i>Cucurbitariaceae</i>. Eight species, of which five are new, are recognised in <i>Fenestella</i> s.str., 13 in <i>Parafenestella</i> with eight new species and two in the new genus <i>Synfenestella</i> with one new species. <i>Cucurbitaria crataegi</i> is combined in <i>Fenestella</i>, <i>C. sorbi</i> in <i>Synfenestella</i>, <i>Fenestella faberi</i> and <i>Thyridium salicis</i> in <i>Parafenestella</i>. <i>Cucurbitaria subcaespitosa</i> is distinct from <i>C. sorbi</i> and combined in <i>Neocucurbitaria</i>. <i>Fenestella minor</i> is a synonym of <i>Valsa tetratrupha</i>, which is combined in <i>Parafenestella</i>. <i>Cucurbitaria marchica</i> is synonymous with <i>Parafenestella salicis</i>, <i>Fenestella bavarica</i> with <i>S. sorbi</i>, <i>F. macrospora</i> with <i>F. media</i>, and <i>P. mackenziei</i> is synonymous with <i>P. faberi</i>, and the latter is lectotypified. <i>Cucurbitaria sorbi</i>, <i>C. subcaespitosa</i> and <i>Fenestella macrospora</i> are lecto- and epitypified, <i>Cucurbitaria crataegi</i>, <i>Fenestella media</i>, <i>F. minor</i> and <i>Valsa tetratrupha</i> are epitypified in order to stabilise the names in their phylogenetic positions. A neotype is proposed for <i>Thyridium salicis</i>. A determinative key to species is given. Asexual morphs of fenestelloid fungi are phoma-like and do not differ from those of other representatives of the <i>Cucurbitariaceae</i>. The phylogenetic structure of the fenestelloid clades is complex and can only be resolved at the species level by protein-coding genes, such as <i>rpb2</i>, <i>tef1</i> and <i>tub2</i>. All fungal species studied here occur, as far as has been possible to determine, on members of <i>Diaporthales</i>, most frequently on asexual and sexual morphs of <i>Cytospora</i>.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"1-40"},"PeriodicalIF":9.5,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/b7/f2/per-2020-44-1.PMC7567968.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38540243","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phylogeny and character evolution in the Dacrymycetes, and systematics of Unilacrymaceae and Dacryonaemataceae fam. nov. Dacrymycetes 的系统发育和特征演化,以及 Unilacrymaceae 和 Dacryonaemataceae fam.
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2020-04-24 DOI: 10.3767/persoonia.2020.44.07
J C Zamora, S Ekman
{"title":"Phylogeny and character evolution in the <i>Dacrymycetes</i>, and systematics of <i>Unilacrymaceae</i> and <i>Dacryonaemataceae</i> fam. nov.","authors":"J C Zamora, S Ekman","doi":"10.3767/persoonia.2020.44.07","DOIUrl":"10.3767/persoonia.2020.44.07","url":null,"abstract":"<p><p>We present a multilocus phylogeny of the class <i>Dacrymycetes</i>, based on data from the 18S, ITS, 28S, <i>RPB1</i>, <i>RPB2</i>, <i>TEF-1α</i>, 12S, and <i>ATP6</i> DNA regions, with c. 90 species including the types of most currently accepted genera. A variety of methodological approaches was used to infer phylogenetic relationships among the <i>Dacrymycetes</i>, from a supermatrix strategy using maximum likelihood and Bayesian inference on a concatenated dataset, to coalescence-based calculations, such as quartet-based summary methods of independent single-locus trees, and Bayesian integration of single-locus trees into a species tree under the multispecies coalescent. We evaluate for the first time the taxonomic usefulness of some cytological phenotypic characters, i.e., vacuolar contents (vacuolar bodies and lipid bodies), number of nuclei of recently discharged basidiospores, and pigments, with especial emphasis on carotenoids. These characters, along with several others traditionally used for the taxonomy of this group (basidium shape, presence and morphology of clamp connections, morphology of the terminal cells of cortical/marginal hyphae, presence and degree of ramification of the hyphidia), are mapped on the resulting phylogenies and their evolution through the class <i>Dacrymycetes</i> discussed. Our analyses reveal five lineages that putatively represent five different families, four of which are accepted and named. Three out of these four lineages correspond to previously circumscribed and published families (<i>Cerinomycetaceae</i>, <i>Dacrymycetaceae</i>, and <i>Unilacrymaceae</i>), and one is proposed as the new family <i>Dacryonaemataceae</i>. Provisionally, only a single order, <i>Dacrymycetales</i>, is accepted within the class. Furthermore, the systematics of the two smallest families, <i>Dacryonaemataceae</i> and <i>Unilacrymaceae</i>, are investigated to the species level, using coalescence-based species delimitation on multilocus DNA data, and a detailed morphological study including morphometric analyses of the basidiospores. Three species are accepted in <i>Dacryonaema</i>, the type, <i>Da. rufum</i>, the newly combined <i>Da. macnabbii</i> (basionym <i>Dacrymyces macnabbii</i>), and a new species named <i>Da. macrosporum</i>. Two species are accepted in <i>Unilacryma</i>, the new <i>U. bispora</i>, and the type, <i>U. unispora</i>, the latter treated in a broad sense pending improved sampling across the Holarctic.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"161-205"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/5d/ea/per-2020-44-7.PMC7567964.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538556","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Lactifluus (Russulaceae) diversity in Central America and the Caribbean: melting pot between realms. 中美洲和加勒比地区的乳香属(Russulaceae)多样性:不同领域之间的大熔炉。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2020-06-12 DOI: 10.3767/persoonia.2020.44.10
L Delgat, R Courtecuisse, E De Crop, F Hampe, T A Hofmann, C Manz, M Piepenbring, M Roy, A Verbeken
{"title":"<i>Lactifluus</i> (<i>Russulaceae</i>) diversity in Central America and the Caribbean: melting pot between realms.","authors":"L Delgat,&nbsp;R Courtecuisse,&nbsp;E De Crop,&nbsp;F Hampe,&nbsp;T A Hofmann,&nbsp;C Manz,&nbsp;M Piepenbring,&nbsp;M Roy,&nbsp;A Verbeken","doi":"10.3767/persoonia.2020.44.10","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.10","url":null,"abstract":"<p><p>Species of the ectomycorrhizal genus <i>Lactifluus</i>, and often entire sections, are typically unique to a single continent. Given these biogeographic patterns, an interesting region to study their diversity is Central America and the Caribbean, since the region is closely connected to and often considered a part of the North American continent, but biogeographically belong to the Neotropical realm, and comprises several regions with different geologic histories. Based on a multi-gene phylogeny and morphological study, this study shows that Central America, Mexico and the Caribbean harbour at least 35 <i>Lactifluus</i> species, of which 33 were never reported outside of this region. It was found that species from the Caribbean generally show affinities to South American taxa, while species from the Central American mainland generally show affinities to Northern hemispheric taxa. We hypothesise that host specificity and/or climate play a crucial role in these different origins of diversity. Because of these different affinities, Caribbean islands harbour a completely different <i>Lactifluus</i> diversity than the Central American mainland. The majority of species occurring on the islands can be considered endemic to certain islands or island groups. In this paper, detailed morphological descriptions are given, with a focus on the unique diversity of the islands, and identification keys to all hitherto described <i>Lactifluus</i> species occurring in Central America and the Caribbean are provided. One new section, <i>Lactifluus</i> sect. <i>Nebulosi</i>, and three new species, <i>Lactifluus guadeloupensis</i>, <i>Lactifluus lepus</i> and <i>Lactifluus marmoratus</i> are described.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"278-300"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.10","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538559","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 6
A morphological and phylogenetic evaluation of Marasmius sect. Globulares (Globulares-Sicci complex) with nine new taxa from the Neotropical Atlantic Forest. 新热带大西洋森林Globulares (Globulares- sicci复合体)9个新分类群的形态学和系统发育评价。
IF 9.1 1区 生物学
Persoonia Pub Date : 2020-06-01 Epub Date: 2020-06-11 DOI: 10.3767/persoonia.2020.44.09
J J S Oliveira, J-M Moncalvo, S Margaritescu, M Capelari
{"title":"A morphological and phylogenetic evaluation of <i>Marasmius</i> sect. <i>Globulares</i> (Globulares-Sicci complex) with nine new taxa from the Neotropical Atlantic Forest.","authors":"J J S Oliveira,&nbsp;J-M Moncalvo,&nbsp;S Margaritescu,&nbsp;M Capelari","doi":"10.3767/persoonia.2020.44.09","DOIUrl":"https://doi.org/10.3767/persoonia.2020.44.09","url":null,"abstract":"<p><p>The largest and most recently emended <i>Marasmius</i> sect. <i>Globulares</i> (Globulares-Sicci complex) has increased in number of species annually while its infrasectional organization remains inconclusive. During forays in remnants of the Atlantic Rainforest in Brazil, 24 taxa of <i>Marasmius</i> belonging to sect. <i>Globulares</i> were collected from which nine are herein proposed as new: <i>Marasmius altoribeirensis</i>, <i>M. ambicellularis</i>, <i>M. hobbitii</i>, <i>M. luteoolivaceus</i>, <i>M. neotropicalis</i>, <i>M. pallidibrunneus</i>, <i>M. pseudoniveoaffinis</i>, <i>M. rhabarbarinoides</i> and <i>M. venatifolius</i>. We took this opportunity to evaluate sect. <i>Globulares sensu</i> Antonín & Noordel. in particular, combining morphological examination and both single and multilocus phylogenetic analyses using LSU and ITS data, including Neotropical samples to a broader and more globally distributed sampling of over 200 strains. Three different approaches were developed in order to better use the genetic information via Bayesian and Maximum Likelihood analyses. The implementation of these approaches resulted in: i) the phylogenetic placement of the new and known taxa herein studied among the other taxa of a wide sampling of the section; ii) the reconstruction of improved phylogenetic trees presenting more strongly supported resolution especially from intermediate to deep nodes; iii) clearer evidence indicating that the series within sect. <i>Sicci</i> and sect. <i>Globulares</i> in the traditional concept are non-monophyletic by this more stringent evaluation; and iv) the existence of several monophyletic suprespecific groups equivalent to the stirpes of Singer - clusters of morphologically similar species. These two latter points corroborate with findings of previous studies implementing analyses with the entire genus. Based on these results, we proposed a new infrasectional classification elevating Singer's concept of stirpes to series. Thirteen new series, the emendation of three extant series and three subsections gathering these series based on the major clades are proposed.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"240-277"},"PeriodicalIF":9.1,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.09","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38538558","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 12
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