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Proteomic characterization of Pseudogymnoascus spp. isolates from polar and temperate regions. 极地和温带地区假丝酵母菌属分离物的蛋白质组特征。
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-05-01 Epub Date: 2024-03-14 DOI: 10.1080/00275514.2024.2313429
Nurlizah Abu Bakar, Benjamin Lau Yii Chung, Jerzy Smykla, Saiful Anuar Karsani, Siti Aisyah Alias
{"title":"Proteomic characterization of <i>Pseudogymnoascus</i> spp. isolates from polar and temperate regions.","authors":"Nurlizah Abu Bakar, Benjamin Lau Yii Chung, Jerzy Smykla, Saiful Anuar Karsani, Siti Aisyah Alias","doi":"10.1080/00275514.2024.2313429","DOIUrl":"10.1080/00275514.2024.2313429","url":null,"abstract":"<p><p>Proteomics has been used extensively in the field of mycology, mainly in trying to understand the complex network of protein-protein interactions that has been implicated in the molecular functions of fungi. It is also a useful tool to compare metabolic differences within a genus. Species of <i>Pseudogymnoascus</i>, a genus under the phyla Ascomycota, have been shown to play an important role in the soil environment. They have been found in both polar and temperate regions and are a known producer of many extracellular hydrolases that contribute to soil decomposition. Despite the apparent importance of <i>Pseudogymnoascus</i> spp. in the soil ecosystem, investigations into their molecular functions are still very limited. In the present study, proteomic characterization of six <i>Pseudogymnoascus</i> spp. isolated from three biogeographic regions (the Arctic, Antarctic, and temperate regions) was carried out using tandem mass spectrometry. Prior to proteomic analysis, the optimization for protein extraction was carried out. Trichloroacetic acid‑acetone‑phenol was found to be the best extraction method to be used for proteomic profiling of <i>Pseudogymnoascus</i> spp. The proteomic analysis identified 2003 proteins that were successfully mapped to the UniProtKB database. The identified proteins were clustered according to their biological processes and molecular functions. The shared proteins found in all <i>Pseudogymnoascus</i> spp. (1201 proteins) showed a significantly close relationship in their basic cellular functions, despite differences in morphological structures. Analysis of <i>Pseudogymnoascus</i> spp. proteome also identified proteins that were unique to each region. However, a high number of these proteins belonged to protein families of similar molecular functions, namely, transferases and hydrolases. Our proteomic data can be used as a reference for <i>Pseudogymnoascus</i> spp. across different global regions and a foundation for future soil ecosystem function research.</p>","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":" ","pages":"449-463"},"PeriodicalIF":2.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140131921","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Triple quadrupole liquid chromatography-mass spectrometry-mediated evaluation of vitamin D2 accumulation potential, antioxidant capacities, and total polyphenol content of white jelly mushroom (Tremella fuciformis Berk.). 三重四极杆液相色谱-质谱法评估白玉菇（Tremella fuciformis Berk.）
IF 2.6 2区 生物学
Mycologia Pub Date : 2024-05-01 Epub Date: 2024-03-15 DOI: 10.1080/00275514.2024.2313435
Marium Begum, Ratul Saikia, Siddhartha Proteem Saikia
{"title":"Triple quadrupole liquid chromatography-mass spectrometry-mediated evaluation of vitamin D<sub>2</sub> accumulation potential, antioxidant capacities, and total polyphenol content of white jelly mushroom (<i>Tremella fuciformis</i> Berk.).","authors":"Marium Begum, Ratul Saikia, Siddhartha Proteem Saikia","doi":"10.1080/00275514.2024.2313435","DOIUrl":"10.1080/00275514.2024.2313435","url":null,"abstract":"<p><p><i>Tremella fuciformis</i> Berk. (<i>TF</i>), or the white jelly mushroom, is well known for its myriad of pharmacological properties, such as immunomodulatory, anti-inflammatory, antidiabetic, antitumor, and antioxidant activities, and hypocholesterolemic and hepatoprotective effects that boost human health. Most of the studies of <i>TF</i> are concentrated on its polysaccharide (glucuronoxylomannan) composition, which is responsible for its pharmacological as well as rheological properties. It is well established that mushrooms are a great source of dietary vitamin D due to the presence of ergosterol in their cell membrane. There is a lack of published data on <i>TF</i> as a source of vitamin D<sub>2</sub>. Therefore, this study aimed to evaluate the vitamin D<sub>2</sub> composition of the fruiting bodies of <i>TF</i> using triple quadrupole liquid chromatography-mass spectrometry (LC-MS/QQQ). The results showed highest vitamin D<sub>2</sub> content (292.02 µg/g dry weight) in the sample irradiated with ultraviolet B (UVB; 310 nm) for 180 min as compared with the control group (52.47 µg/g dry weight) (<i>P</i> ≤ 0.001). The results showed higher accumulation potential of vitamin D<sub>2</sub> in <i>TF</i> as compared with published data available for other extensively studied culinary mushrooms, such as <i>Agaricus bisporus, Lentinula edodes, Pleurotus ostreatus, Cordiceps militaris</i>, and <i>Calocybe indica</i>. Moreover, the impact of UV treatment on antioxidant capacities and total polyphenol content of <i>TF</i> was also studied. The accumulation potential of vitamin D in <i>TF</i> reveals a novel commercial source for this nutrient.</p>","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":" ","pages":"464-474"},"PeriodicalIF":2.6,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140137033","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction. 更正。
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-05-01 Epub Date: 2024-04-29 DOI: 10.1080/00275514.2024.2342752
{"title":"Correction.","authors":"","doi":"10.1080/00275514.2024.2342752","DOIUrl":"10.1080/00275514.2024.2342752","url":null,"abstract":"","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":"116 3","pages":"475"},"PeriodicalIF":2.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140852228","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Three new species of Agaricus from Baiyun Mountain, Guangzhou, China. 来自中国广州白云山的三个姬松茸新种。
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-05-01 Epub Date: 2024-02-28 DOI: 10.1080/00275514.2024.2311039
Ying-Shan Liang, Xiao-Xia Huang, Zhi-Jun Lin, Dong-Lin He, Li-Hong Qiu
{"title":"Three new species of <i>Agaricus</i> from Baiyun Mountain, Guangzhou, China.","authors":"Ying-Shan Liang, Xiao-Xia Huang, Zhi-Jun Lin, Dong-Lin He, Li-Hong Qiu","doi":"10.1080/00275514.2024.2311039","DOIUrl":"10.1080/00275514.2024.2311039","url":null,"abstract":"<p><p><i>Agaricus</i> is a species-rich genus with more than 600 species around the world. In this work, three new species, <i>Agaricus cacainus, A. baiyunensis</i>, and <i>A. praeclarefibrillosus</i> are described from the specimens collected at Baiyun Mountain, Guangzhou, China, a subtropical area with a monsoon maritime climate, based on phylogenetic analyses and morphological examinations of internal transcribed spacer (ITS1-5.8S-ITS2 = ITS), D1/D2 domains of the large subunit of ribosomal DNA (28S), and a part of translation elongation factor 1-alpha (<i>TEF1</i>). <i>Agaricus cacainus</i> in <i>A</i>. sect. <i>Amoeni</i> is characterized by a parabolic to applanate, slightly depressed pileus covered with chocolate brown, appressed, triangular squamules against white background, a white, furfuraceous stipe, an unchanging context when cut, a fragile and evanescent annulus, usually 4- or 2-spored basidia, and mostly pyriform cheilocystidia. <i>Agaricus baiyunensis</i> in <i>A</i>. sect. <i>Minores</i> has a pileus with a slightly truncate top covered with light brown, downy-wooly fibrillose scales and a light yellowish stipe with membranous annulus. <i>Agaricus praeclarefibrillosus</i> in <i>A</i>. sect. <i>Brunneopicti</i> is characterized by a pileus surface with brownish, triangular, recurved scales and longitudinally splitting lines toward margin, a cottony stipe with white, tiny, recurved fibrils, a single annulus, and variously shaped cheilocystidia, with sparsely ornamented basidiospores. The detailed comparison of their morphological characteristics with closely related species is provided.</p>","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":" ","pages":"431-448"},"PeriodicalIF":2.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139990633","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Martha Jane Powell, 27 January 1948–20 June 2023: Distinguished chytrid taxonomist and mentor 玛莎-简-鲍威尔（Martha Jane Powell），1948 年 1 月 27 日-2023 年 6 月 20 日：杰出的糜烂病分类学家和导师
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-04-16 DOI: 10.1080/00275514.2024.2335863
William J. Davis
{"title":"Martha Jane Powell, 27 January 1948–20 June 2023: Distinguished chytrid taxonomist and mentor","authors":"William J. Davis","doi":"10.1080/00275514.2024.2335863","DOIUrl":"https://doi.org/10.1080/00275514.2024.2335863","url":null,"abstract":"Published in Mycologia (Ahead of Print, 2024)","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":"30 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140609506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Agaricus subgenus Pseudochitonia in Malakand, Pakistan: An updated phylogeny and description of three new species 巴基斯坦马拉坎德的姬松茸亚属：更新的系统发育和三个新物种的描述
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-04-15 DOI: 10.1080/00275514.2024.2334473
Rab Nawaz, Waheed Murad, Muhammad Irshad, Philippe Callac, Shah Hussain
{"title":"Agaricus subgenus Pseudochitonia in Malakand, Pakistan: An updated phylogeny and description of three new species","authors":"Rab Nawaz, Waheed Murad, Muhammad Irshad, Philippe Callac, Shah Hussain","doi":"10.1080/00275514.2024.2334473","DOIUrl":"https://doi.org/10.1080/00275514.2024.2334473","url":null,"abstract":"Agaricus is a genus with more than 500 species. Most of the new species reported since 2000 are tropical or subtropical. The study area, the Malakand region, located in the north of Pakistan, has a...","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":"48 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140572519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evolutionary dependence of host type and chasmothecial appendage morphology in obligate plant parasites belonging to Erysipheae (powdery mildew, Erysiphaceae) 属于白粉菌科（Erysiphaceae）的强制性植物寄生虫的寄主类型和鞘膜附属物形态的进化依赖性
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-04-12 DOI: 10.1080/00275514.2024.2327972
Takashi Shirouzu, Takao K. Suzuki, Shunsuke Matsuoka, Susumu Takamatsu
{"title":"Evolutionary dependence of host type and chasmothecial appendage morphology in obligate plant parasites belonging to Erysipheae (powdery mildew, Erysiphaceae)","authors":"Takashi Shirouzu, Takao K. Suzuki, Shunsuke Matsuoka, Susumu Takamatsu","doi":"10.1080/00275514.2024.2327972","DOIUrl":"https://doi.org/10.1080/00275514.2024.2327972","url":null,"abstract":"Evolutionary relationships between the morphological and ecological traits of fungi are poorly understood. The appendages of chasmothecia, which are sexual reproductive organs of Erysiphaceae, are ...","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":"241 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140572508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Purification of andibenin and a chromanone analogue from rhizospheric Aspergillus flavus and soil-borne Penicillium notatum exhibiting cytotoxic and antibacterial properties 从根瘤黄曲霉和土生青霉中纯化出具有细胞毒性和抗菌特性的安替比林和一种色烷酮类似物
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-04-04 DOI: 10.1080/00275514.2024.2324620
Saeed Ullah Khattak, Zafar Iqbal, Jamshaid Ahmad, Yanbin Shi, Irshad Ur Rehman
{"title":"Purification of andibenin and a chromanone analogue from rhizospheric Aspergillus flavus and soil-borne Penicillium notatum exhibiting cytotoxic and antibacterial properties","authors":"Saeed Ullah Khattak, Zafar Iqbal, Jamshaid Ahmad, Yanbin Shi, Irshad Ur Rehman","doi":"10.1080/00275514.2024.2324620","DOIUrl":"https://doi.org/10.1080/00275514.2024.2324620","url":null,"abstract":"The discovery of bioactive compounds from fungal natural sources holds immense potential for the development of novel therapeutics. The present study investigates the extracts of soil-borne Penicil...","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":"45 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140572511","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Factors affecting composition of fatty acids in wild-growing forest mushrooms 影响野生林菇脂肪酸组成的因素
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-04-04 DOI: 10.1080/00275514.2024.2325045
Katarzyna Stojek, Barbara Bobrowska-Korczak, Barbara Kusińska, Małgorzata Czerwonka, Julien Decruyenaere, Lucas Decock, Johanna Klama, Sandra Mueller, Quentin Ponette, Michael Scherer-Lorenzen, Kris Verheyen, Bogdan Jaroszewicz
{"title":"Factors affecting composition of fatty acids in wild-growing forest mushrooms","authors":"Katarzyna Stojek, Barbara Bobrowska-Korczak, Barbara Kusińska, Małgorzata Czerwonka, Julien Decruyenaere, Lucas Decock, Johanna Klama, Sandra Mueller, Quentin Ponette, Michael Scherer-Lorenzen, Kris Verheyen, Bogdan Jaroszewicz","doi":"10.1080/00275514.2024.2325045","DOIUrl":"https://doi.org/10.1080/00275514.2024.2325045","url":null,"abstract":"The importance of mushrooms as a food source is continually increasing. To investigate how environmental factors affect the nutritional value of mushrooms, we harvested them in eastern Poland, sout...","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":"144 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140573049","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Arcyria similaris: A new myxomycete species from China Arcyria similaris：来自中国的一个新菌种
IF 2.8 2区 生物学
Mycologia Pub Date : 2024-03-05 DOI: 10.1080/00275514.2024.2312077
Wen-Long Song, Shuang-Lin Chen
{"title":"Arcyria similaris: A new myxomycete species from China","authors":"Wen-Long Song, Shuang-Lin Chen","doi":"10.1080/00275514.2024.2312077","DOIUrl":"https://doi.org/10.1080/00275514.2024.2312077","url":null,"abstract":"A new myxomycete species, Arcyria similaris, was reported herein. The specimens were found and collected in the field on dead bark from Jingangtai National Geopark in Henan Province of China. This ...","PeriodicalId":18779,"journal":{"name":"Mycologia","volume":"63 1","pages":""},"PeriodicalIF":2.8,"publicationDate":"2024-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140033895","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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