Methods and Applications in Fluorescence最新文献

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Development and validation of synchronous spectrofluorimetric method for the simultaneous determination of duvelisib and moxifloxacin: greenness metric assessment and application to a pharmacokinetic study in rats. 同步荧光光谱法同时测定杜维力和莫西沙星的开发与验证:绿色度量评估及在大鼠药代动力学研究中的应用。
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-12-13 DOI: 10.1088/2050-6120/ad1249
Weam M Othman, Nourah Z Al-Zoman, Ibrahim A Darwish, Aliyah Almomen, Nehal F Farid, Fatma F Abdallah, Samah S Saad
{"title":"Development and validation of synchronous spectrofluorimetric method for the simultaneous determination of duvelisib and moxifloxacin: greenness metric assessment and application to a pharmacokinetic study in rats.","authors":"Weam M Othman, Nourah Z Al-Zoman, Ibrahim A Darwish, Aliyah Almomen, Nehal F Farid, Fatma F Abdallah, Samah S Saad","doi":"10.1088/2050-6120/ad1249","DOIUrl":"10.1088/2050-6120/ad1249","url":null,"abstract":"<p><p>Duvelisib (DUV) is a potent anticancer drug whereas Moxifloxacin (MOX) is an antimicrobial drug with anti-proliferative potency against cancerous cells, which is empirically administered in cancer treatment. DUV and MOX combination is commonly prescribed to combat infections in patients while they are under chemotherapy treatment. This study describes, for the first time, the development of a simple and green synchronous spectrofluorimetric (SSF) method for the simultaneous estimation of DUV and MOX in plasma. DUV and MOX were quantified at 273 and 362 nm, respectively without interference between each other at Δ<i>λ</i>of 120 nm. The experimental variables influencing fluorescence intensities were thoroughly investigated and the optimum conditions were established. At pH 3.5, the optimum synchronous fluorescence intensity (SFI) was achieved in water solvent by using sodium acetate buffer solution. Calibration curves for DUV and MOX, correlating the SFI with the corresponding drug concentration, were linear in the range of 50-1000 ng mL<sup>-1</sup>for both drugs, with good correlation coefficients. The method was extremely sensitive, with limits of detection of 24 and 22 ng mL<sup>-1</sup>, and limits of quantitation of 40 and 45 ngmL<sup>-1</sup>for DUV and MOX, respectively. The SSF method was validated according to the Food and Drug Administration (FDA) guidelines for validation of analytical procedures, and the validation parameters were acceptable. The proposed SSF method was applied to the pharmacokinetic and bioavailability studies in rats' plasma after single concurrent oral administration of both drugs. The results of the study revealed that caution should be taken with DUV dose when concurrently administered with MOX. The greenness of SSF method was assessed by three different metric tools namely Analytical Eco-scale, Green Analytical Procedure Index, and Analytical Greenness Calculator. The results confirmed that SSF method is an eco-friendly and green analytical approach. In conclusion, the proposed SSF method is a valuable tool for pharmacokinetic/bioavailability studies and therapeutic drug monitoring of simultaneously administered DUV and MOX.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138487980","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Otto Wolfbeis 1947-2023. 奥托-沃尔夫贝斯 1947-2023
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-12-13 DOI: 10.1088/2050-6120/ad12f8
David J S Birch, Marcia Levitus, Yves Mély
{"title":"Otto Wolfbeis 1947-2023.","authors":"David J S Birch, Marcia Levitus, Yves Mély","doi":"10.1088/2050-6120/ad12f8","DOIUrl":"https://doi.org/10.1088/2050-6120/ad12f8","url":null,"abstract":"","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":"12 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138805217","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Novel fluorescence approach for trace quantification of levonorgestrel in breast milk based on click reaction with benzonitrofurazan azide (NBD-AZ). 基于苯并硝基呋喃氮叠氮(NBD-AZ)咔嗒反应的母乳中左炔诺孕酮痕量荧光定量新方法
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-12-05 DOI: 10.1088/2050-6120/ad0ee0
Heba A Aref, Ismail Salama, Shaimaa Mohamed Aboukhatwa, Mohamed A Helal, Safaa M Kishk, Mohamed Saleh Elgawish
{"title":"Novel fluorescence approach for trace quantification of levonorgestrel in breast milk based on click reaction with benzonitrofurazan azide (NBD-AZ).","authors":"Heba A Aref, Ismail Salama, Shaimaa Mohamed Aboukhatwa, Mohamed A Helal, Safaa M Kishk, Mohamed Saleh Elgawish","doi":"10.1088/2050-6120/ad0ee0","DOIUrl":"10.1088/2050-6120/ad0ee0","url":null,"abstract":"<p><p>Although the great importance of oral contraceptive agents in birth control, their existence in breast milk became a cause for concern, since infant exposure to these hormones is associated with many health problems. Consequentially, developing a sensitive bioanalytical method for monitoring their concentrations in breast milk is an urgent demand to examine the safety or the risk of these compounds on infants. Levonorgestrel is one of the most common contraceptive hormones under concern. Despite the high sensitivity of the fluorometric methods, detection of Levonorgestrel by them is confined because its structure does not exhibit any fluorescence. For the first time, we proposed a promising click fluorescent probe, 4-azido-7-nitrobenzoxadiazole to react with the alkyne group of Levonorgestrel, to give a highly fluorescent triazole derivative that exhibited strong signal at wavelength of 544 nm after excitation at 470 nm. Reaction parameters impacting the fluorescence were cautiously studied and optimized. The suggested approach has been successfully applied in Levonorgestrel estimation in breast milk samples with linearity of (0.4-80 ng.ml<sup>-1</sup>) and low detection limit of 0.12 ng.ml<sup>-1</sup>without interferences from any biological components and with mean % recovery of 97.84 ± 2.73. Accuracy, sensitivity, selectivity, simplicity, and low-cost makes this approach a convincing, promising, and appealing alternative over reported analytical methods for Levonorgestrel bioanalysis in different matrices.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138295510","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of an analytical method for the determination of pesticides in tropical fruits by LC-QTOF-MS/MS after QuEChERS extraction sample cleanup and DLLME preconcentration. 建立了QuEChERS提取、样品清洗、DLLME预富集的LC-QTOF-MS/MS分析热带水果中农药的方法。
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-11-23 DOI: 10.1088/2050-6120/ad0bfe
Sabriye Sel, Elif Öztürk Er, İkbal Koyuncu
{"title":"Development of an analytical method for the determination of pesticides in tropical fruits by LC-QTOF-MS/MS after QuEChERS extraction sample cleanup and DLLME preconcentration.","authors":"Sabriye Sel, Elif Öztürk Er, İkbal Koyuncu","doi":"10.1088/2050-6120/ad0bfe","DOIUrl":"10.1088/2050-6120/ad0bfe","url":null,"abstract":"<p><p>In this study, QuEChERS extraction was combined with dispersive liquid-liquid microextraction (DLLME) to extract pesticides from tropical fruits for determination by a highly accurate and sensitive liquid chromatography-quadrupole time-of-flight mass spectrometry (LC-QTOF-MS/MS) system. The QuEChERS method served as a matrix clean-up tool and the DLLME method preconcentrated the analytes for their determination at trace levels. All parameter variables of the DLLME method were optimized to improve the extraction output and lower the limits of detection and quantification (LOD and LOQ) for all the analytes. Under the optimum experimental conditions, the LOD and LOQ values were found in the range of 0.004-0.013 and 0.27-0.61<i>μ</i>g l<sup>-1</sup>, respectively. The detection limits achieved by direct LC-QTOF-MS/MS analysis were increased by about 10-260 folds using the optimized DLLME method. To assess the accuracy and applicability of the developed method, spike recovery experiments on tropical fruits were carried out. The matrix matching calibration method was used to enhance the quantification accuracy of the analytes in kiwi, pineapple, and mango matrices, with percent recoveries ranging between 89 and 117%.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"92155330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Analysis of the fluorescent properties of vaginal fluid upon ageing. 阴道液老化后的荧光特性分析。
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-11-09 DOI: 10.1088/2050-6120/ad06dd
Judith de Vos, Rosa E Otto, Nihad Achetib, Anas Gasser, Maurice C G Aalders, Annemieke van Dam
{"title":"Analysis of the fluorescent properties of vaginal fluid upon ageing.","authors":"Judith de Vos, Rosa E Otto, Nihad Achetib, Anas Gasser, Maurice C G Aalders, Annemieke van Dam","doi":"10.1088/2050-6120/ad06dd","DOIUrl":"10.1088/2050-6120/ad06dd","url":null,"abstract":"<p><p>Detection and identification of body fluids are crucial aspects of forensic investigations, aiding in crime scene reconstructions and providing important leads. Although many methods have been developed for these purposes, no method is currently in use in the forensic field that allows rapid, non-contact detection and identification of vaginal fluids directly at the crime scene. The development of such technique is mainly challenged by the complex chemistry of the constituents, which can differ between donors and exhibits changes based on woman's menstrual cycle. The use of fluorescence spectroscopy has shown promise in this area for other biological fluids. Therefore, the aim of this study was to identify specific fluorescent signatures of vaginal fluid with fluorescence spectroscopy to allow on-site identification. Additionally, the fluorescent properties were monitored over time to gain insight in the temporal changes of the fluorescent spectra of vaginal fluid. The samples were excited at wavelengths ranging from 200 to 600 nm and the induced fluorescence emission was measured from 220 to 700 nm. Excitation and emission maps (EEMs) were constructed for eight donors at seven time points after donation. Four distinctive fluorescence peaks could be identified in the EEMs, indicating the presence of proteins, fluorescent oxidation products (FOX), and an unidentified component as the dominant contributors to the fluorescence. To further asses the fluorescence characteristics of vaginal fluid, the fluorescent signatures of protein and FOX were used to monitor protein and lipid oxidation reactions over time. The results of this study provide insights into the intrinsic fluorescent properties of vaginal fluid over time which could be used for the development of a detection and identification method for vaginal fluids. Furthermore, the observed changes in fluorescence signatures over time could be utilized to establish an accurate ageing model.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50162147","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Paper test strip for fluorescence detection of iron ion based on nitrogen, zinc and copper codoped carbon dots. 基于氮、锌、铜共掺杂碳点的铁离子荧光检测纸试纸条。
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-11-03 DOI: 10.1088/2050-6120/ad0648
Dou Yang, Shuhan Jiang, Shuai Zhang, Xiaoyu Fan, Xiaodong Shao, Shuhao Wang, Rui Li, Qiaoli Yue
{"title":"Paper test strip for fluorescence detection of iron ion based on nitrogen, zinc and copper codoped carbon dots.","authors":"Dou Yang,&nbsp;Shuhan Jiang,&nbsp;Shuai Zhang,&nbsp;Xiaoyu Fan,&nbsp;Xiaodong Shao,&nbsp;Shuhao Wang,&nbsp;Rui Li,&nbsp;Qiaoli Yue","doi":"10.1088/2050-6120/ad0648","DOIUrl":"10.1088/2050-6120/ad0648","url":null,"abstract":"<p><p>In this study, a test strip for fluorometric analysis of iron ion (Fe<sup>3+</sup>) was constructed based on nitrogen, zinc and copper codoped carbon dots (NZC-CDs) as fluorescence probes. NZC-CDs were synthesized by hydrothermal method. The morphology, size, components, crystal state and optical properties of NZC-CDs were characterized by transmission electron microscope (TEM), Fourier-transform infrared (FT-IR), x-ray photoelectron spectroscopy (XPS), x-ray diffraction (XRD), UV-vis absorption and fluorescence spectroscopy techniques, respectively. NZC-CDs exhibited bright blue fluorescence under UV lamp with a quantum yield at 17.76%. The fluorescence of NZC-CDs was quenched by Fe<sup>3+</sup>possibly due to the static quenching. The possible fluorescence quenching mechanism was also discussed. The quenching fluorescence was linear with the concentration of Fe<sup>3+</sup>in the range of 2.5-400<i>μ</i>M with a low detection limit of 0.5<i>μ</i>M. For the convenient detection, the test strips based on filter paper were employed for Fe<sup>3+</sup>assay. Moreover, the present approach was successfully applied in the determination of Fe<sup>3+</sup>in real samples including black fungus, duck blood and pork liver. The sensing method had the potential application in more food analysis.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50158320","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of annealing on the room temperature luminescence of coumarin 106 in PVA films. 退火对香豆素106在PVA膜中室温发光的影响。
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-11-02 DOI: 10.1088/2050-6120/ad06dc
Emma Alexander, Luca Ceresa, Danh Pham, Zygmunt Gryczynski, Ignacy Gryczynski
{"title":"Effect of annealing on the room temperature luminescence of coumarin 106 in PVA films.","authors":"Emma Alexander,&nbsp;Luca Ceresa,&nbsp;Danh Pham,&nbsp;Zygmunt Gryczynski,&nbsp;Ignacy Gryczynski","doi":"10.1088/2050-6120/ad06dc","DOIUrl":"10.1088/2050-6120/ad06dc","url":null,"abstract":"<p><p>We studied the effect of annealing on the luminescence of Coumarin 106 (C106) in poly (vinyl alcohol) films (PVA films). The samples and reference polymer films were treated at temperatures between 100 °C and 150 °C (212 F and 302 F) for various times. After cooling and smoothing, the samples and references were measured at room temperature. We observed that the PVA polymer (reference films) changes its optical properties with annealing at higher temperatures, affecting the baselines in absorption and the backgrounds in emission measurements. This requires precise background subtractions and control of the signal-to-noise ratio. Whereas the fluorescence intensity of C106 in PVA films modestly decreases with annealing, the phosphorescence depends dramatically and progressively increases by many folds. The fluorescence quantum yields and lifetimes decrease with the annealing, which suggests an increase in the non-radiative processes in the singlet excited state S<sub>1</sub>. The increase in the phosphorescence intensities results from increased intersystem crossing (ISC), which also decreases fluorescence. We also studied the effect of annealing on phosphorescence with the directly excited triplet state of C106. In this case, two processes are affected by annealing, S<sub>0</sub>→T<sub>1</sub>absorption and T<sub>1</sub>→S<sub>0</sub>phosphorescence. The long-wavelength excitation (475 nm) avoids PVA polymer excitation. The phosphorescence lifetime decreases with annealing while the phosphorescence intensity increases. These changes suggest that the radiative rate of T<sub>1</sub>→ S<sub>0</sub>increases with annealing.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"50162148","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ratiometric fluorescence detection of the angiotensin-converting enzyme via single-excitation and double-emission biomass-derived carbon quantum dots. 通过单激发和双发射生物质衍生的碳量子点对血管紧张素转换酶进行定量荧光检测。
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-10-25 DOI: 10.1088/2050-6120/ad02dd
Zhihua Zhan, Huihui Mao, Mingyue Xue, Guocheng Han, Guohua Zhou, Ying Zhang
{"title":"Ratiometric fluorescence detection of the angiotensin-converting enzyme via single-excitation and double-emission biomass-derived carbon quantum dots.","authors":"Zhihua Zhan,&nbsp;Huihui Mao,&nbsp;Mingyue Xue,&nbsp;Guocheng Han,&nbsp;Guohua Zhou,&nbsp;Ying Zhang","doi":"10.1088/2050-6120/ad02dd","DOIUrl":"10.1088/2050-6120/ad02dd","url":null,"abstract":"<p><p>Efficient and rapid detection of angiotensin-converting enzyme (ACE) activity is important for preventing hypertension and the discovery of new angiotensin-converting enzyme inhibitors (ACEI). In this work, a single-excitation and double-emission biomass-derived carbon quantum dots (CQDs) was prepared and applied for ratiometric fluorescence detection of ACE. Fresh banyan leaves were extracted with ethanol and acetone, and the extracted solution was used as the precursor to produce the carbon quantum dots (BL-CQDs) with single-excitation and double-emission properties. The synthesized BL-CQDs is about 1.7 nm, has a graphene-like structure, contains a variety of hydrophilic functional groups on the surface, and has good fluorescence properties. Its fluorescence intensity ratio (I<sub>677</sub>/I<sub>460</sub>) is linear with ACE activity in the range of 0.02-0.8 U l<sup>-1</sup>. The regression equation is<i>△F</i>=2.5371<i>C</i><sub><i>ACE</i></sub>-0.0311. The method was successfully applied to the determination of ACE activity in pig lung and human serum, and the inhibitory efficiency of the flavonoid extract and captopril tablets on ACE activity was also investigated, which can be applied to the screening of ACEI. The survival rate and fluorescence imaging of Bel-7404 cells under the condition of high concentration BL-CQDs showed BL-CQDs had low cytotoxicity and good biocompatibility. These results indicate that the BL-CQDs can be used as an excellent fluorescent probe, providing a new method for screening ACE activity and plant-derived ACEI.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41205100","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A new twist on PIFE: photoisomerisation-related fluorescence enhancement. PIFE的一个新转折:与光异构化相关的荧光增强。
IF 2.4 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-10-12 DOI: 10.1088/2050-6120/acfb58
Evelyn Ploetz, Benjamin Ambrose, Anders Barth, Richard Börner, Felix Erichson, Achillefs N Kapanidis, Harold D Kim, Marcia Levitus, Timothy M Lohman, Abhishek Mazumder, David S Rueda, Fabio D Steffen, Thorben Cordes, Steven W Magennis, Eitan Lerner
{"title":"A new twist on PIFE: photoisomerisation-related fluorescence enhancement.","authors":"Evelyn Ploetz, Benjamin Ambrose, Anders Barth, Richard Börner, Felix Erichson, Achillefs N Kapanidis, Harold D Kim, Marcia Levitus, Timothy M Lohman, Abhishek Mazumder, David S Rueda, Fabio D Steffen, Thorben Cordes, Steven W Magennis, Eitan Lerner","doi":"10.1088/2050-6120/acfb58","DOIUrl":"10.1088/2050-6120/acfb58","url":null,"abstract":"<p><p>PIFE was first used as an acronym for protein-induced fluorescence enhancement, which refers to the increase in fluorescence observed upon the interaction of a fluorophore, such as a cyanine, with a protein. This fluorescence enhancement is due to changes in the rate of<i>cis</i>/<i>trans</i>photoisomerisation. It is clear now that this mechanism is generally applicable to interactions with any biomolecule. In this review, we propose that PIFE is thereby renamed according to its fundamental working principle as photoisomerisation-related fluorescence enhancement, keeping the PIFE acronym intact. We discuss the photochemistry of cyanine fluorophores, the mechanism of PIFE, its advantages and limitations, and recent approaches to turning PIFE into a quantitative assay. We provide an overview of its current applications to different biomolecules and discuss potential future uses, including the study of protein-protein interactions, protein-ligand interactions and conformational changes in biomolecules.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":2.4,"publicationDate":"2023-10-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10570931/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41134017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of MSD analysis from single particle tracking with MSD from images. Getting the best of both worlds. 来自单粒子跟踪的MSD分析与来自图像的MSD的比较。两全其美。
IF 3.2 3区 化学
Methods and Applications in Fluorescence Pub Date : 2023-10-12 DOI: 10.1088/2050-6120/acfd7e
Constanza Kettmayer, Enrico Gratton, Laura C Estrada
{"title":"Comparison of MSD analysis from single particle tracking with MSD from images. Getting the best of both worlds.","authors":"Constanza Kettmayer,&nbsp;Enrico Gratton,&nbsp;Laura C Estrada","doi":"10.1088/2050-6120/acfd7e","DOIUrl":"10.1088/2050-6120/acfd7e","url":null,"abstract":"<p><p>Fluorescence microscopy can provide valuable information about cell interior dynamics. Particularly, mean squared displacement (MSD) analysis is widely used to characterize proteins and sub-cellular structures' mobility providing the laws of molecular diffusion. The MSD curve is traditionally extracted from individual trajectories recorded by single-particle tracking-based techniques. More recently, image correlation methods like iMSD have been shown capable of providing averaged dynamic information directly from images, without the need for isolation and localization of individual particles. iMSD is a powerful technique that has been successfully applied to many different biological problems, over a wide spatial and temporal scales. The aim of this work is to review and compare these two well-established methodologies and their performance in different situations, to give an insight on how to make the most out of their unique characteristics. We show the analysis of the same datasets by the two methods. Regardless of the experimental differences in the input data for MSD or iMSD analysis, our results show that the two approaches can address equivalent questions for free diffusing systems. We focused on studying a range of diffusion coefficients between D = 0.001<i>μ</i>m<sup>2</sup>s<sup>-1</sup>and D = 0.1<i>μ</i>m<sup>2</sup>s<sup>-1</sup>, where we verified that the equivalence is maintained even for the case of isolated particles. This opens new opportunities for studying intracellular dynamics using equipment commonly available in any biophysical laboratory.</p>","PeriodicalId":18596,"journal":{"name":"Methods and Applications in Fluorescence","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2023-10-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41136166","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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