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Proceedings of the International Conference "Mathematical Biology and Bioinformatics"最新文献

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A/T tracts domination problem in the human genome 人类基因组中A/T束支配问题
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.114
V. M. Komarov, A. Samchenko, M. Kondratiev
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引用次数: 1
Mathematical modelling of the ryanodine receptor’s activation time dependence on magnesium ryanodine受体对镁的激活时间依赖性的数学建模
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.69
B. Iaparov, V. V. Ivchenko
{"title":"Mathematical modelling of the ryanodine receptor’s activation time dependence on magnesium","authors":"B. Iaparov, V. V. Ivchenko","doi":"10.17537/ICMBB18.69","DOIUrl":"https://doi.org/10.17537/ICMBB18.69","url":null,"abstract":"","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"13 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125199307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Instability Interactions of Blood Vessel 血管的不稳定性相互作用
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.16
A. Kuzin, R. A. Kuzin, S. Timerbulatov, S. A. Ulemaeva, A. G. Khakimov
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引用次数: 0
Theoretical analysis of the mechanism of microtubule rescue due to embedded GTP islands 嵌入式GTP岛微管救援机理的理论分析
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.37
А. Zaitsev, V. Mustyatsa, N. Gudimchuk
{"title":"Theoretical analysis of the mechanism of microtubule rescue due to embedded GTP islands","authors":"А. Zaitsev, V. Mustyatsa, N. Gudimchuk","doi":"10.17537/ICMBB18.37","DOIUrl":"https://doi.org/10.17537/ICMBB18.37","url":null,"abstract":"","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"51 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126580573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The study of metagenomes of oceanic microbiota 海洋微生物群宏基因组的研究
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.105
A. A. Zimin, N. Nazipova
{"title":"The study of metagenomes of oceanic microbiota","authors":"A. A. Zimin, N. Nazipova","doi":"10.17537/ICMBB18.105","DOIUrl":"https://doi.org/10.17537/ICMBB18.105","url":null,"abstract":"","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"14 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126623820","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Creation of a web server for de novo genome assembly on the basis of combining the results obtained by various assemblers 在结合不同组装者的结果的基础上，为从头基因组组装创建了一个web服务器
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.104
K. Romanenkov, G. Tyulbasheva, M. Ustinin, N. Nazipova
{"title":"Creation of a web server for de novo genome assembly on the basis of combining the results obtained by various assemblers","authors":"K. Romanenkov, G. Tyulbasheva, M. Ustinin, N. Nazipova","doi":"10.17537/ICMBB18.104","DOIUrl":"https://doi.org/10.17537/ICMBB18.104","url":null,"abstract":"","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"23 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129157562","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Models of human heart and torso electrophysiology verified against clinical data 人体心脏和躯干电生理模型与临床数据验证
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.41
K. Ushenin, A. Dokuchaev, S. Magomedova, O. Sopov, V. Kalinin, O. Solovyova
{"title":"Models of human heart and torso electrophysiology verified against clinical data","authors":"K. Ushenin, A. Dokuchaev, S. Magomedova, O. Sopov, V. Kalinin, O. Solovyova","doi":"10.17537/ICMBB18.41","DOIUrl":"https://doi.org/10.17537/ICMBB18.41","url":null,"abstract":"","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"2 12","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"113938618","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Simulation of the evolution of metabolism amplification and reduction in prokaryotes inhabiting spatially heterogeneous environments 生活在空间异质环境中的原核生物代谢扩增和减少的进化模拟
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.15
A. Klimenko, Z. S. Mustafin, S. Lashin, Y. Matushkin
{"title":"Simulation of the evolution of metabolism amplification and reduction in prokaryotes inhabiting spatially heterogeneous environments","authors":"A. Klimenko, Z. S. Mustafin, S. Lashin, Y. Matushkin","doi":"10.17537/ICMBB18.15","DOIUrl":"https://doi.org/10.17537/ICMBB18.15","url":null,"abstract":"","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"7 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116834671","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
On the optimal integration step in the numerical experiments on the charge dynamics in heterogeneous DNA 非均质DNA电荷动力学数值实验中最优积分步骤研究
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.65
M. I. Pyatkov, A. Zaytsev, M. Olshevets, N. S. Fialko
{"title":"On the optimal integration step in the numerical experiments on the charge dynamics in heterogeneous DNA","authors":"M. I. Pyatkov, A. Zaytsev, M. Olshevets, N. S. Fialko","doi":"10.17537/ICMBB18.65","DOIUrl":"https://doi.org/10.17537/ICMBB18.65","url":null,"abstract":"Процессы переноса заряда в ДНК моделируются с помощью вычислительного эксперимента. Мы рассматриваем модель, основанную на гамильтониане Холстейна в полуклассическом приближении, для учета температуры используется ланжевеновский термостат. Характерные времена квантовой и классической подсистем для модели ДНК сильно различны, на два порядка и больше. Ранее было показано, что термодинамические величины – полная энергия системы, электронная часть теплоемкости и т.п. – в термодинамически равновесном состоянии зависят не от значений коэффициентов модели, а от их соотношений. Поэтому сами величины можно рассчитывать, используя «ускоряющие» значения параметров, при которых система приходит к равновесному состоянию за сравнительно небольшое время. Ситуация меняется, если нас интересует динамика заряда в ДНК из начального состояния «заряд локализован на сайте-доноре» до термодинамического равновесия. В этом случае расчетное время может быть очень большим, и появляется вопрос о корректности моделирования. Этот вопрос мы исследовали с помощью тестовых расчетов. Проверено два метода интегрирования с искусственной нормировкой. Расчетные параметры соответствуют гуаниновым и адениновым сайтам. По результатам тестов выбран оптимальный метод для выполнения серийных расчетов и определен максимальный шаг интегрирования при значениях параметров, характерных для гетерогенных фрагментов ДНК.","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"109 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"127079034","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Defects in Hydroxyapatite: structure and properties, calculations from the first principles 羟基磷灰石的缺陷:结构和性质，从第一性原理计算
Proceedings of the International Conference "Mathematical Biology and Bioinformatics" Pub Date : 2018-11-07 DOI: 10.17537/ICMBB18.1
V. Bystrov, E. Paramonova, L. Avakyan, J. Coutinho, A. Bystrova
{"title":"Defects in Hydroxyapatite: structure and properties, calculations from the first principles","authors":"V. Bystrov, E. Paramonova, L. Avakyan, J. Coutinho, A. Bystrova","doi":"10.17537/ICMBB18.1","DOIUrl":"https://doi.org/10.17537/ICMBB18.1","url":null,"abstract":"","PeriodicalId":168323,"journal":{"name":"Proceedings of the International Conference \"Mathematical Biology and Bioinformatics\"","volume":"25 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2018-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128179889","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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