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Journal of Oral Microbiology最新文献

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Comparison of the performance of MiSeq and NovaSeq in oral microbiome study MiSeq 和 NovaSeq 在口腔微生物组研究中的性能比较
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-04-18 DOI: 10.1080/20002297.2024.2344293
Hyejung Han, Hyo-Jung Lee, Keun-Suh Kim, Jin Chung, Hee Sam Na
{"title":"Comparison of the performance of MiSeq and NovaSeq in oral microbiome study","authors":"Hyejung Han, Hyo-Jung Lee, Keun-Suh Kim, Jin Chung, Hee Sam Na","doi":"10.1080/20002297.2024.2344293","DOIUrl":"https://doi.org/10.1080/20002297.2024.2344293","url":null,"abstract":"Next generation sequencing is commonly used to characterize the microbiome structure. MiSeq is most commonly used to analyze the microbiome due to its relatively long read length. Illumina also int...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-04-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140611937","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of the unique oral microbiome of children harboring Helicobacter pylori in the oral cavity 确定口腔中幽门螺旋杆菌携带者的独特口腔微生物组的特征
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-04-11 DOI: 10.1080/20002297.2024.2339158
Yuko Ogaya, Tamami Kadota, Masakazu Hamada, Ryota Nomura, Kazuhiko Nakano
{"title":"Characterization of the unique oral microbiome of children harboring Helicobacter pylori in the oral cavity","authors":"Yuko Ogaya, Tamami Kadota, Masakazu Hamada, Ryota Nomura, Kazuhiko Nakano","doi":"10.1080/20002297.2024.2339158","DOIUrl":"https://doi.org/10.1080/20002297.2024.2339158","url":null,"abstract":"Helicobacter pylori infection is acquired in childhood via the oral cavity, although its relationship with the characteristics of the oral microbiome has not been elucidated. In this study, we perf...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"1 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140566560","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unveiling the complexity of early childhood caries: Candida albicans and Streptococcus mutans cooperative strategies in carbohydrate metabolism and virulence 揭示儿童早期龋齿的复杂性：白色念珠菌和变异链球菌在碳水化合物代谢和毒力方面的合作策略
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-04-10 DOI: 10.1080/20002297.2024.2339161
Pingping Jin, Lu Wang, Daozhen Chen, Yu Chen
{"title":"Unveiling the complexity of early childhood caries: Candida albicans and Streptococcus mutans cooperative strategies in carbohydrate metabolism and virulence","authors":"Pingping Jin, Lu Wang, Daozhen Chen, Yu Chen","doi":"10.1080/20002297.2024.2339161","DOIUrl":"https://doi.org/10.1080/20002297.2024.2339161","url":null,"abstract":"To explore the mechanisms underlying the virulence changes in early childhood caries (ECC) caused by Candida albicans (C. albicans) and Streptococcus mutans (S. mutans), with a focus on carbohydrat...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"52 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140566693","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A rare case of necrotizing fasciitis of the leg in an intravenous drug user caused by Prevotella denticola 一例罕见的静脉注射吸毒者腿部坏死性筋膜炎病例，病原菌为齿孢子菌
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-03-29 DOI: 10.1080/20002297.2024.2334545
Andrea Bedini, Filippo Medioli, Altea Gallerani, Irene Venturelli, Giacomo Franceschi, Marianna Meschiari, Erica Franceschini, Giacomo Maria Lima, Mario Sarti, Cristina Mussini
{"title":"A rare case of necrotizing fasciitis of the leg in an intravenous drug user caused by Prevotella denticola","authors":"Andrea Bedini, Filippo Medioli, Altea Gallerani, Irene Venturelli, Giacomo Franceschi, Marianna Meschiari, Erica Franceschini, Giacomo Maria Lima, Mario Sarti, Cristina Mussini","doi":"10.1080/20002297.2024.2334545","DOIUrl":"https://doi.org/10.1080/20002297.2024.2334545","url":null,"abstract":"Intravenous drug users (IDUs) have a high risk of developing skin and soft tissue infections such as erysipelas, abscesses, and less frequently necrotizing fasciitis (NF) or gas gangrene. Rarely, t...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"28 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140326004","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Role of ferroptosis in Porphyromonas gingivalis-induced impairment of epithelial junction 铁蛋白沉积在牙龈卟啉单胞菌诱发的上皮连接损伤中的作用
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-03-28 DOI: 10.1080/20002297.2024.2334578
Xiaoting Shi, Jinwen Liu, Ze Lu, Jiabo Li, Shuwei Zhang, Qian Li, Fengxue Geng, Yaping Pan
{"title":"Role of ferroptosis in Porphyromonas gingivalis-induced impairment of epithelial junction","authors":"Xiaoting Shi, Jinwen Liu, Ze Lu, Jiabo Li, Shuwei Zhang, Qian Li, Fengxue Geng, Yaping Pan","doi":"10.1080/20002297.2024.2334578","DOIUrl":"https://doi.org/10.1080/20002297.2024.2334578","url":null,"abstract":"This study aims to clarify the effect of ferroptosis by P. gingivalis on periodontal epithelium impairment and potential mechanisms.The expression of epithelial junction proteins (CDH1, OCLN, ZO-1)...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"33 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140314166","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The antimicrobial effect of different vitamin D compounds on Streptococcus mutans and their impact on glycosyltransferase expression 不同维生素 D 复合物对变异链球菌的抗菌作用及其对糖基转移酶表达的影响
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-03-27 DOI: 10.1080/20002297.2024.2327758
Marta Picolo, Abish Stephen, Aylin Baysan
{"title":"The antimicrobial effect of different vitamin D compounds on Streptococcus mutans and their impact on glycosyltransferase expression","authors":"Marta Picolo, Abish Stephen, Aylin Baysan","doi":"10.1080/20002297.2024.2327758","DOIUrl":"https://doi.org/10.1080/20002297.2024.2327758","url":null,"abstract":"Streptococcus mutans is a virulent microorganism associated with dental caries. This in vitro study aimed to investigate the antimicrobial effects of Cholecalciferol (D3) and Doxercalciferol (D2), ...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"32 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140314313","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Shotgun metagenomic analysis of the oral microbiome in gingivitis: a nested case-control study 牙龈炎患者口腔微生物组的射枪元基因组分析：巢式病例对照研究
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-03-22 DOI: 10.1080/20002297.2024.2330867
Muhammed Manzoor, Jaakko Leskelä, Milla Pietiäinen, Nicolas Martinez-Majander, Eija Könönen, Teemu Niiranen, Leo Lahti, Juha Sinisalo, Jukka Putaala, Pirkko J. Pussinen, Susanna Paju
{"title":"Shotgun metagenomic analysis of the oral microbiome in gingivitis: a nested case-control study","authors":"Muhammed Manzoor, Jaakko Leskelä, Milla Pietiäinen, Nicolas Martinez-Majander, Eija Könönen, Teemu Niiranen, Leo Lahti, Juha Sinisalo, Jukka Putaala, Pirkko J. Pussinen, Susanna Paju","doi":"10.1080/20002297.2024.2330867","DOIUrl":"https://doi.org/10.1080/20002297.2024.2330867","url":null,"abstract":"Gingivitis, i.e. inflammation of the gums, is often induced by dentalplaque. However, its exact link to the oral microbiota remains unclear.In a case-control study involving 120 participants, compr...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"122 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140197719","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Oral and gut microbial profiling in periodontitis and Parkinson’s disease 牙周炎和帕金森病的口腔和肠道微生物图谱分析
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-03-21 DOI: 10.1080/20002297.2024.2331264
Ekin Yay, Melis Yilmaz, Hilal Toygar, Nur Balci, Carla Alvarez Rivas, Basak Bolluk Kılıç, Ali Zirh, Bruce J. Paster, Alpdogan Kantarci
{"title":"Oral and gut microbial profiling in periodontitis and Parkinson’s disease","authors":"Ekin Yay, Melis Yilmaz, Hilal Toygar, Nur Balci, Carla Alvarez Rivas, Basak Bolluk Kılıç, Ali Zirh, Bruce J. Paster, Alpdogan Kantarci","doi":"10.1080/20002297.2024.2331264","DOIUrl":"https://doi.org/10.1080/20002297.2024.2331264","url":null,"abstract":"We tested the hypothesis that Parkinson’s disease (PA) alters the periodontitis-associated oral microbiome.Patients with periodontitis with Parkinson’s disease (PA+P) and without PA (P) and systemi...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"134 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-03-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140197699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic characterization of glyoxalase pathway in oral streptococci and its contribution to interbacterial competition 口腔链球菌乙醛化酶途径的遗传特征及其对细菌间竞争的贡献
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-03-03 DOI: 10.1080/20002297.2024.2322241
Lin Zeng, Payam Noeparvar, Robert A. Burne, Benjamin S. Glezer
{"title":"Genetic characterization of glyoxalase pathway in oral streptococci and its contribution to interbacterial competition","authors":"Lin Zeng, Payam Noeparvar, Robert A. Burne, Benjamin S. Glezer","doi":"10.1080/20002297.2024.2322241","DOIUrl":"https://doi.org/10.1080/20002297.2024.2322241","url":null,"abstract":"To analyze contributions to microbial ecology of Reactive Electrophile Species (RES), including methylglyoxal, generated during glycolysis.Genetic analyses were performed on the glyoxalase pathway ...","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"55 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-03-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140018960","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of pathogenic microbiome on removable prostheses with different levels of cleanliness using 2bRAD-M metagenomic sequencing. 使用 2bRAD-M 元基因组测序法分析不同清洁度的可摘义齿上的病原微生物群。
IF 4.5 2区 医学
Journal of Oral Microbiology Pub Date : 2024-02-22 eCollection Date: 2024-01-01 DOI: 10.1080/20002297.2024.2317059
Tong Wah Lim, Shi Huang, Yuesong Jiang, Yufeng Zhang, Michael Francis Burrow, Colman McGrath
{"title":"Characterization of pathogenic microbiome on removable prostheses with different levels of cleanliness using 2bRAD-M metagenomic sequencing.","authors":"Tong Wah Lim, Shi Huang, Yuesong Jiang, Yufeng Zhang, Michael Francis Burrow, Colman McGrath","doi":"10.1080/20002297.2024.2317059","DOIUrl":"10.1080/20002297.2024.2317059","url":null,"abstract":"<p><strong>Background: </strong>The microbiomes on the surface of unclean removable prostheses are complex and yet largely underexplored using metagenomic sequencing technology.</p><p><strong>Objectives: </strong>To characterize the microbiome of removable prostheses with different levels of cleanliness using Type IIB Restriction-site Associated DNA for Microbiome (2bRAD-M) sequencing and compare the Microbial Index of Pathogenic Bacteria (MIP) between clean and unclean prostheses.</p><p><strong>Materials and methods: </strong>Ninety-seven removable prostheses were classified into 'clean' and 'unclean' groups. All prosthesis plaque samples underwent 2bRAD metagenomic sequencing to characterize the species-resolved microbial composition. MIPs for clean and unclean prostheses were calculated based on the sum of the relative abundance of pathogenic bacteria in a microbiome using a reference database that contains opportunistic pathogenic bacteria and disease-associated information.</p><p><strong>Results: </strong>Beta diversity analyses based on Jaccard qualitative and Bray-Curtis quantitative distance matrices identified significant differences between the two groups (<i>p</i> < 0.05). There was a significant enrichment of many pathogenic bacteria in the unclean prosthesis group. The MIP for unclean prostheses (0.47 ± 0.25) was significantly higher than for clean prostheses (0.37 ± 0.29), <i>p</i> = 0.029.</p><p><strong>Conclusions: </strong>The microbial community of plaque samples from 'unclean' prostheses demonstrated compositional differences compared with 'clean' prostheses. In addition, the pathogenic microbiome in the 'unclean' versus 'clean' group differed.</p>","PeriodicalId":16598,"journal":{"name":"Journal of Oral Microbiology","volume":"16 1","pages":"2317059"},"PeriodicalIF":4.5,"publicationDate":"2024-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10896157/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139972248","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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