Vikhyaat Ahlawat, Anshika Dhiman, Hashini Ekanayake Mudiyanselage and Huan-Xiang Zhou*,
{"title":"Protamine-Mediated Tangles Produce Extreme Deoxyribonucleic Acid Compaction","authors":"Vikhyaat Ahlawat, Anshika Dhiman, Hashini Ekanayake Mudiyanselage and Huan-Xiang Zhou*, ","doi":"10.1021/jacs.4c1246810.1021/jacs.4c12468","DOIUrl":"https://doi.org/10.1021/jacs.4c12468https://doi.org/10.1021/jacs.4c12468","url":null,"abstract":"<p >In sperm cells, protamine replaces histones to compact DNA 10–20 times more than in somatic cells. To characterize the extreme compaction, we employed confocal microscopy and optical tweezers to determine the conformations and stability of protamine-bound λ-DNA. Confocal images show increasing compaction of λ-DNA at increasing protamine concentration. In the presence of protamine, single λ-DNA molecules form tangles that withstand forces strong enough (∼55 pN) for strand separation and shorten the contour length by up to 40% even at high forces, as well as bends and loops that rupture at 10–40 pN forces. Strand separation nucleates tangles, implicating protamine interactions with DNA bases. Molecular dynamics simulations show that Arg sidechains of protamine each form hydrogen bonds with multiple bases, frequently in the form of a wedge between the two strands of DNA. Protamine may participate in both local and higher-order chromatin organization, leading to extreme compaction and global transcription silencing.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 44","pages":"30668–30677 30668–30677"},"PeriodicalIF":14.4,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142585991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Muhammad Irfansyah Maulana, Tae Hwan Jo, Ha-Young Lee, Chaehyeon Lee, Caleb Gyan-Barimah, Cheol-Hwan Shin, Jeong-Hoon Yu, Kug-Seung Lee, Seoin Back* and Jong-Sung Yu*,
{"title":"Cobalt Nitride-Implanted PtCo Intermetallic Nanocatalysts for Ultrahigh Fuel Cell Cathode Performance","authors":"Muhammad Irfansyah Maulana, Tae Hwan Jo, Ha-Young Lee, Chaehyeon Lee, Caleb Gyan-Barimah, Cheol-Hwan Shin, Jeong-Hoon Yu, Kug-Seung Lee, Seoin Back* and Jong-Sung Yu*, ","doi":"10.1021/jacs.4c0951410.1021/jacs.4c09514","DOIUrl":"https://doi.org/10.1021/jacs.4c09514https://doi.org/10.1021/jacs.4c09514","url":null,"abstract":"<p >Stable and active oxygen reduction electrocatalysts are essential for practical fuel cells. Herein, we report a novel class of highly ordered platinum-cobalt (Pt-Co) alloys embedded with cobalt nitride. The intermetallic core–shell catalyst demonstrates an initial mass activity of 0.88 A mg<sub>Pt</sub><sup>–1</sup> at 0.9 V with 71% retention after 30,000 potential cycles of an aggressive square-wave accelerated durability test and loses only 9% of its electrochemical surface area, far exceeding the US Department of Energy 2025 targets, with unprecedented stability and only a minimal voltage loss under practical fuel cell operating conditions. We discover that regulating the atomic ordering in the core results in an optimal lattice configuration that accelerates the oxygen reduction kinetics. The presence of cobalt nitride decorated within PtCo superlattices guarantees a larger barrier to Co dissolution, leading to the excellent endurance of the electrocatalysts. This work brings up a transformative structural engineering strategy for rationally designing high-performing Pt-based catalysts with a unique atomic configuration for broad practical uses in energy conversion technology.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 45","pages":"30922–30932 30922–30932"},"PeriodicalIF":14.4,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142609176","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jinxing Chen*, Ji Feng, Panpan Xu and Yadong Yin*,
{"title":"Magnetoplasmonic Triblock Nanorods for Collective Linear Dichroism","authors":"Jinxing Chen*, Ji Feng, Panpan Xu and Yadong Yin*, ","doi":"10.1021/jacs.4c1137710.1021/jacs.4c11377","DOIUrl":"https://doi.org/10.1021/jacs.4c11377https://doi.org/10.1021/jacs.4c11377","url":null,"abstract":"<p >Polarized light detection is crucial for advancements in optical imaging, positioning, and obstacle avoidance systems. While optical nanomaterials sensitive to polarization are well-established, the ability to align these materials remains a significant challenge. Here, we introduce Au–Fe<sub>3</sub>O<sub>4</sub>–Au triblock nanorods as a novel solution. Synthesized via a space-confined seeded growth method, these magnetoplasmonic nanocomposites uniquely combine the strong polarization capabilities of Au nanorods with the magnetic alignment properties of Fe<sub>3</sub>O<sub>4</sub> nanorods. This architecture results in exceptional collective linear dichroism, achieving a polarization ratio of approximately 14 at the device level. Our nanorods exhibit high detection sensitivity and laser damage resistance, positioning them as a promising platform for developing advanced optical devices.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 45","pages":"31205–31212 31205–31212"},"PeriodicalIF":14.4,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142608663","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yuan-Yang Guo*, Ze-Hua Tian, Linghong Zhang, Yu-Chen Han, Bei-Bei Zhang, Qing Xing, Tianju Shao, Yang Liu and Zhiyong Jiang*,
{"title":"Photobiocatalytic Platform for the Efficient Enantio-Divergent Synthesis of β-Fluoromethylated Ketones","authors":"Yuan-Yang Guo*, Ze-Hua Tian, Linghong Zhang, Yu-Chen Han, Bei-Bei Zhang, Qing Xing, Tianju Shao, Yang Liu and Zhiyong Jiang*, ","doi":"10.1021/jacs.4c1044110.1021/jacs.4c10441","DOIUrl":"https://doi.org/10.1021/jacs.4c10441https://doi.org/10.1021/jacs.4c10441","url":null,"abstract":"<p >β-Fluoromethyl (CH<sub>2</sub>F, CHF<sub>2</sub>, and CF<sub>3</sub>)-substituted chiral ketones are essential moieties and are vital building blocks in pharmaceutical and agrochemistry. However, general and convenient methods for enantio-diverse access to diverse β-fluoromethylated ketones are lacking, hindering the further development of these functional moieties. In this study, we developed an ene-reductase-based photobiocatalytic platform for efficient synthesis of enantio-divergent β-fluoromethylated chiral ketones. Our method highlights substrate-type diversity, excellent enantioselectivity, enzymatic enantio-divergent synthesis, as well as a dicyanopyrazine (DPZ)-type photosensitizer for biocompatible olefin <i>E</i>/<i>Z</i> isomerization in enzymatic stereoconvergent olefin asymmetric reduction, thereby providing a general photobiocatalytic solution to diverse β-fluoromethylated chiral ketones.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 45","pages":"31012–31020 31012–31020"},"PeriodicalIF":14.4,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142609046","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A Carborane-Derived Proton-Coupled Electron Transfer Reagent","authors":"Enric H. Adillon, and , Jonas C. Peters*, ","doi":"10.1021/jacs.4c0900710.1021/jacs.4c09007","DOIUrl":"https://doi.org/10.1021/jacs.4c09007https://doi.org/10.1021/jacs.4c09007","url":null,"abstract":"<p >Reagents capable of concerted proton–electron transfer (CPET) reactions can access reaction pathways with lower reaction barriers compared to stepwise pathways involving electron transfer (ET) and proton transfer (PT). To realize reductive multielectron/proton transformations involving CPET, one approach that has shown recent promise involves coupling a cobaltocene ET site with a protonated arylamine Brønsted acid PT site. This strategy colocalizes the electron/proton in a matter compatible with a CPET step and net reductive electrocatalysis. To probe the generality of such an approach a class of C,C′-diaryl-<i>o</i>-carboranes is herein explored as a conceptual substitute for the cobaltocene subunit, with an arylamine linkage still serving as a colocalized Brønsted base suitable for protonation. The featured <i>o</i>-carborane (Ph<b>Cb</b>Ph<sup>N</sup>) can be reduced and protonated to generate an N–H bond with a weak effective bond dissociation free energy (BDFE<sub>eff</sub>) of 31 kcal/mol, estimated with measured thermodynamic data. This N–H bond is among the lowest measured element–H bonds for analyzed nonmetal compounds. Distinct solid-state crystal structures of the one- and two-electron reduced forms of diaryl-<i>o</i>-carboranes are disclosed to gain insight into their well-behaved redox characteristics. The singly reduced, protonated form of the diaryl-<i>o</i>-carborane can mediate multi-ET/PT reductions of azoarenes, diphenylfumarate, and nitrotoluene. In contrast to the aforementioned cobaltocene system, available mechanistic data disclosed herein support these reactions occurring by a rate-limiting ET step and not a CPET step. A relevant hydrogen evolution reaction (HER) reaction was also studied, with data pointing to a PT/ET/PT mechanism, where the reduced carborane core is itself highly stable to protonation.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 44","pages":"30204–30211 30204–30211"},"PeriodicalIF":14.4,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/epdf/10.1021/jacs.4c09007","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142585757","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Chang-Hun Ji, Sehong Park, Kunwoo Lee, Hyun-Woo Je and Hahk-Soo Kang*,
{"title":"Lipidation Engineering in Daptomycin Biosynthesis","authors":"Chang-Hun Ji, Sehong Park, Kunwoo Lee, Hyun-Woo Je and Hahk-Soo Kang*, ","doi":"10.1021/jacs.4c1096610.1021/jacs.4c10966","DOIUrl":"https://doi.org/10.1021/jacs.4c10966https://doi.org/10.1021/jacs.4c10966","url":null,"abstract":"<p >Lipopeptides are an important family of natural products, some of which are clinically used as antibiotics to treat multidrug-resistant pathogens. Although the lipid moieties play a crucial role in balancing antibacterial activity and hemolytic toxicity, modifying the lipid moieties has been challenging due to the complexity of the lipidation process in lipopeptide biosynthesis. Here, we show that the lipid profile can be altered by engineering both secondary and primary metabolisms, using daptomycin as an example. First, swapping the fatty acyl AMP ligase (FAAL) gene <i>dptF</i> with foreign FAAL homologs improved the fatty acyl specificity of the lipidation process for decanoic acid. Then, the introduction of <i>Mycobacterium</i> type I fatty acid synthase operon (MvFAS-Ib/MvAcpS) and <i>Cryptosporidium</i> thioesterase (CpTEII) enriched the fatty acid pool with decanoic acid in <i>Streptomyces roseosporus</i>. The engineered fatty acid metabolism eliminates the need for external decanoic acid supplementation by enabling <i>S. roseosporus</i> to biosynthesize decanoic acid. By complete engineering of the lipidation process, we achieved, for the first time, high-purity, natural production of daptomycin. The lipidation engineering approach we demonstrate here lays the foundation for the lipidation control in lipopeptide biosynthesis.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 44","pages":"30434–30442 30434–30442"},"PeriodicalIF":14.4,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142585984","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Alexander J. Grooms, Isabella M. Marcelo, Robert T. Huttner and Abraham K. Badu-Tawiah*,
{"title":"Programmable Plasma-Microdroplet Cascade Reactions for Multicomponent Systems","authors":"Alexander J. Grooms, Isabella M. Marcelo, Robert T. Huttner and Abraham K. Badu-Tawiah*, ","doi":"10.1021/jacs.4c0705310.1021/jacs.4c07053","DOIUrl":"https://doi.org/10.1021/jacs.4c07053https://doi.org/10.1021/jacs.4c07053","url":null,"abstract":"<p >The concept of programmable cascade reactions in charged microdroplets is introduced using carbon–carbon (C–C) bond formation via uncatalyzed Michael addition in a three-tier study culminating in programmable Hantzsch multicomponent, multistep reactions. In situ generated reactive oxygen species (ROS) from nonthermal plasma discharge are fused with charged water microdroplets (devoid of ROS) in real time for accelerated chemical reactions. This plasma-microdroplet fusion platform utilizing a coaxial spray configuration enabled product selection while avoiding unwanted side reactions. Hydrogen abstraction via ROS facilitated the formation of enolate anions without strong base use. Reaction enhancement factors >10<sup>3</sup> were calculated for plasma-microdroplet fusion versus microdroplet-only reactions. The platform programmability was showcased through (i) uncatalyzed 1,4-Michael addition of α,β-unsaturated carbonyls, (ii) novel C–C bond formation via the use of pro-electrophilic amine and alcohol substrates─activated through collisions in the microdroplet environment to serve as Michael acceptors, and (iii) selective Hantzsch cascade reaction with cross-coupling products, avoiding side reactions including N-alkylation and self-coupling product formation. Milligram quantity product collection is achieved, showcasing plasma-microdroplet fusion as an effective tool for preparative-scale synthesis. Thus, the controlled generation of ROS via plasma discharge during charged water microdroplet evolution establishes a green synthetic method for uncatalyzed C–C bond formation.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 44","pages":"30068–30077 30068–30077"},"PeriodicalIF":14.4,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142585941","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mingyu Xu, Yongbin Lee, Xianglin Ke, Min-Chul Kang, Matt Boswell, Sergey L. Bud’ko, Lin Zhou, Liqin Ke, Mingda Li, Paul C. Canfield* and Weiwei Xie*,
{"title":"Giant Uniaxial Magnetocrystalline Anisotropy in SmCrGe3","authors":"Mingyu Xu, Yongbin Lee, Xianglin Ke, Min-Chul Kang, Matt Boswell, Sergey L. Bud’ko, Lin Zhou, Liqin Ke, Mingda Li, Paul C. Canfield* and Weiwei Xie*, ","doi":"10.1021/jacs.4c1005610.1021/jacs.4c10056","DOIUrl":"https://doi.org/10.1021/jacs.4c10056https://doi.org/10.1021/jacs.4c10056","url":null,"abstract":"<p >Magnetic anisotropy is a crucial characteristic for enhancing the spintronic device performance. The synthesis of SmCrGe<sub>3</sub> single crystals through a high-temperature solution method has led to the determination of uniaxial magnetocrystalline anisotropy. Phase verification was achieved by using scanning transmission electron microscopy (STEM), powder, and single-crystal X-ray diffraction techniques. Electrical transport and specific heat measurements indicate a Curie temperature (<i>T</i><sub>C</sub>) of approximately 160 K, while magnetization measurements were utilized to determine the anisotropy fields and constants. Curie–Weiss fitting applied to magnetization data suggests the contribution of both Sm and Cr in the paramagnetic phase. Additionally, density functional theory (DFT) calculations explored the electronic structures and magnetic properties of SmCrGe<sub>3</sub>, revealing a significant easy-axis single-ion Sm magnetocrystalline anisotropy of 16 meV/fu. Based on the magnetization measurements, easy-axis magnetocrystalline anisotropy at 20 K is 13 meV/fu.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 44","pages":"30294–30302 30294–30302"},"PeriodicalIF":14.4,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/epdf/10.1021/jacs.4c10056","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142585953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yuan Cai, Triptesh Kumar Roy, Till J. B. Zähringer, Beatrice Lansbergen, Christoph Kerzig* and Tobias Ritter*,
{"title":"Arylthianthrenium Salts for Triplet Energy Transfer Catalysis","authors":"Yuan Cai, Triptesh Kumar Roy, Till J. B. Zähringer, Beatrice Lansbergen, Christoph Kerzig* and Tobias Ritter*, ","doi":"10.1021/jacs.4c1109910.1021/jacs.4c11099","DOIUrl":"https://doi.org/10.1021/jacs.4c11099https://doi.org/10.1021/jacs.4c11099","url":null,"abstract":"<p >Sigma bond cleavage through electronically excited states allows synthetically useful transformations with two radical species. Direct excitation of simple aryl halides to form both aryl and halogen radicals necessitates UV-C light, so undesired side reactions are often observed and specific equipment is required. Moreover, only aryl halides with extended π systems and comparatively low triplet energy are applicable to synthetically useful energy transfer catalysis. Here we show the conceptual advantages of arylthianthrenium salts (ArTTs) for energy transfer catalysis with high energy efficiency compared to conventional aryl (pseudo)halides and their utility in arylation reactions of ethylene. The fundamental advance is enabled by the low triplet energy of ArTTs that may originate in large part from the electronic interplay between the distinct sulfur atoms in the tricyclic thianthrene scaffold, which is not accessible in either simple (pseudo)halides or other conventional sulfonium salts.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 44","pages":"30474–30482 30474–30482"},"PeriodicalIF":14.4,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/epdf/10.1021/jacs.4c11099","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142585948","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Impact of Cavity Length Non-uniformity on Reaction Rate Extraction in Strong Coupling Experiments","authors":"Michael A. Michon, and , Blake S. Simpkins*, ","doi":"10.1021/jacs.4c1226910.1021/jacs.4c12269","DOIUrl":"https://doi.org/10.1021/jacs.4c12269https://doi.org/10.1021/jacs.4c12269","url":null,"abstract":"<p >Reports of altered chemical phenomena under vibrational strong coupling, including reaction rates, product distributions, intermolecular forces, and cavity-mediated vibrational energy transfer, have been met with a great deal of skepticism due to several irreproducible results and the lack of an accepted theoretical framework. In this work, we add some insight by identifying a UV–vis measurement artifact that distorts observed absorption peak positions, amplitudes, and consequently, chemical reaction rates extracted in optical microcavities. We predict and characterize the behavior of this artifact using the Transfer Matrix (TM) method and confirm its presence experimentally. We then present a correction technique whereby an effective molar absorption coefficient is assigned to an absorbing species within the cavity. These revelations have important implications for many existing examples of cavity-modified chemistry and establishing best practices for carrying out robust future investigations.</p>","PeriodicalId":14,"journal":{"name":"ACS Combinatorial Science","volume":"146 44","pages":"30596–30606 30596–30606"},"PeriodicalIF":14.4,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142585949","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}