Irene ARNOLDI, Davide CARRARETTO, Marco MUNARI, Matteo NANNINI, Maria Cristina GAMBI, Antonio CANNAVACCIUOLO, Camilla DELLA TORRE, Paolo GABRIELI
{"title":"Shifting microbial communities in acidified seawaters: insights from polychaetes living in the CO2 vent of Ischia, Italy","authors":"Irene ARNOLDI, Davide CARRARETTO, Marco MUNARI, Matteo NANNINI, Maria Cristina GAMBI, Antonio CANNAVACCIUOLO, Camilla DELLA TORRE, Paolo GABRIELI","doi":"10.1111/1749-4877.12904","DOIUrl":"https://doi.org/10.1111/1749-4877.12904","url":null,"abstract":"Oceans’ absorption of human‐related CO<jats:sub>2</jats:sub> emissions leads to a process called ocean acidification (OA), consisting of the decrease of the seawater pH with negative consequences for many marine organisms. In this study, we investigate the microbial community of two species of polychaetes found in naturally acidified CO<jats:sub>2</jats:sub> vents: the nereid <jats:italic>Platynereis massiliensis</jats:italic> complex and the syllid <jats:italic>Syllis prolifera</jats:italic>. Animals were collected in the CO<jats:sub>2</jats:sub> vents of Castello Aragonese (Gulf of Naples, Ischia, Italy) in three zones at decreasing pH. For the analysis of the microbiome, the V3‐V4 hypervariable region of the 16S ribosomal RNA gene of 40 worm samples was sequenced on an Illumina MiSeq platform. No difference in the microbial alpha diversity of both species was highlighted. On the contrary, the microbial composition of worms collected in the site at normal pH was different from that of the individuals obtained from the sites at lower pH. This effect was evident also in samples from the site with a slight, but relevant, degree of acidification. Amplicon sequence variants showing a significant variation among the groups of samples collected from different pH zones were reported for both polychaetes, but no common trend of variation was observed. The present study deepens our knowledge about the composition of polychaete microbiome in marine naturally acidified sites. Our results stress the importance of future investigations about the connection between the variation of environmental and polychaete microbial communities induced by OA and about the effect of these variations on polychaete key biological and ecological traits.","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":"15 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142248601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Datian LANG, Junsong ZHAO, Songju LIU, Yuan MU, Tiantian ZOU
{"title":"Adaptive evolution of pancreatic ribonuclease gene (RNase1) in Cetartiodactyla","authors":"Datian LANG, Junsong ZHAO, Songju LIU, Yuan MU, Tiantian ZOU","doi":"10.1111/1749-4877.12895","DOIUrl":"https://doi.org/10.1111/1749-4877.12895","url":null,"abstract":"Pancreatic ribonuclease (RNase1), a digestive enzyme produced by the pancreas, is associated with the functional adaptation of dietary habits and is regarded as an attractive model system for studies of molecular evolution. In this study, we identified 218 functional genes and 48 pseudogenes from 114 species that span all four Cetartiodactyla lineages: two herbivorous lineages (Ruminantia and Tylopoda) and two non‐herbivorous lineages (Cetancodonta and Suoidea). Multiple <jats:italic>RNase1</jats:italic> genes were detected in all species of the two herbivorous lineages, and phylogenetic and genomic location analyses demonstrated that independent gene duplication events occurred in Ruminantia and Tylopoda. In Ruminantia, the gene duplication events occurred in the ancestral branches of the lineage in the Middle Eocene, a time of increasing climatic seasonality during which Ruminantia rapidly radiated. In contrast, only a single <jats:italic>RNase1</jats:italic> gene was observed in the species of the two non‐herbivorous lineages (Cetancodonta and Suoidea), suggesting that the previous Cetacea‐specific loss hypothesis should be rejected. Moreover, the duplicated genes of <jats:italic>RNase1</jats:italic> in the two herbivorous lineages (Ruminantia and Tylopoda) may have undergone functional divergence. In combination with the temporal coincidence between gene replication and the enhanced climatic seasonality during the Middle Eocene, this functional divergence suggests that <jats:italic>RNase1</jats:italic> gene duplication was beneficial for Ruminantia to use the limited quantities of sparse fibrous vegetation and adapt to seasonal changes in climate. In summary, the findings indicate a complex and intriguing evolutionary pattern of <jats:italic>RNase1</jats:italic> in Cetartiodactyla and demonstrate the molecular mechanisms by which organisms adapt to the environment.","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":"6 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142248636","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Fernanda GARCIA, António ALVES DA SILVA, José Paulo SOUSA, Joana ALVES
{"title":"The role of wild red deer on soil physical properties in a Mediterranean ecosystem: insights from a Portuguese mountain","authors":"Fernanda GARCIA, António ALVES DA SILVA, José Paulo SOUSA, Joana ALVES","doi":"10.1111/1749-4877.12894","DOIUrl":"https://doi.org/10.1111/1749-4877.12894","url":null,"abstract":"In this study we aimed to assess the role of wild red deer, along with other ungulates such as roe deer and wild boar, in the soil's physical properties, namely soil penetration resistance and depth (used as a proxy for soil compaction), hydraulic conductivity (a proxy for water infiltration), and the proportion of soil stable aggregates. Results showed that, at the density level found in our study area, red deer have a neutral effect at the soil level, not causing significant soil compaction or significantly influencing measured soil functions.","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":"10 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142181952","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Linlin LI, Xin LI, Yongling JIN, Haoting ZHANG, Fan BU, Rong ZHANG, Xiaodong WU, Shuai YUAN, Heping FU
{"title":"Group effects of desert rodent communities on plant seed dispersal","authors":"Linlin LI, Xin LI, Yongling JIN, Haoting ZHANG, Fan BU, Rong ZHANG, Xiaodong WU, Shuai YUAN, Heping FU","doi":"10.1111/1749-4877.12897","DOIUrl":"https://doi.org/10.1111/1749-4877.12897","url":null,"abstract":"Desert rodent communities spread plant seeds through the group effect of \"selection complementation\" and \"fate complementation,\" which promotes the recovery of plant populations and the reconstruction of plant communities in desert areas.","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":"32 1","pages":""},"PeriodicalIF":3.3,"publicationDate":"2024-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142181953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yongpu Zhang, Shuran Li, Yongrui Chen, Yinzi Ye, Pengfei Wu, Lei Xie, Weiguo DU
{"title":"Does embryonic behavioral thermoregulation enhance thermoregulatory capacity of turtle hatchlings?","authors":"Yongpu Zhang, Shuran Li, Yongrui Chen, Yinzi Ye, Pengfei Wu, Lei Xie, Weiguo DU","doi":"10.1111/1749-4877.12902","DOIUrl":"https://doi.org/10.1111/1749-4877.12902","url":null,"abstract":"<p><p>We found that embryonic behavioral thermoregulation could not enhance the thermoregulatory capacity of turtle hatchlings. Our study is not only the first to provide experimental evidence regarding the impact of embryonic behavioral thermoregulation on offspring thermoregulation but also falsifies the play behavior hypothesis that suggests thermotaxis by embryos allows them to practice thermoregulatory tactics at later life stages.</p>","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":" ","pages":""},"PeriodicalIF":3.5,"publicationDate":"2024-09-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142153900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Daniel A Warner, Timothy S Mitchell, Fredric J Janzen
{"title":"Increased nest temperature during winter does not affect residual yolk metabolism of hatchling painted turtles (Chrysemys picta).","authors":"Daniel A Warner, Timothy S Mitchell, Fredric J Janzen","doi":"10.1111/1749-4877.12890","DOIUrl":"https://doi.org/10.1111/1749-4877.12890","url":null,"abstract":"<p><p>Rising global temperatures have a wide range of effects at organismal, population, and ecosystem levels. Increased winter temperatures are expected to alter the energetics of species that are dormant during this time. Hatchling painted turtles (Chrysemys picta) spend their first ∼8 months in shallow nests on land, where they putatively rely on residual yolk reserves to fuel energetic demands during this period of inactivity before they emerge in the spring. We performed a laboratory experiment to characterize changes in residual yolk quantity in hatchling C. picta and experimentally tested the effect of temperature on residual yolk, hatchling size, and survival over the winter brumation period. We manipulated winter nest temperature by simulating two natural thermal regimes (\"low\" vs \"high\" treatments) and one regime that approximates warmer temperatures expected by 2100 (\"future\" treatment). Because high temperature increases metabolism, we predicted that the future temperature treatment would decrease the amount of residual yolk remaining by the end of winter and reduce hatchling mass and survival. Residual yolk over winter did not differ from that before winter, and the temperature had no effect on the quantity of residual yolk or hatchling survival by the following spring. However, hatchlings that experienced future temperatures lost more mass over winter than those from the other treatments. These results correspond with previous work indicating that residual yolk does not fuel the energetic needs of hatchlings during winter. The effect of future warming temperatures on body mass may have negative consequences during energetically demanding activities during spring emergence and dispersal.</p>","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":" ","pages":""},"PeriodicalIF":3.5,"publicationDate":"2024-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142125645","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Defensive behaviors and c-fos expression in the midbrain.","authors":"Ersin Yavas, Michael S Fanselow","doi":"10.1111/1749-4877.12892","DOIUrl":"https://doi.org/10.1111/1749-4877.12892","url":null,"abstract":"<p><p>Pavlovian fear conditioning serves as a valuable method for investigating species-specific defensive reactions (SSDRs) such as freezing and flight responses. The present study examines the role of white noise under different experimental conditions. Given that white noise has been shown to elicit both conditional (associative) and unconditional (nonassociative) defensive responses, we compared the response to noise following three separate training conditions: shock-only, white noise paired with shock, and context-only. Results showed that baseline freezing level significantly changed across groups: Both the shock-only group and the white noise paired with shock group froze more than the context-only group on the test day. White noise evoked differential freezing between groups on day 2: The shock-only group froze more than the context-only group although both groups were never exposed to white noise during training. Further, an activity burst triggered by white noise was similar for the shock-only and white noise paired with shock groups during testing, although shock-only group was never exposed to white noise stimuli during training. This aligned with c-fos data, indicating similar c-fos activity levels across different periaqueductal gray (PAG) regions for both shock-only and white noise paired with shock groups. However, the driving force behind c-fos activation-whether freezing, activity burst, or a combination of both-remains uncertain, warranting further analysis to explore specific correlations between SSDRs and c-fos activity within the PAG and related brain areas.</p>","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":" ","pages":""},"PeriodicalIF":3.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142107032","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Mar Comas, Francisco J Zamora-Camacho, Jorge Garrido-Bautista, Gregorio Moreno-Rueda, José Martín, Pilar López
{"title":"Mounting an immune response reduces male attractiveness in a lizard.","authors":"Mar Comas, Francisco J Zamora-Camacho, Jorge Garrido-Bautista, Gregorio Moreno-Rueda, José Martín, Pilar López","doi":"10.1111/1749-4877.12889","DOIUrl":"https://doi.org/10.1111/1749-4877.12889","url":null,"abstract":"<p><p>Parasites impact host fitness and constitute an important selective pressure on the host's life history. According to parasite-mediated sexual selection, ornaments are presumed to honestly indicate immune capacity or resistance against parasites, and the chooser sex (typically females) obtains an advantage by selecting more ornamented, thus more immunocompetent mates. Therefore, signalers mounting an immune response must allocate resources from the sexual signal to the immune system, hence reducing the expression of the ornament and becoming less attractive to the choosing sex. Here, we test this idea in the lizard Psammodromus algirus. We inoculated a subsample of males with lipopolysaccharide (LPS) of the cell wall of Escherichia coli, while others served as sham controls. The inoculation of LPS decreased the proportion of ergosterol (pro-vitamin D<sub>2</sub>) in femoral secretions, and chemosensory tests showed that the scent of LPS-inoculated males was less attractive to females than the scent of control males. Given that ergosterol is a precursor of vitamin D, which has physiological functions as an immune modulator, immunocompromised males likely needed to divert vitamin D to the immune system, reducing the allocation of ergosterol to secretions. In this way, females could detect \"sick\" males, preferring the apparently healthy males. Overall, our study shows that mounting an immune response is costly in terms of reduced attractiveness. Moreover, we disentangle the underlying mechanism, which involves an honest signal based on vitamin D allocation.</p>","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":" ","pages":""},"PeriodicalIF":3.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142107035","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Matjaž Kuntner, Maj Kuntner, Eva Kuntner, Irena Kuntner, Jana Faganeli Pucer, Erik Štrumbelj, Daiqin Li
{"title":"Nephila spider male aggregation: preference for optimal female size and web clustering.","authors":"Matjaž Kuntner, Maj Kuntner, Eva Kuntner, Irena Kuntner, Jana Faganeli Pucer, Erik Štrumbelj, Daiqin Li","doi":"10.1111/1749-4877.12896","DOIUrl":"https://doi.org/10.1111/1749-4877.12896","url":null,"abstract":"<p><p>Sexual size dimorphism theory predicts biased operational sex ratios (OSRs) and an uneven distribution of males among certain females. We studied this phenomenon through a field census of the giant wood spider Nephila pilipes (family Nephilidae) in Singapore, a species where females are, on average, 6.9 times larger than males. Specifically, we tested two hypotheses concerning male distribution, given their tendency to aggregate in certain female webs. The optimal female size hypothesis predicts that males would predominantly occupy webs of intermediate-sized females. The web clustering hypothesis posits that more males would be found in webs closer together compared to those farther apart. Our snapshot census revealed a female-biased OSR (females: males = 1.85) with an uneven distribution of males in female webs. Most males were found in webs of intermediate-sized females aligning with the optimal female size hypothesis. Proximity among female webs was indicative of male presence, lending support to the web clustering hypothesis. While our study's limited sample size warrants caution, we conclude that in N. pilipes, male occupation of female webs is facilitated by the clustering of webs, and males prefer to cohabit with optimally sized, receptive females.</p>","PeriodicalId":13654,"journal":{"name":"Integrative zoology","volume":" ","pages":""},"PeriodicalIF":3.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142107036","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}