Fungal Genetics Reports最新文献

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Predicting the Identities of su(met-2) and met-3 in Neurospora crassa by Genome Resequencing 通过基因组重测序预测糠虾神经孢子中su(met-2)和met-3的身份
Fungal Genetics Reports Pub Date : 2024-02-01 DOI: 10.4148/1941-4765.2183
Kevin McCluskey, Daren Brown, E. Bredeweg, Scott E Baker
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引用次数: 0
On computing relative effective population size estimates and parameters from an equilibrium cycle of hermaphrodite frequency fluctuation due to mixed reproductive modes in filamentous fungi 丝状真菌混合繁殖模式下雌雄同体频率波动的平衡周期计算相对有效种群大小估计和参数
Fungal Genetics Reports Pub Date : 2021-11-24 DOI: 10.4148/1941-4765.2176
C. Toomajian
{"title":"On computing relative effective population size estimates and parameters from an equilibrium cycle of hermaphrodite frequency fluctuation due to mixed reproductive modes in filamentous fungi","authors":"C. Toomajian","doi":"10.4148/1941-4765.2176","DOIUrl":"https://doi.org/10.4148/1941-4765.2176","url":null,"abstract":"Many filamentous ascomycete fungi reproduce primarily asexually, with only occasional sexual generations. This can lead to a departure from the 1:1 mating type ratio that is expected in obligate sexual populations. The relaxed selection on sexual traits also can lead to a decrease in the frequency of female fertile strains in field populations, while male fertility does not similarly decrease since male gametes also can serve as asexual spores. Both changes ultimately impact the strength of genetic drift in populations. The frequency of female sterility likely increases with the time since the last generation of sexual reproduction, such that it can be used to estimate the relative frequency of sexual reproduction. Here I provide additional details relevant to Leslie and Klein’s (1996) model of mixed sexual reproduction and vegetative propagation as related to the frequency of female sterility. This includes new or modified equations that allow for simpler calculations of i) two estimates of relative Ne, ii) the expected range of hermaphrodite frequencies during the cycles of mixed reproduction, and iii) the relative frequency of sex. These equations also are included in spreadsheet templates into which researchers can directly enter frequencies computed from their population data to estimate these parameters for their own populations. These resources will make the results of Leslie and Klein (1996) more accessible and should increase the use of this model in evaluating the frequency of sexual reproduction of filamentous fungi.","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"13 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2021-11-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81899501","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Relative efficiency of split-marker versus double-crossover replacement protocols for production of deletion mutants in strain PH-1 of Fusarium graminearum 稻瘟病菌PH-1缺失突变体产生的分裂标记与双交叉替代方案的相对效率
Fungal Genetics Reports Pub Date : 2021-01-01 DOI: 10.4148/1941-4765.2175
S. Bec, Gabdiel Yulfo-Soto, L. Vaillancourt
{"title":"Relative efficiency of split-marker versus double-crossover replacement protocols for production of deletion mutants in strain PH-1 of Fusarium graminearum","authors":"S. Bec, Gabdiel Yulfo-Soto, L. Vaillancourt","doi":"10.4148/1941-4765.2175","DOIUrl":"https://doi.org/10.4148/1941-4765.2175","url":null,"abstract":"The split-marker (SM) protocol has become a popular method for production of knockout mutations in fungi. We used Southern hybridization to compare the performance and efficiency of the SM protocol with the more traditional double-crossover intact marker (IM) method for creating deletions of the mating type genes in Fusarium graminearum. Both methods successfully produced knockouts at a rate of between 24 and 75%: the SM method produced mutants more efficiently for larger constructs (>1 kb), but it was similar to IM for a smaller construct that was 865 bp. Both methods also produced strains with additional ectopic integrations at a similar rate of approximately 10%, but on average the SM produced a higher number of independent integrations in those strains. Ectopic integrations produce off-site mutations, and strains with multiple integrations are less desirable since it is more difficult to remove them by backcrossing. Southern hybridizations will be generally superior to PCR to identify strains with fewer ectopic integrations for experimental purposes.","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"146 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79661124","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetic Analysis and Mapping of Avirulence Genes in Magnaporthe grisea 稻瘟病病菌毒力基因的遗传分析与定位
Fungal Genetics Reports Pub Date : 2020-11-25 DOI: 10.1201/9781003067436-14
M. Farman, S. Leong
{"title":"Genetic Analysis and Mapping of Avirulence Genes in Magnaporthe grisea","authors":"M. Farman, S. Leong","doi":"10.1201/9781003067436-14","DOIUrl":"https://doi.org/10.1201/9781003067436-14","url":null,"abstract":"","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"46 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79252444","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biology of Fungi 真菌生物学
Fungal Genetics Reports Pub Date : 2020-11-25 DOI: 10.1201/9781003067436-1
C. J. Bos
{"title":"Biology of Fungi","authors":"C. J. Bos","doi":"10.1201/9781003067436-1","DOIUrl":"https://doi.org/10.1201/9781003067436-1","url":null,"abstract":"","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"19 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80080692","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Somatic Recombination 体复合
Fungal Genetics Reports Pub Date : 2020-11-25 DOI: 10.1201/9781003067436-4
C. J. Bos
{"title":"Somatic Recombination","authors":"C. J. Bos","doi":"10.1201/9781003067436-4","DOIUrl":"https://doi.org/10.1201/9781003067436-4","url":null,"abstract":"","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"26 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79278966","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mutation 突变
Fungal Genetics Reports Pub Date : 2020-11-25 DOI: 10.1201/9781003067436-2
C. J. Bos, D. Stadler
{"title":"Mutation","authors":"C. J. Bos, D. Stadler","doi":"10.1201/9781003067436-2","DOIUrl":"https://doi.org/10.1201/9781003067436-2","url":null,"abstract":"PROFESSIONAL EDUCATION • Board Certification: Maternal and Fetal Medicine, American Board of Obstetrics and Gynecology (2021) • Board Certification: Obstetrics and Gynecology, American Board of Obstetrics and Gynecology (2018) • Fellowship: UC Irvine Medical Genetics Fellowship (2018) CA • Fellowship: UC Irvine Maternal Fetal Medicine Fellowship (2018) CA • Residency: UC Irvine Obstetrics and Gynecology Residency (2014) CA • Medical Education: University of California at San Francisco School of Medicine (2010) CA","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"2 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81781855","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Carlene Allen Raper 1925-2019 卡琳·艾伦·雷珀1925-2019
Fungal Genetics Reports Pub Date : 2020-03-12 DOI: 10.4148/1941-4765.2174
J. Loros, J. Dunlap
{"title":"Carlene Allen Raper 1925-2019","authors":"J. Loros, J. Dunlap","doi":"10.4148/1941-4765.2174","DOIUrl":"https://doi.org/10.4148/1941-4765.2174","url":null,"abstract":"","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"78 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-03-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"86887297","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Meiotic Recombination* 减数分裂重组*
Fungal Genetics Reports Pub Date : 2020-02-07 DOI: 10.1007/springerreference_33429
K. Esser
{"title":"Meiotic Recombination*","authors":"K. Esser","doi":"10.1007/springerreference_33429","DOIUrl":"https://doi.org/10.1007/springerreference_33429","url":null,"abstract":"","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"7 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83597292","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 49
Excellence by Simplicity: Life and Contributions of Professor Ramesh Maheshwari (1940-2019) 简约卓越:拉梅什·马赫什瓦里教授的生活与贡献(1940-2019)
Fungal Genetics Reports Pub Date : 2019-07-01 DOI: 10.4148/1941-4765.2171
K. Adhvaryu
{"title":"Excellence by Simplicity: Life and Contributions of Professor Ramesh Maheshwari (1940-2019)","authors":"K. Adhvaryu","doi":"10.4148/1941-4765.2171","DOIUrl":"https://doi.org/10.4148/1941-4765.2171","url":null,"abstract":"","PeriodicalId":12490,"journal":{"name":"Fungal Genetics Reports","volume":"26 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2019-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"78876355","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
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