FEMS microbiology reviews最新文献_第10页

Ambrosia gall midges (Diptera: Cecidomyiidae) and their microbial symbionts as a neglected model of fungus-farming evolution. 瘿蚊（双翅目：瘿蚊科）及其微生物共生体作为一种被忽视的真菌养殖进化模式。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf010

Petr Pyszko, Hana Šigutová, Jan Ševčík, Michaela Drgová, Denisa Hařovská, Pavel Drozd

{"title":"Ambrosia gall midges (Diptera: Cecidomyiidae) and their microbial symbionts as a neglected model of fungus-farming evolution.","authors":"Petr Pyszko, Hana Šigutová, Jan Ševčík, Michaela Drgová, Denisa Hařovská, Pavel Drozd","doi":"10.1093/femsre/fuaf010","DOIUrl":"10.1093/femsre/fuaf010","url":null,"abstract":"Ambrosia gall midges (AGMs) represent an intriguing group within the Cecidomyiidae, one of the most diversified dipteran families. AGMs form galls on plants, where they cultivate and consume fungal symbionts (phytomycetophagy). This mutualistic relationship may play a critical role in larval nutrition, gall morphogenesis, and protection against natural enemies. Although most other fungus-farming taxa have been intensively studied, AGMs have largely been neglected. This review synthesizes current knowledge on the diversity, biology, and ecological interactions of AGM, highlighting the intricate relationships with their fungal symbionts. The implications for adaptive radiation and speciation are critically considered, including how fungal associations may have facilitated ecological flexibility and diversification. We also tackle the processes of coevolution, not only between AGM and their fungal symbionts but also involving plants and parasitoids. We identify the most pressing issues and discrepancies in the current understanding the AGM-fungi interactions. Key areas of future research should include elucidating fungal acquisition and transmission mechanisms, determining the specificity and diversity of AGM-associated fungal communities, understanding the evolutionary pathways leading to phytomycetophagy, and addressing taxonomic challenges within the AGM group, where species identification has been complicated by reliance on gall morphology and host specificity.","PeriodicalId":12201,"journal":{"name":"FEMS microbiology reviews","volume":" ","pages":""},"PeriodicalIF":16.9,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11997659/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143771668","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Microbial functional diversity and redundancy: moving forward. 微生物功能多样性和冗余：向前发展。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuae031

Pierre Ramond, Pierre E Galand, Ramiro Logares

引用次数: 0

Hallmarks of DNA replication stress responses in Escherichia coli and Bacillus subtilis. 大肠杆菌和枯草芽孢杆菌DNA复制应激反应的特征。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf041

Rubén Torres, Begoña Carrasco, Silvia Ayora, Juan C Alonso

{"title":"Hallmarks of DNA replication stress responses in Escherichia coli and Bacillus subtilis.","authors":"Rubén Torres, Begoña Carrasco, Silvia Ayora, Juan C Alonso","doi":"10.1093/femsre/fuaf041","DOIUrl":"10.1093/femsre/fuaf041","url":null,"abstract":"Escherichia coli and Bacillus subtilis provide well-studied models for understanding how bacteria manage DNA replication stress (RS). These bacteria employ various strategies to detect and stabilize stalled replication forks (RFs), circumvent or bypass lesions, resolve replication-transcription conflicts (RTCs), and resume replication. While central features of responses to RS are broadly conserved, distinct mechanisms have evolved to adapt to their complex environments. In this review, we compare the RS sensors, regulators, and molecular players of these two phylogenetically distant bacteria. The differing roles of the RecA recombinase are used as the touchstone of the distinct strategies each bacterium employs to overcome RS, provided that the fork does not collapse. In E. coli, RecA mainly assembles at locations distal from replisomes, promotes global responses, and contributes to circumvent or bypass lesions. RecA assembles less frequently at stalled RFs, and its role in lesion skipping, fork remodeling, RTC resolution, and replication restart remains poorly defined. In contrast, in B. subtilis, RecA assembles at stalled forks, fine-tunes damage signaling, and, in concert with RecA-interacting proteins, may facilitate fork remodeling or lesion bypass, overcome RTCs, and contribute to replication restart.","PeriodicalId":12201,"journal":{"name":"FEMS microbiology reviews","volume":" ","pages":""},"PeriodicalIF":16.9,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12448304/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144948040","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Surfing in the storm: how Paraburkholderia xenovorans thrives under stress during biodegradation of toxic aromatic compounds and other stressors. 在风暴中冲浪：在有毒芳香化合物和其他压力源的生物降解过程中，异种拟aburkholderia xenovans如何在压力下茁壮成长。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf021

Valentina Méndez, Mario Sepúlveda, Katherin Izquierdo-Fiallo, Constanza C Macaya, Teresa Esparza, Ximena Báez-Matus, Roberto E Durán, Gloria Levicán, Michael Seeger

{"title":"Surfing in the storm: how Paraburkholderia xenovorans thrives under stress during biodegradation of toxic aromatic compounds and other stressors.","authors":"Valentina Méndez, Mario Sepúlveda, Katherin Izquierdo-Fiallo, Constanza C Macaya, Teresa Esparza, Ximena Báez-Matus, Roberto E Durán, Gloria Levicán, Michael Seeger","doi":"10.1093/femsre/fuaf021","DOIUrl":"10.1093/femsre/fuaf021","url":null,"abstract":"The adaptive mechanisms of Burkholderiales during the catabolism of aromatic compounds and abiotic stress are crucial for their fitness and performance. The aims of this report are to review the bacterial adaptation mechanisms to aromatic compounds, oxidative stress, and environmental stressful conditions, focusing on the model aromatic-degrading Paraburkholderia xenovorans LB400, other Burkholderiales, and relevant degrading bacteria. These mechanisms include (i) the stress response during aromatic degradation, (ii) the oxidative stress response to aromatic compounds, (iii) the metabolic adaptation to oxidative stress, (iv) the osmoadaptation to saline stress, (v) the synthesis of siderophore during iron limitation, (vi) the proteostasis network, which plays a crucial role in cellular function maintenance, and (vii) the modification of cellular membranes, morphology, and bacterial lifestyle. Remarkably, we include, for the first time, novel genomic analyses on proteostasis networks, carbon metabolism modulation, and the synthesis of stress-related molecules in P. xenovorans. We analyzed these metabolic features in silico to gain insights into the adaptive strategies of P. xenovorans to challenging environmental conditions. Understanding how to enhance bacterial stress responses can lead to the selection of more robust strains capable of thriving in polluted environments, which is critical for improving biodegradation and bioremediation strategies.","PeriodicalId":12201,"journal":{"name":"FEMS microbiology reviews","volume":" ","pages":""},"PeriodicalIF":16.9,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12117332/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144101592","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Forging new paths in bacterial motility and sensory transduction: highlights from BLAST XVIII. 细菌运动和感觉转导的新途径：来自BLAST XVIII的亮点。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf042

TuAnh N Huynh, Sima Setayeshgar, Abishek Shrivastava, Joanne Engel

引用次数: 0

Impact of bacterial vaginosis on sexually transmitted viral infections: a bacterial point of view. 细菌性阴道病对性传播病毒感染的影响：从细菌的角度。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf039

Celia Segui-Perez, Marleen Y van Smoorenburg, Anna E Maranus, Teunis B H Geijtenbeek, Karin Strijbis

{"title":"Impact of bacterial vaginosis on sexually transmitted viral infections: a bacterial point of view.","authors":"Celia Segui-Perez, Marleen Y van Smoorenburg, Anna E Maranus, Teunis B H Geijtenbeek, Karin Strijbis","doi":"10.1093/femsre/fuaf039","DOIUrl":"10.1093/femsre/fuaf039","url":null,"abstract":"Bacterial vaginosis (BV) is a complex polymicrobial vaginal infection that affects a large percentage of women during different stages of life including the reproductive age. In a healthy vaginal environment, the epithelium is colonized by protective Lactobacillus species that make up 90%-95% of the total vaginal microbiota. BV is characterized by a reduction of lactobacilli and a concurrent increase in diverse anaerobic bacteria, including Gardnerella vaginalis, Prevotella bivia, Hoylesella timonensis, and Fannyhessea vaginae. BV is associated with an increased risk of infertility, preterm birth, and a higher susceptibility to sexually transmitted infections (STIs), including Human Immunodeficiency Virus type-1 (HIV-1). This review examines the contribution of individual pathogenic bacteria to the development of BV and the resulting effects on susceptibility to STI. The impact of the different key bacterial virulence factors, such as secreted proteins, biofilm formation, and inflammatory potential on subsequent viral infection are discussed. While antibiotics are commonly prescribed to treat BV, recurrence rates are high, and antimicrobial resistance among BV-associated bacteria is increasingly reported. Understanding the mechanisms underlying BV and the impact of specific bacteria and their virulence factors on viral infections can improve preventive strategies and open up novel therapeutic applications.","PeriodicalId":12201,"journal":{"name":"FEMS microbiology reviews","volume":" ","pages":""},"PeriodicalIF":16.9,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12422016/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144948129","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Mechanisms underlying alterations of the gut microbiota by exercise and their role in shaping ecological resilience. 运动改变肠道微生物群的机制及其在塑造生态弹性中的作用。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf037

Alex E Mohr, Núria Mach, Jamie Pugh, Gregory J Grosicki, Jacob M Allen, J Philip Karl, Corrie M Whisner

{"title":"Mechanisms underlying alterations of the gut microbiota by exercise and their role in shaping ecological resilience.","authors":"Alex E Mohr, Núria Mach, Jamie Pugh, Gregory J Grosicki, Jacob M Allen, J Philip Karl, Corrie M Whisner","doi":"10.1093/femsre/fuaf037","DOIUrl":"10.1093/femsre/fuaf037","url":null,"abstract":"The gut microbiota (GM) is a dynamic ecosystem intricately linked to human health, including metabolic, immune, endocrine, and gastrointestinal functions. Exercise is recognized as a significant modifier of this microbial ecosystem, yet the complexities of this relationship are underexplored. Here, we delve into the multifaceted interactions between structured physical activity and the GM, emphasizing the role of exercise-induced stressors in shaping microbial composition and function. Unique to our review, we discuss the acute effects of different forms of exercise-induced stress on the GM and explore how these responses may influence long-term adaptability, stability, and resilience. Furthermore, we address critical junctures in microbial dynamics leading to shifts between different stable states. Finally, we explore the implications of host-controlled factors such as diet, exercise training, and nutritional supplementation in modulating the microbial community in the gut to optimize athletic performance. We conclude that while the potential to harness the synergistic effects of exercise-induced stressors, dietary interventions, and microbial adaptations appears promising, current evidence remains preliminary, highlighting the need for additional targeted research to guide future strategies that manipulate the GM for optimal health and athletic performance.","PeriodicalId":12201,"journal":{"name":"FEMS microbiology reviews","volume":" ","pages":""},"PeriodicalIF":16.9,"publicationDate":"2025-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12366553/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144834668","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}

引用次数: 0

Ex vivo study of neuroinvasive and neurotropic viruses: what is current and what is next. 神经侵入性和嗜神经性病毒的离体研究：当前和未来。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf024

Alexandre Lalande, Cyrille Mathieu

引用次数: 0

Post-translational modifications of the nucleoid protein H-NS: sites, mechanisms, and regulatory cues. 类核蛋白H-NS的翻译后修饰：位点、机制和调控线索。

IF 16.9 2区生物学

FEMS microbiology reviews Pub Date : 2025-01-14 DOI: 10.1093/femsre/fuaf045

Yabo Liu, Xiaoxue Wang

引用次数: 0

Where the microbes aren't. 微生物不存在的地方。