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The Lateral Habenula Is Necessary for Maternal Behavior in the Naturally Parturient Primiparous Mouse Dam. 侧缰对自然分娩的初产鼠坝母性行为是必需的。
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-13 Print Date: 2025-01-01 DOI: 10.1523/ENEURO.0092-24.2024
Jessie Benedict, Robert H Cudmore, Diarra Oden, Aleah Spruell, David J Linden
{"title":"The Lateral Habenula Is Necessary for Maternal Behavior in the Naturally Parturient Primiparous Mouse Dam.","authors":"Jessie Benedict, Robert H Cudmore, Diarra Oden, Aleah Spruell, David J Linden","doi":"10.1523/ENEURO.0092-24.2024","DOIUrl":"10.1523/ENEURO.0092-24.2024","url":null,"abstract":"<p><p>Mammalian parenting is an unusually demanding commitment. How has the reward system been co-opted to ensure parental care? Previous work has implicated the lateral habenula (LHb), an epithalamic nucleus, as a potential intersection of parenting behavior and reward. Here, we examine the role of the LHb in the maternal behavior of naturally parturient primiparous mouse dams. We show that kainic acid lesions of the LHb induced a severe maternal neglect phenotype in dams toward their biological pups. Next, we demonstrate that chronic chemogenetic inactivation of the LHb using inhibitory DREADDs impaired acquisition and performance of various maternal behaviors, such as pup retrieval and nesting. We present a random intercept model suggesting LHb inactivation prevents the acquisition of pup retrieval, a novel maternal behavior in primiparous mouse dams, and decreases nest building performance, an already-established behavior, in primiparous mouse dams. Lastly, we examine the spatial histology of kainic acid-treated dams with a random intercept model, which suggests the role of LHb in maternal behavior may be preferentially localized at the posterior aspect of this structure. Together, these findings serve to establish the LHb as required for maternal behavior in the mouse dam, thereby complementing previous findings implicating the LHb in parental behavior using pup-sensitized virgin female mice.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11734883/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142846206","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Functional Regrowth of Norepinephrine Axons in the Adult Mouse Brain Following Injury. 成年小鼠脑损伤后去甲肾上腺素轴突的功能再生。
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-10 Print Date: 2025-01-01 DOI: 10.1523/ENEURO.0418-24.2024
Patrick Cooke, David J Linden
{"title":"Functional Regrowth of Norepinephrine Axons in the Adult Mouse Brain Following Injury.","authors":"Patrick Cooke, David J Linden","doi":"10.1523/ENEURO.0418-24.2024","DOIUrl":"10.1523/ENEURO.0418-24.2024","url":null,"abstract":"<p><p>It is widely believed that axons in the central nervous system of adult mammals do not regrow following injury. This failure is thought, at least in part, to underlie the limited recovery of function following injury to the brain or spinal cord. Some studies of fixed tissue have suggested that, counter to dogma, norepinephrine (NE) axons regrow following brain injury. Here, we have used in vivo two-photon microscopy in layer 1 of the primary somatosensory cortex in transgenic mice harboring a fluorophore selectively expressed in NE neurons. This protocol allowed us to explore the dynamic nature of NE axons following injury with the selective NE axon toxin <i>N</i>-(2-chloroethyl)-<i>N</i>-ethyl-2-bromobenzylamine (DSP4). Following DSP4, NE axons were massively depleted and then slowly and partially recovered their density over a period of weeks. This regrowth was dominated by new axons entering the imaged volume. There was almost no contribution from local sprouting from spared NE axons. Regrown axons did not appear to use either the paths of previously lesioned NE axons or NE axons that were spared and survived DSP4 as a guide. To measure NE release, GCaMP8s was selectively expressed in neocortical astrocytes and startle-evoked, NE receptor-mediated Ca<sup>2+</sup> transients were measured. These Ca<sup>2+</sup> transients were abolished soon after DSP4 lesion but returned to pre-lesion values after 3-5 weeks, roughly coincident with NE axon regrowth, suggesting that the regrown NE axons are competent to release NE in response to a physiological stimulus in the awake mouse.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11729145/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142893010","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Interaction between Facial Expression and Color in Modulating ERP P3. 面部表情和颜色在调节ERP P3中的相互作用。
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-10 Print Date: 2025-01-01 DOI: 10.1523/ENEURO.0419-24.2024
Yuya Hasegawa, Hideki Tamura, Shigeki Nakauchi, Tetsuto Minami
{"title":"Interaction between Facial Expression and Color in Modulating ERP P3.","authors":"Yuya Hasegawa, Hideki Tamura, Shigeki Nakauchi, Tetsuto Minami","doi":"10.1523/ENEURO.0419-24.2024","DOIUrl":"10.1523/ENEURO.0419-24.2024","url":null,"abstract":"<p><p>The relationships between facial expression and color affect human cognition functions such as perception and memory. However, whether these relationships influence selective attention and brain activity contributed to selective attention remains unclear. For example, reddish angry faces increase emotion intensity, but it is unclear whether brain activity and selective attention are similarly enhanced. To investigate these questions, we examined whether event-related potentials for faces vary depending on facial expression and color by recording electroencephalography (EEG) data. We conducted an oddball task using stimuli that combined facial expressions (angry, neutral) and facial colors (original, red, green). The participants counted the number of times a rarely appearing target face stimulus appeared among the standard face stimuli. The results indicated that the difference in P3 amplitudes for the target and standard faces depended on the combinations of facial expressions and facial colors; the P3 for red angry faces were greater than those for red neutral faces. Additionally, facial expression or facial color had no significant main effect or interaction effect on P1 amplitudes for the target, and facial expression had significant main effects only on the N170 amplitude. These findings suggest that the interaction between facial expression and color modulates the P3 associated with selective attention. Moreover, the response enhancement resulting from this interaction appears to occur at a cognitive processing stage that follows the processing stage associated with facial color or expression alone. Our results support the idea that red color increases the human response to anger from an EEG perspective.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":"12 1","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11728265/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142964255","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PeerPub: A Device for Concurrent Operant Oral Self-Administration by Multiple Rats. PeerPub:一种多只大鼠并发操作性口服自我给药装置。
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-09 Print Date: 2025-01-01 DOI: 10.1523/ENEURO.0241-24.2024
Paige M Lemen, Jie Ni, Jun Huang, Hao Chen
{"title":"PeerPub: A Device for Concurrent Operant Oral Self-Administration by Multiple Rats.","authors":"Paige M Lemen, Jie Ni, Jun Huang, Hao Chen","doi":"10.1523/ENEURO.0241-24.2024","DOIUrl":"10.1523/ENEURO.0241-24.2024","url":null,"abstract":"<p><p>The social environment has long been recognized to play an important role in substance use, which is often modeled in rodents using operant conditioning. However, most operant chambers only accommodate one rodent at a time. We present PeerPub-a unique social operant chamber. PeerPub employs touch sensors to track the licking behavior on drinking spouts. When the number of licks meets a set reinforcement schedule, it dispenses a drop of solution with a fixed volume as a reward at the tip of the spout. A radio frequency identification (RFID) chip implanted in each rat's skull identifies it throughout the experiment. The system is managed by a Raspberry Pi computer. We evaluated PeerPub using Sprague Dawley rats in daily 1 h sessions, where supersac (a glucose and saccharin solution) was provided under a fixed-ratio five schedule. We discovered that male rats consumed more supersac in dual rat conditions compared with single rat conditions. These findings illustrate PeerPub's effectiveness in modeling the interaction between motivated behavior and social context. We expect devices like PeerPub will help highlight the role of social environments in substance use disorder phenotypes. All computer code, 3D design, and build instructions for PeerPub can be found at http://github.com/nijie321/PeerPub.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11728851/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142921013","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Voltage-Gated Potassium Channel Shal (Kv4) Contributes to Active Hearing in Drosophila. 电压门控钾通道Shal (Kv4)参与果蝇的主动听觉。
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-09 Print Date: 2025-01-01 DOI: 10.1523/ENEURO.0083-24.2024
Eli S Gregory, YiFeng Y J Xu, Tai-Ting Lee, Mei-Ling A Joiner, Azusa Kamikouchi, Matthew P Su, Daniel F Eberl
{"title":"The Voltage-Gated Potassium Channel <i>Shal</i> (K<sub>v</sub>4) Contributes to Active Hearing in <i>Drosophila</i>.","authors":"Eli S Gregory, YiFeng Y J Xu, Tai-Ting Lee, Mei-Ling A Joiner, Azusa Kamikouchi, Matthew P Su, Daniel F Eberl","doi":"10.1523/ENEURO.0083-24.2024","DOIUrl":"10.1523/ENEURO.0083-24.2024","url":null,"abstract":"<p><p>The full complement of ion channels which influence insect auditory mechanotransduction and the mechanisms by which their influence is exerted remain unclear. <i>Shal</i> (K<sub>v</sub>4), a <i>Shaker</i> family member encoding voltage-gated potassium channels in <i>Drosophila melanogaster</i>, has been shown to localize to dendrites in some neuron types, suggesting the potential role of <i>Shal</i> in <i>Drosophila</i> hearing, including mechanotransduction. A GFP trap was used to visualize the localization of the <i>Shal</i> channel in Johnston's organ neurons responsible for hearing in the antenna. <i>Shal</i> protein was localized strongly to the cell body and inner dendritic segment of sensory neurons. It was also detectable in the sensory cilium, suggesting its involvement not only in general auditory function but specifically in mechanotransduction. Electrophysiological recordings to assess neural responses to auditory stimuli in mutant <i>Shal</i> flies revealed significant decreases in auditory responses. Laser Doppler vibrometer recordings indicated abnormal antennal free fluctuation frequencies in mutant lines, indicating an effect on active antennal tuning, and thus active transduction mechanisms. This suggests that <i>Shal</i> participates in coordinating energy-dependent antennal movements in <i>Drosophila</i> that are essential for tuning the antenna to courtship song frequencies.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11728854/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142846209","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of Baicalein Pretreatment on the NLRP3/GSDMD Pyroptosis Pathway and Neuronal Injury in Pilocarpine-Induced Status Epilepticus in the Mice. 黄芩素预处理对匹罗卡品致小鼠癫痫持续状态NLRP3/GSDMD焦亡通路及神经元损伤的影响
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-08 Print Date: 2025-01-01 DOI: 10.1523/ENEURO.0319-24.2024
Junling Kang, Shenshen Mo, Xiuqiong Shu, Shuang Cheng
{"title":"Effects of Baicalein Pretreatment on the NLRP3/GSDMD Pyroptosis Pathway and Neuronal Injury in Pilocarpine-Induced Status Epilepticus in the Mice.","authors":"Junling Kang, Shenshen Mo, Xiuqiong Shu, Shuang Cheng","doi":"10.1523/ENEURO.0319-24.2024","DOIUrl":"10.1523/ENEURO.0319-24.2024","url":null,"abstract":"<p><p>Status epilepticus (SE) links to high mortality and morbidity. Considering the neuroprotective property of baicalein (BA), we investigated its effects on post-SE neuronal injury via the NLRP3/GSDMD pathway. Mice were subjected to SE modeling and BA interference, with seizure severity and learning and memory abilities evaluated. The histological changes, neurological injury and neuron-specific enolase (NSE)-positive cell number in hippocampal CA1 region, and cell death were assessed. Levels of the NOD-, LRR-, and pyrin domain-containing 3 (NLRP3)/gasdermin-D (GSDMD) pathway-related proteins, inflammatory factors, and Iba-1 + NLRP3+ and Iba-1 + GSDMD-N+ cells were determined. BA ameliorated post-SE cognitive dysfunction and neuronal injury in mice, as evidenced by shortened escape latency, increased number of crossing the target quadrant within 60 s and the time staying in the target quadrant, alleviated hippocampal damage, increased viable cell number, decreased neuronal injury, and increased NSE-positive cells. Mechanistically, BA repressed microglial pyroptosis, reduced inflammatory factor release, and attenuated neuronal injury by inhibiting the NLRP3/GSDMD pathway. The NLRP3 inhibitor exerted similar effects as BA on SE mice, while the NLRP3 activator partially reversed BA-improved post-SE neuronal injury in mice. Conjointly, BA reduced microglial pyroptosis in hippocampal CA1 area by inhibiting the NLRP3/GSDMD pyroptosis pathway, thereby ameliorating post-SE neuronal injury in mice.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11728850/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142812424","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TrkB Agonist (7,8-DHF)-Induced Responses in Dorsal Root Ganglia Neurons Are Decreased after Spinal Cord Injury: Implication for Peripheral Pain Mechanisms. TrkB激动剂(7,8- dhf)诱导的脊髓损伤后背根神经节神经元反应减弱:外周疼痛机制的意义
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-03 Print Date: 2025-01-01 DOI: 10.1523/ENEURO.0219-24.2024
Kyeongran Jang, Sandra M Garraway
{"title":"TrkB Agonist (7,8-DHF)-Induced Responses in Dorsal Root Ganglia Neurons Are Decreased after Spinal Cord Injury: Implication for Peripheral Pain Mechanisms.","authors":"Kyeongran Jang, Sandra M Garraway","doi":"10.1523/ENEURO.0219-24.2024","DOIUrl":"10.1523/ENEURO.0219-24.2024","url":null,"abstract":"<p><p>Brain-derived neurotrophic factor (BDNF) and tropomyosin receptor kinase B (TrkB) are known to contribute to both protective and pronociceptive processes. However, their contribution to neuropathic pain after spinal cord injury (SCI) needs further investigation. In a recent study utilizing TrkB<sup>F616A</sup> mice, it was shown that systemic pharmacogenetic inhibition of TrkB signaling with 1NM-PP1 (1NMP) immediately after SCI delayed the onset of pain hypersensitivity, implicating maladaptive TrkB signaling in pain after SCI. To examine potential neural mechanisms underlying the behavioral outcome, patch-clamp recording was performed in small-diameter dissociated thoracic (T) dorsal root ganglia (DRG) neurons to evaluate TrkB signaling in uninjured mice and after T10 contusion SCI. Bath-applied 7,8-dihydroxyflavone (7,8-DHF), a selective TrkB agonist, induced a robust inward current in neurons from uninjured mice, which was attenuated by 1NMP treatment. SCI also decreased 7,8-DHF-induced current while increasing the latency to its peak amplitude. Western blot revealed a concomitant decrease in TrkB expression in DRGs adjacent to the spinal lesion. Analyses of cellular and membrane properties showed that SCI increased neuronal excitability, evident by an increase in resting membrane potential and the number of spiking neurons. However, SCI did not increase spontaneous firing in DRG neurons. These results suggest that SCI induced changes in TrkB activation in DRG neurons even though these alterations are likely not contributing to pain hypersensitivity by nociceptor hyperexcitability. Overall, this reveals complex interactions involving TrkB signaling and provides an opportunity to investigate other, presumably peripheral, mechanisms by which TrkB contributes to pain hypersensitivity after SCI.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":"12 1","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11728855/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142926522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Optical assay of the functional impact of cuprizone-induced demyelination and remyelination on interhemispheric neural communication in the anterior cingulate cortex via the corpus callosum. 铜皮质诱导的脱髓鞘和再髓鞘脱髓鞘对前扣带皮层经胼胝体的半球间神经通讯功能影响的光学分析。
IF 2.7 3区 医学
eNeuro Pub Date : 2025-01-02 DOI: 10.1523/ENEURO.0511-24.2024
Kyoka Tsukuda, Yoko Tominaga, Makiko Taketoshi, Michiko Miwa, Kentaro Nakashima, Takashi Tominaga
{"title":"Optical assay of the functional impact of cuprizone-induced demyelination and remyelination on interhemispheric neural communication in the anterior cingulate cortex via the corpus callosum.","authors":"Kyoka Tsukuda, Yoko Tominaga, Makiko Taketoshi, Michiko Miwa, Kentaro Nakashima, Takashi Tominaga","doi":"10.1523/ENEURO.0511-24.2024","DOIUrl":"https://doi.org/10.1523/ENEURO.0511-24.2024","url":null,"abstract":"<p><p>Cuprizone (CPZ) is a widely used toxin that induces demyelinating diseases in animal models, producing multiple sclerosis (MS)-like pathology in rodents. CPZ is one of the few toxins that triggers demyelination and subsequent remyelination following the cessation of its application. This study examines the functional consequences of CPZ-induced demyelination and the subsequent recovery of neural communication within the anterior cingulate cortex (ACC), with a particular focus on inter-hemispheric connectivity via the corpus callosum. By employing wide-field, high-speed, voltage-sensitive dye imaging, we were able to provide real-time mapping of neural activity in the ACC of CPZ-fed mice. Although we could not record physiological signals from the corpus callosum, the results demonstrated a notable impairment in inter-hemispheric connections within the ACC via the corpus callosum, with the most pronounced loss observed in a specific coronal slice among a series of slices examined. Notably, the latency of neural signal propagation remained largely unaltered despite connectivity loss, indicating that demyelination affects the extent, rather than the temporal dynamics, of neural communication. It is noteworthy that while functional connectivity appeared to recover fully after the cessation of CPZ, histological analysis revealed only partial recovery of myelination, indicating a discrepancy between functional and structural recovery. These findings enhance our understanding of how demyelination affects the ACC's role in orchestrating neural activity, particularly in light of the slice-specific nature of interhemispheric communication impairments. These findings offer new insights into MS pathology, particularly regarding the role of the corpus callosum in interhemispheric communication and potential therapeutic strategies.<b>Significance Statement</b> Cuprizone (CPZ) is widely used to model multiple sclerosis in rodents by inducing demyelination. While the demyelination effects of CPZ have been widely studied, this study explores CPZ's impact on the prefrontal cortex (PFC). Using voltage-sensitive dye imaging (VSDI), we identified disruptions in PFC connectivity within and between hemispheres in CPZ-fed mice, though signal timing remained unaffected. This finding suggests that demyelination impairs connectivity without slowing transmission speed. Remarkably, connectivity restoration aligned with brain remyelination, providing insights into recovery pathways in MS.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142921006","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
RNA Isoform Diversity in Human Neurodegenerative Diseases. 人类神经退行性疾病的RNA异构体多样性。
IF 2.7 3区 医学
eNeuro Pub Date : 2024-12-27 Print Date: 2024-12-01 DOI: 10.1523/ENEURO.0296-24.2024
Christine S Liu, Chris Park, Tony Ngo, Janani Saikumar, Carter R Palmer, Anis Shahnaee, William J Romanow, Jerold Chun
{"title":"RNA Isoform Diversity in Human Neurodegenerative Diseases.","authors":"Christine S Liu, Chris Park, Tony Ngo, Janani Saikumar, Carter R Palmer, Anis Shahnaee, William J Romanow, Jerold Chun","doi":"10.1523/ENEURO.0296-24.2024","DOIUrl":"10.1523/ENEURO.0296-24.2024","url":null,"abstract":"<p><p>Single-nucleus RNA-sequencing (snRNA-seq) has revealed new levels of cellular organization and diversity within the human brain. However, full-length mRNA isoforms are not resolved in typical snRNA-seq analyses using short-read sequencing that cannot capture full-length transcripts. Here we combine standard 10x Genomics short-read snRNA-seq with targeted PacBio long-read snRNA-seq to examine isoforms of genes associated with neurological diseases at the single-cell level from prefrontal cortex samples of diseased and nondiseased human brain, assessing over 165,000 cells. Samples from 25 postmortem donors with Alzheimer's disease (AD), dementia with Lewy bodies (DLB), or Parkinson's disease (PD), along with age-matched controls, were compared. Analysis of the short-read libraries identified shared and distinct gene expression changes across the diseases. The same libraries were then assayed using enrichment probes to target 50 disease-related genes followed by long-read PacBio sequencing, enabling linkage between cell type and isoform expression. Vast mRNA isoform diversity was observed in all 50 targeted genes, even those that were not differentially expressed in the short-read data. We also developed an informatics method for detection of isoform structural differences in novel isoforms versus the reference annotation. These data expand available single-cell datasets of the human prefrontal cortical transcriptome with combined short- and long-read sequencing across AD, DLB, and PD, revealing increased mRNA isoform diversity that may contribute to disease features and could potentially represent therapeutic targets for neurodegenerative diseases.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11693435/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142806378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Neonatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography. 新生儿脑损伤引发细胞生物地理学的特定生态位变化。
IF 2.7 3区 医学
eNeuro Pub Date : 2024-12-26 Print Date: 2024-12-01 DOI: 10.1523/ENEURO.0224-24.2024
Nareh Tahmasian, Min Yi Feng, Keon Arbabi, Bianca Rusu, Wuxinhao Cao, Bharti Kukreja, Asael Lubotzky, Michael Wainberg, Shreejoy J Tripathy, Brian T Kalish
{"title":"Neonatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography.","authors":"Nareh Tahmasian, Min Yi Feng, Keon Arbabi, Bianca Rusu, Wuxinhao Cao, Bharti Kukreja, Asael Lubotzky, Michael Wainberg, Shreejoy J Tripathy, Brian T Kalish","doi":"10.1523/ENEURO.0224-24.2024","DOIUrl":"10.1523/ENEURO.0224-24.2024","url":null,"abstract":"<p><p>Preterm infants are at risk for brain injury and neurodevelopmental impairment due, in part, to white matter injury following chronic hypoxia exposure. However, the precise molecular mechanisms by which neonatal hypoxia disrupts early neurodevelopment are poorly understood. Here, we constructed a brain-wide map of the regenerative response to newborn brain injury using high-resolution imaging-based spatial transcriptomics to analyze over 800,000 cells in a mouse model of chronic neonatal hypoxia. Additionally, we developed a new method for inferring condition-associated differences in cell type spatial proximity, enabling the identification of niche-specific changes in cellular architecture. We observed hypoxia-associated changes in region-specific cell states, cell type composition, and spatial organization. Importantly, our analysis revealed mechanisms underlying reparative neurogenesis and gliogenesis, while also nominating pathways that may impede circuit rewiring following neonatal hypoxia. Altogether, our work provides a comprehensive description of the molecular response to newborn brain injury.</p>","PeriodicalId":11617,"journal":{"name":"eNeuro","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2024-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11680506/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142834662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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