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Pili Assembled by the Chaperone/Usher Pathway in Escherichia coli and Salmonella. 大肠杆菌和沙门氏菌中通过伴侣/追随途径组装的纤毛。
EcoSal Plus Pub Date : 2018-03-01 DOI: 10.1128/ecosalplus.ESP-0007-2017
Glenn T Werneburg, David G Thanassi
{"title":"Pili Assembled by the Chaperone/Usher Pathway in <i>Escherichia coli</i> and <i>Salmonella</i>.","authors":"Glenn T Werneburg, David G Thanassi","doi":"10.1128/ecosalplus.ESP-0007-2017","DOIUrl":"10.1128/ecosalplus.ESP-0007-2017","url":null,"abstract":"<p><p>Gram-negative bacteria assemble a variety of surface structures, including the hair-like organelles known as pili or fimbriae. Pili typically function in adhesion and mediate interactions with various surfaces, with other bacteria, and with other types of cells such as host cells. The chaperone/usher (CU) pathway assembles a widespread class of adhesive and virulence-associated pili. Pilus biogenesis by the CU pathway requires a dedicated periplasmic chaperone and integral outer membrane protein termed the usher, which forms a multifunctional assembly and secretion platform. This review addresses the molecular and biochemical aspects of the CU pathway in detail, focusing on the type 1 and P pili expressed by uropathogenic <i>Escherichia coli</i> as model systems. We provide an overview of representative CU pili expressed by <i>E. coli</i> and <i>Salmonella</i>, and conclude with a discussion of potential approaches to develop antivirulence therapeutics that interfere with pilus assembly or function.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"8 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5940347/pdf/nihms936817.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"35911457","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pathogenesis of Proteus mirabilis Infection. 奇异变形杆菌感染的发病机制。
EcoSal Plus Pub Date : 2018-02-01 DOI: 10.1128/ecosalplus.ESP-0009-2017
Chelsie E Armbruster, Harry L T Mobley, Melanie M Pearson
{"title":"Pathogenesis of <i>Proteus mirabilis</i> Infection.","authors":"Chelsie E Armbruster, Harry L T Mobley, Melanie M Pearson","doi":"10.1128/ecosalplus.ESP-0009-2017","DOIUrl":"10.1128/ecosalplus.ESP-0009-2017","url":null,"abstract":"<p><p><i>Proteus mirabilis</i>, a Gram-negative rod-shaped bacterium most noted for its swarming motility and urease activity, frequently causes catheter-associated urinary tract infections (CAUTIs) that are often polymicrobial. These infections may be accompanied by urolithiasis, the development of bladder or kidney stones due to alkalinization of urine from urease-catalyzed urea hydrolysis. Adherence of the bacterium to epithelial and catheter surfaces is mediated by 17 different fimbriae, most notably MR/P fimbriae. Repressors of motility are often encoded by these fimbrial operons. Motility is mediated by flagella encoded on a single contiguous 54-kb chromosomal sequence. On agar plates, <i>P. mirabilis</i> undergoes a morphological conversion to a filamentous swarmer cell expressing hundreds of flagella. When swarms from different strains meet, a line of demarcation, a \"Dienes line,\" develops due to the killing action of each strain's type VI secretion system. During infection, histological damage is caused by cytotoxins including hemolysin and a variety of proteases, some autotransported. The pathogenesis of infection, including assessment of individual genes or global screens for virulence or fitness factors has been assessed in murine models of ascending urinary tract infections or CAUTIs using both single-species and polymicrobial models. Global gene expression studies performed in culture and in the murine model have revealed the unique metabolism of this bacterium. Vaccines, using MR/P fimbria and its adhesin, MrpH, have been shown to be efficacious in the murine model. A comprehensive review of factors associated with urinary tract infection is presented, encompassing both historical perspectives and current advances.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"8 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880328/pdf/nihms925686.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"35814536","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Test article. 测试的文章。
EcoSal Plus Pub Date : 2018-01-01 DOI: 10.1128/vishal-article2
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引用次数: 0
Test article3. 测试第三条。
EcoSal Plus Pub Date : 2018-01-01 DOI: 10.1128/vishal-article4
{"title":"Test article3.","authors":"","doi":"10.1128/vishal-article4","DOIUrl":"https://doi.org/10.1128/vishal-article4","url":null,"abstract":"","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"8 1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"63743024","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A Brief History of Shigella. 志贺氏菌简史。
EcoSal Plus Pub Date : 2018-01-01 DOI: 10.1128/ecosalplus.ESP-0006-2017
Keith A Lampel, Samuel B Formal, Anthony T Maurelli
{"title":"A Brief History of <i>Shigella</i>.","authors":"Keith A Lampel,&nbsp;Samuel B Formal,&nbsp;Anthony T Maurelli","doi":"10.1128/ecosalplus.ESP-0006-2017","DOIUrl":"https://doi.org/10.1128/ecosalplus.ESP-0006-2017","url":null,"abstract":"<p><p>The history of <i>Shigella</i>, the causative agent of bacillary dysentery, is a long and fascinating one. This brief historical account starts with descriptions of the disease and its impact on human health from ancient time to the present. Our story of the bacterium starts just before the identification of the dysentery bacillus by Kiyoshi Shiga in 1898 and follows the scientific discoveries and principal scientists who contributed to the elucidation of <i>Shigella</i> pathogenesis in the first 100 years. Over the past century, <i>Shigella</i> has proved to be an outstanding model of an invasive bacterial pathogen and has served as a paradigm for the study of other bacterial pathogens. In addition to invasion of epithelial cells, some of those shared virulence traits include toxin production, multiple-antibiotic resistance, virulence genes encoded on plasmids and bacteriophages, global regulation of virulence genes, pathogenicity islands, intracellular motility, remodeling of host cytoskeleton, inflammation/polymorphonuclear leukocyte signaling, apoptosis induction/inhibition, and \"black holes\" and antivirulence genes. While there is still much to learn from studying <i>Shigella</i> pathogenesis, what we have learned so far has also contributed greatly to our broader understanding of bacterial pathogenesis.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"8 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2018-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1128/ecosalplus.ESP-0006-2017","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"35723467","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 44
The Sec System: Protein Export in Escherichia coli. Sec 系统:大肠杆菌中的蛋白质输出。
EcoSal Plus Pub Date : 2017-11-01 DOI: 10.1128/ecosalplus.ESP-0002-2017
Jennine M Crane, Linda L Randall
{"title":"The Sec System: Protein Export in <i>Escherichia coli</i>.","authors":"Jennine M Crane, Linda L Randall","doi":"10.1128/ecosalplus.ESP-0002-2017","DOIUrl":"10.1128/ecosalplus.ESP-0002-2017","url":null,"abstract":"<p><p>In <i>Escherichia coli</i>, proteins found in the periplasm or the outer membrane are exported from the cytoplasm by the general secretory, Sec, system before they acquire stably folded structure. This dynamic process involves intricate interactions among cytoplasmic and membrane proteins, both peripheral and integral, as well as lipids. <i>In vivo</i>, both ATP hydrolysis and proton motive force are required. Here, we review the Sec system from the inception of the field through early 2016, including biochemical, genetic, and structural data.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"7 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5807066/pdf/nihms873862.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"35276236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Osmoregulated Periplasmic Glucans. Osmoregulated Periplasmic Glucans.
EcoSal Plus Pub Date : 2017-06-01 DOI: 10.1128/ecosalplus.ESP-0001-2017
Sébastien Bontemps-Gallo, Jean-Pierre Bohin, Jean-Marie Lacroix
{"title":"Osmoregulated Periplasmic Glucans.","authors":"Sébastien Bontemps-Gallo, Jean-Pierre Bohin, Jean-Marie Lacroix","doi":"10.1128/ecosalplus.ESP-0001-2017","DOIUrl":"10.1128/ecosalplus.ESP-0001-2017","url":null,"abstract":"<p><p>Among all the systems developed by enterobacteria to face osmotic stress, only osmoregulated periplasmic glucans (OPGs) were found to be modulated during osmotic fluxes. First detected in 1973 by E.P. Kennedy's group in a study of phospholipid turnover in <i>Escherichia coli</i>, OPGs have been shown across alpha, beta, and gamma subdivisions of the proteobacteria. Discovery of OPG-like compounds in the epsilon subdivision strongly suggested that the presence of periplasmic glucans is essential for almost all proteobacteria. This article offers an overview of the different classes of OPGs. Then, the biosynthesis of OPGs and their regulation in <i>E. coli</i> and other species are discussed. Finally, the biological role of OPGs is developed. Beyond structural function, OPGs are involved in pathogenicity, in particular, by playing a role in signal transduction pathways. Recently, OPG synthesis proteins have been suggested to control cell division and growth rate.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"7 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11575687/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"35070690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Regulation of Escherichia coli Pathogenesis by Alternative Sigma Factor N. 替代西格玛因子 N 对大肠杆菌致病机理的调控
EcoSal Plus Pub Date : 2017-06-01 DOI: 10.1128/ecosalplus.ESP-0016-2016
James T Riordan, Avishek Mitra
{"title":"Regulation of <i>Escherichia coli</i> Pathogenesis by Alternative Sigma Factor N.","authors":"James T Riordan, Avishek Mitra","doi":"10.1128/ecosalplus.ESP-0016-2016","DOIUrl":"10.1128/ecosalplus.ESP-0016-2016","url":null,"abstract":"<p><p>σ<sup>N</sup> (also σ<sup>54</sup>) is an alternative sigma factor subunit of the RNA polymerase complex that regulates the expression of genes from many different ontological groups. It is broadly conserved in the Eubacteria with major roles in nitrogen metabolism, membrane biogenesis, and motility. σ<sup>N</sup> is encoded as the first gene of a five-gene operon including <i>rpoN</i> (σ<sup>N</sup>), <i>ptsN</i>, <i>hpf</i>, <i>rapZ</i>, and <i>npr</i> that has been genetically retained among species of <i>Escherichia</i>, <i>Shigella</i>, and <i>Salmonella</i>. In an increasing number of bacteria, σ<sup>N</sup> has been implicated in the control of genes essential to pathogenic behavior, including those involved in adherence, secretion, immune subversion, biofilm formation, toxin production, and resistance to both antimicrobials and biological stressors. For most pathogens how this is achieved is unknown. In enterohemorrhagic <i>Escherichia coli</i> (EHEC) O157, <i>Salmonella enterica</i>, and <i>Borrelia burgdorferi</i>, regulation of virulence by σ<sup>N</sup> requires another alternative sigma factor, σ<sup>S</sup>, yet the model by which σ<sup>N</sup>-σ<sup>S</sup> virulence regulation is predicted to occur is varied in each of these pathogens. In this review, the importance of σ<sup>N</sup> to bacterial pathogenesis is introduced, and common features of σ<sup>N</sup>-dependent virulence regulation discussed. Emphasis is placed on the molecular mechanisms underlying σ<sup>N</sup> virulence regulation in <i>E. coli</i> O157. This includes a review of the structure and function of regulatory pathways connecting σ<sup>N</sup> to virulence expression, predicted input signals for pathway stimulation, and the role for cognate σ<sup>N</sup> activators in initiation of gene systems determining pathogenic behavior.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"7 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11575691/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"35106722","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Legacy of Genetic Analysis Advances Contemporary Research with Escherichia coli K-12 and Salmonella enterica serovar Typhimurium LT2. 遗传分析的遗产推动了对大肠杆菌 K-12 和伤寒沙门氏菌 LT2 的当代研究。
EcoSal Plus Pub Date : 2017-04-01 DOI: 10.1128/ecosalplus.ESP-0014-2016
Valley Stewart
{"title":"The Legacy of Genetic Analysis Advances Contemporary Research with <i>Escherichia coli</i> K-12 and <i>Salmonella enterica</i> serovar Typhimurium LT2.","authors":"Valley Stewart","doi":"10.1128/ecosalplus.ESP-0014-2016","DOIUrl":"10.1128/ecosalplus.ESP-0014-2016","url":null,"abstract":"<p><p><i>Escherichia coli</i> K-12 and <i>Salmonella enterica</i> serovar Typhimurium LT2 became standard organisms for genetic analysis during the Truman administration. Half a century later, genetic analysis with these strains had become an art form, interpreted through 23 articles in the ambitious two-volume masterpiece edited by the late Fred Neidhardt and colleagues. These legacy articles now are available through <i>EcoSal Plus</i>, so as to inform and inspire contemporary genetic analyses in these standard organisms and their relatives.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"7 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11575689/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34943184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Targeting and Insertion of Membrane Proteins. 膜蛋白的靶向和插入。
EcoSal Plus Pub Date : 2017-03-01 DOI: 10.1128/ecosalplus.ESP-0012-2016
Andreas Kuhn, Hans-Georg Koch, Ross E Dalbey
{"title":"Targeting and Insertion of Membrane Proteins.","authors":"Andreas Kuhn, Hans-Georg Koch, Ross E Dalbey","doi":"10.1128/ecosalplus.ESP-0012-2016","DOIUrl":"10.1128/ecosalplus.ESP-0012-2016","url":null,"abstract":"<p><p>The insertion and assembly of proteins into the inner membrane of bacteria are crucial for many cellular processes, including cellular respiration, signal transduction, and ion and pH homeostasis. This process requires efficient membrane targeting and insertion of proteins into the lipid bilayer in their correct orientation and proper conformation. Playing center stage in these events are the targeting components, signal recognition particle (SRP) and the SRP receptor FtsY, as well as the insertion components, the Sec translocon and the YidC insertase. Here, we will discuss new insights provided from the recent high-resolution structures of these proteins. In addition, we will review the mechanism by which a variety of proteins with different topologies are inserted into the inner membrane of Gram-negative bacteria. Finally, we report on the energetics of this process and provide information on how membrane insertion occurs in Gram-positive bacteria and Archaea. It should be noted that most of what we know about membrane protein assembly in bacteria is based on studies conducted in Escherichia coli.</p>","PeriodicalId":11500,"journal":{"name":"EcoSal Plus","volume":"7 2","pages":""},"PeriodicalIF":0.0,"publicationDate":"2017-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11575690/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"34797508","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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