Current Medical Mycology最新文献

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Evaluation of a newer (1, 3)-β-D-glucan chemiluminescent immunoassay for invasive candidiasis: A study from a tertiary care center. 一种新的(1,3)-β- d -葡聚糖化学发光免疫分析法对侵袭性念珠菌病的评价:一项来自三级保健中心的研究
Current Medical Mycology Pub Date : 2024-05-10 eCollection Date: 2024-01-01 DOI: 10.22034/cmm.2024.345199.1513
Sudesh Gourav, Gagandeep Singh, Lokesh Kashyap, Bhaskar Rana, Swet Raj, Immaculata Xess
{"title":"Evaluation of a newer (1, 3)-β-D-glucan chemiluminescent immunoassay for invasive candidiasis: A study from a tertiary care center.","authors":"Sudesh Gourav, Gagandeep Singh, Lokesh Kashyap, Bhaskar Rana, Swet Raj, Immaculata Xess","doi":"10.22034/cmm.2024.345199.1513","DOIUrl":"10.22034/cmm.2024.345199.1513","url":null,"abstract":"<p><strong>Background and purpose: </strong>Invasive candidiasis (IC) in the hospitalized population is one of the leading causes of invasive fungal infections (IFIs). Microbiological diagnosis of IC suffers due to poor sensitivity of blood culture and relative inaccessibility to more sensitive modalities. (1, 3)-β-D-glucan (BDG) is a cell wall polysaccharide found in a range of fungi. Various commercial assays are available based on various detection techniques. This study aimed to assess the diagnostic performance of the FungiXpert® Fungus BDG Detection Kit by Genobio Pharmaceutical Co. Ltd. (Tianjin, China), based on chemiluminescent method, for diagnosis of candidemia and deep-seated candidiasis.</p><p><strong>Materials and methods: </strong>In total, 80 patients (34 males and 46 females) were included with a median age of 35 years old. In accordance with EORTC/MSGERC definitions, 39 patients had proven IC. The number of patients within the probable, possible, and no IC (taken as control) groups were 8, 4, and 29, respectively. Blood samples were collected for fungal blood culture and BDG assay.</p><p><strong>Results: </strong>After exclusion of cases with evidence of concurrent IFI other than IC, median serum BDG was 0.63 ng/ml for proven IC; while it was 0.04 ng/ml for NO IC. Sensitivity, specificity, positive, and negative predictive values were 60.52%, 81.81%, 85.18%, and 54.54%, respectively. Positive likelihood ratio was 3.32. While the assay performed best for <i>Candida tropicalis</i> with median BDG of 1.92 ng/ml and sensitivity of 92.3%, its performance was worst for <i>Candida parapsilosis</i>, with median BDG of 0.04 ng/ml and sensitivity of 44.44%. Overall mortality rate was 65.62% in the BDG positive group, which was significantly higher than that in the BDG negative group (33.33%).</p><p><strong>Conclusion: </strong>The performance of the FungiXpert® Fungus BDG Detection Kit was acceptable for invasive candidiasis in the present resource-limited setup. The major advantages of this assay were the ease of performance in a semi-automated cartridge format, relatively lower cost per test, non-reliance on glucan-free procedures or instruments and minimal hands-on procedure.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11688587/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913903","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular identification of yeast communities isolated from nail specimens by PCR-RFLP and PCR-FSP methods. 用PCR-RFLP和PCR-FSP方法鉴定指甲标本中酵母菌群。
Current Medical Mycology Pub Date : 2024-05-07 eCollection Date: 2024-01-01 DOI: 10.22034/cmm.2024.345237.1539
Ahmad Jabrodini, Mitra Zaighami, Ali Khodadadi, Keyvan Pakshir, Hasti Nouraei, Hossein Khodadadi
{"title":"Molecular identification of yeast communities isolated from nail specimens by PCR-RFLP and PCR-FSP methods.","authors":"Ahmad Jabrodini, Mitra Zaighami, Ali Khodadadi, Keyvan Pakshir, Hasti Nouraei, Hossein Khodadadi","doi":"10.22034/cmm.2024.345237.1539","DOIUrl":"10.22034/cmm.2024.345237.1539","url":null,"abstract":"<p><strong>Background and purpose: </strong>Onychomycosis is a common fungal infection that affects the nails, caused by various fungal agents. Moreover, yeast onychomycosis has increased in recent years. Yeast isolates might not be identified at the species level by conventional methods, whereas molecular methods can identify yeast isolates more accurately. This study aimed to identify yeast communities isolated from nail specimens by polymerase chain reaction (PCR)-restriction fragment length polymorphism (RFLP) and PCR- fragment size polymorphism (FSP) methods.</p><p><strong>Materials and methods: </strong>This experimental study was conducted on archival yeast isolates obtained from 269 patients suspected of onychomycosis who referred to the Medical Mycology Laboratory at Shiraz University of Medical Sciences in Shiraz, Iran, between April 2022 and March 2023. Onychomycosis was confirmed through direct examination and culture of nail specimens. The PCR-RFLP and PCR-FSP methods were used to identify yeast isolates.</p><p><strong>Results: </strong>In total, 78 (28.99%) yeast strains were identified. <i>Candida albicans</i> was the most common species, followed by <i>Candida parapsilosis</i> complex and <i>Candida tropicalis</i>. Uncommon species of yeasts, such as <i>Candida utilis</i>, <i>Candida pararugosa</i>, <i>Candida nivariensis</i>, and <i>Rhodotorula rubra</i> were identified by molecular methods. The PCR-FSP method showed a strong agreement with the PCR-RFLP method in the identification of common yeast agents causing onychomycosis (κ=0.84).</p><p><strong>Conclusion: </strong>It seems necessary to use molecular diagnostic tools in addition to conventional methods to identify yeast isolates in clinical laboratories. The rapid and accurate identification of fungal agents causing onychomycosis is useful for the selection of an appropriate treatment strategy.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":"e2024.345184.1539"},"PeriodicalIF":0.0,"publicationDate":"2024-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11688582/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913556","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Candida utilis as an emerging rare cause of septicemia among neonates and children in Western Uttar Pradesh: A case series. 念珠菌作为一个新兴的罕见原因败血症在新生儿和儿童在北方邦西部:一个案例系列。
Current Medical Mycology Pub Date : 2024-05-07 eCollection Date: 2024-01-01 DOI: 10.22034/cmm.2024.345218.1529
Dharmendra Prasad Singh, Rajesh Kumar Verma, Rajesh Kumar Yadav, Ketan Anant, Anupam Das
{"title":"<i>Candida utilis</i> as an emerging rare cause of septicemia among neonates and children in Western Uttar Pradesh: A case series.","authors":"Dharmendra Prasad Singh, Rajesh Kumar Verma, Rajesh Kumar Yadav, Ketan Anant, Anupam Das","doi":"10.22034/cmm.2024.345218.1529","DOIUrl":"10.22034/cmm.2024.345218.1529","url":null,"abstract":"<p><strong>Background and purpose: </strong><i>Candida utilis</i> is a recently emerging nosocomial fungal pathogen. Candidemia is the fourth most prevalent cause of bloodstream Infections with mortality rates varying from 5-71%.</p><p><strong>Materials and methods: </strong>This was a retrospective study conducted at Uttar Pradesh University of Medical Sciences, Etawah, India, from September 2023 to February 2024. Rapid identification was performed by VITEK® 2 (BioMérieux, France) and 18 out of 20 <i>C. utilis</i> cases were verified by matrix assisted laser desorption ionization-time of flight mass spectrometry (BioMerieux, France). Susceptibility testing was conducted by VITEK® 2 appropriate Card.</p><p><strong>Results: </strong><i>Candida utilis</i> was mainly observed between 0-9-month-old neonates, except one case of 11 years old. The extended Intensive Care Unit stay and prior antibiotic use were common risk factors in all cases. They were pan susceptible to each of the tested antifungal medications, and 6 out of 10 cases showed positive clinical response after antifungal treatment.</p><p><strong>Conclusion: </strong>Early identification and prompt treatment favors a good clinical outcome. The current research primarily aimed to elaborate on the speciation, incidence, and antifungal susceptibility testing of <i>C. utilis</i> at a tertiary care center.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":"e2024.345184.1529"},"PeriodicalIF":0.0,"publicationDate":"2024-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11688595/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913898","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Northwest Iranian dermatophyte isolates: anthropophilic and geophilic. 伊朗西北部的皮癣菌分离株:嗜人和嗜地。
Current Medical Mycology Pub Date : 2024-05-07 eCollection Date: 2024-01-01 DOI: 10.22034/CMM.2024.345232.1535
Kambiz Diba, Kosar Jafari, Kasra Alizadeh, Narges Aslani
{"title":"Northwest Iranian dermatophyte isolates: anthropophilic and geophilic.","authors":"Kambiz Diba, Kosar Jafari, Kasra Alizadeh, Narges Aslani","doi":"10.22034/CMM.2024.345232.1535","DOIUrl":"10.22034/CMM.2024.345232.1535","url":null,"abstract":"<p><strong>Background and purposes: </strong>The fungi known as dermatophytes are a group of keratinophilic agents responsible for superficial infections in humans and animals. Recognition of the species distribution and epidemiology of dermatophytosis may be helpful in the prevention and improve prophylactic measures. The present molecular epidemiology study sought to investigate the incidence of etiological agents causing dermatophytosis.</p><p><strong>Materials and methods: </strong>The morphologic methods and polymerase chain reaction-restriction fragment length polymorphism using <i>MvaI</i> restriction enzyme were performed to identify dermatophytes isolated from the soil, compost, and clinical samples.</p><p><strong>Results: </strong>Based on findings, 39 (8.1%) clinical specimens and 10 (8.2%) environmental samples were morphologically and molecularly identified as dermatophytes. In the clinical samples, <i>Trichophyton mentagrophytes</i>/<i>T. interdigitale</i> species complex was isolated with the highest incidence rate. The dermatophytes comprise seven species of the four genera, viz., <i>T. interdigitale</i> (currently <i>T. mentagrophytes</i>, n=15, 40.5%), Microsporum canis (n=10, 27%), <i>T. verrucosum</i> (n=5, 13.5%), <i>T. rubrum</i> (n=4, 10.8%), <i>Myriodontium keratinophilum</i> (n=2, 5.4%), and <i>T. benhamiae</i> (n=1, 2.7%). The geophilic identified species included <i>Nannizzia gypsea</i> (n=5), <i>Arthroderma multifidum</i> (n=2), <i>Afanoascus flavisence</i> (n=2), and <i>Nannizzia fulva</i> (n=1).</p><p><strong>Conclusion: </strong>The current study provides a diverse overview of dermatophytes in the northwest of Iran to improve their surveillance. The present investigation of clinical specimens revealed that <i>Myriodontium keratinophilum</i>, as a species rarely detected with keratolytic properties, emerged as a causative agent of dermatophytosis.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":"e2024.345184.1535"},"PeriodicalIF":0.0,"publicationDate":"2024-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11688585/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913653","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Candida glabrata meningitis in a patient with newly diagnosed acquired immunodeficiency syndrome from Sikkim, India. 印度锡金新诊断的获得性免疫缺陷综合征患者的光秃念珠菌脑膜炎。
Current Medical Mycology Pub Date : 2024-05-07 eCollection Date: 2024-01-01 DOI: 10.22034/CMM.2024.345242.1542
Sunu Hangma Subba, Tara Devi Sharma, Yeshi Palden Dopthapa, Ugen Gyatso N Bhutia, Rekha Sharma
{"title":"<i>Candida glabrata</i> meningitis in a patient with newly diagnosed acquired immunodeficiency syndrome from Sikkim, India.","authors":"Sunu Hangma Subba, Tara Devi Sharma, Yeshi Palden Dopthapa, Ugen Gyatso N Bhutia, Rekha Sharma","doi":"10.22034/CMM.2024.345242.1542","DOIUrl":"10.22034/CMM.2024.345242.1542","url":null,"abstract":"<p><strong>Background and purpose: </strong><i>Candida</i> infections in India have shifted, with an increase in the incidence rate of invasive candidiasis, particularly due to non-<i>albicans</i> species. The central nervous system infections by <i>Candida glabrata</i> are sparsely reported and more understanding and research is needed regarding these infections.</p><p><strong>Case report: </strong>This study reported an unusual case of <i>C. glabrata</i> meningitis in a middle-aged female with pulmonary tuberculosis and newly diagnosed acquired immunodeficiency syndrome with a low cluster of differentiation 4 count (12 cells/mm<sup>3</sup>). Initially, the patient was treated with fluconazole. Subsequently, the patient underwent therapy involving amphotericin B and flucytosine. The cerebrospinal fluid cultures eventually grew <i>C. glabrata</i>, confirmed by matrix-assisted laser desorption ionization time-of-flight analysis. Despite switching to amphotericin B and flucytosine, the conditions of the patient deteriorated, leading to her death.</p><p><strong>Conclusion: </strong><i>Candida glabrata</i> candidemia requires meticulous and vigilant management due to its high mortality rate and relatively higher resistance to azoles, particularly fluconazole. This case underscored the severe and pressing challenges in the management of <i>C. glabrata</i> meningitis, particularly in immunocompromised patients.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":"e2024.345242.1542"},"PeriodicalIF":0.0,"publicationDate":"2024-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11688584/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913897","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dorema kopetdaghense Pimenov: A potent antifungal medicinal plant. 一种有效的抗真菌药用植物。
Current Medical Mycology Pub Date : 2024-05-07 eCollection Date: 2024-01-01 DOI: 10.22034/cmm.2024.345183.1499
Abolfazl Shakeri, Aliakbar Mashhadi Esmaeilabadi, Vahid Soheili, Javad Mottaghipisheh, Seyed Ahmad Emami, Javad Akhtari, Zahra Tayarani-Najaran
{"title":"<i>Dorema kopetdaghense</i> Pimenov: A potent antifungal medicinal plant.","authors":"Abolfazl Shakeri, Aliakbar Mashhadi Esmaeilabadi, Vahid Soheili, Javad Mottaghipisheh, Seyed Ahmad Emami, Javad Akhtari, Zahra Tayarani-Najaran","doi":"10.22034/cmm.2024.345183.1499","DOIUrl":"10.22034/cmm.2024.345183.1499","url":null,"abstract":"<p><strong>Background and purpose: </strong><i>Dorema</i> species are well-known antifungal medicinal plants. <i>Dorema kopetdaghense</i> (Apiaceae family) is a rarely investigated plant endemic to Iran. The present study aimed to assess the antifungal, antibacterial, antioxidant, and cytotoxic activities of root extracts of different plants.</p><p><strong>Materials and methods: </strong>The methanolic crude extract (MeOH) and its sub-fractions, including petroleum ether (PE), dichloromethane (DCM), ethyl acetate (EtOAc), and n-butanol (n-BuOH) were prepared.</p><p><strong>Results: </strong>Results from the antifungal and antibacterial activities of fractions indicated remarkable antifungal effects against <i>Candida albicans</i> with minimum inhibitory concentration and minimum bactericidal concentration values of 10 µg/mL; however, no cytotoxicity was observed in the case of selected cancer cells. Moreover, methanolic soluble fractions showed good antiradical effects evaluated <i>via</i> DPPH and <i>β</i>-carotene bleaching tests possessing half-maximal inhibitory concentration (IC<sub>50</sub>) of 20.11 and 41.32 µg/mL, respectively, though it was less effective than positive controls ascorbic acid (8.47 and 31.71 µg/mL, respectively) and butylated hydroxytoluene (IC<sub>50</sub>: 10.29 and 33.55 µg/mL, respectively).</p><p><strong>Conclusion: </strong>It can be concluded that strong antifungal and antioxidant activities without notable cytotoxicity, suggest the potential safety of the plant to be used as a natural antifungal remedy as well as a preservative in the food industry.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11686930/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913899","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Standardization of polymerase chain reaction for detection of fluconazole resistance targeting Y132F mutation in ERG11 gene in Candida parapsilosis. 聚合酶链反应标准化检测假丝酵母菌ERG11基因Y132F突变氟康唑耐药
Current Medical Mycology Pub Date : 2024-05-07 eCollection Date: 2024-01-01 DOI: 10.22034/cmm.2024.345209.1517
Kanagasabapathi Karthika, Thayanidhi Premamalini, Thanneru Vijayakishore, Anupama Jyoti Kindo
{"title":"Standardization of polymerase chain reaction for detection of fluconazole resistance targeting Y132F mutation in <i>ERG11</i> gene in <i>Candida parapsilosis</i>.","authors":"Kanagasabapathi Karthika, Thayanidhi Premamalini, Thanneru Vijayakishore, Anupama Jyoti Kindo","doi":"10.22034/cmm.2024.345209.1517","DOIUrl":"10.22034/cmm.2024.345209.1517","url":null,"abstract":"<p><strong>Background and purpose: </strong><i>Candida parapsilosis</i> is the third most commonly isolated species from candidemia patients admitted to Indian intensive care units. Outbreak of infection and emergence of fluconazole resistance associated with this particular species has been increasingly documented since 2018. Worldwide data has documented that Y132F substitution in the <i>ERG11</i> gene is the predominant fluconazole resistance mechanism among <i>C parapsilosis</i>. Hence, this study aimed to detect fluconazole resistance by targeting Y132F mutation in the <i>ERG11</i> gene in <i>C. parapsilosis</i>, by conventional polymerase chain reaction (PCR) assay with in-house designed primers.</p><p><strong>Materials and methods: </strong>A total of 75 <i>Candida</i> isolates were collected from candidemia patients (Jan-Dec 2023). All the <i>Candida</i> isolates were subjected to phenotypic and genotypic characterization. PCR-restriction fragment length polymorphism was performed for identification and confirmation of <i>C. parapsilosis</i> isolates. The antifungal susceptibility testing by broth microdilution method was performed according to the Clinical and Laboratory Standards Institute guidelines (M27-A3) for all <i>C. parapsilosis</i> against fluconazole, itraconazole, voriconazole, and posaconazole to determine their minimum inhibitory concentration (MIC) values. <i>Candida parapsilosis</i>-specific PCR assay was developed with in-house designed primers to detect Y132F mutation in the <i>ERG11</i> gene.</p><p><strong>Results: </strong>In this study, among 75 candidemia patients (Jan-Dec 2023), about 24% of the candidemia was caused by <i>C. parapsilosis</i>. Fluconazole resistance among <i>C. parapsilosis</i> was found to be 16.7% with a MIC range of 32-64 µg/ml. The PCR assay successfully identified all three fluconazole-resistant <i>C. parapsilosis</i> with Y132F mutation, thereby confirming the PCR results. Furthermore, validation of the presence and absence of Y132F mutation in resistant and susceptible isolates by DNA sequencing showed that the results were in concordance with our PCR assay.</p><p><strong>Conclusion: </strong>The developed PCR assay successfully detected the Y132F mutation within 3 h. This assay can be useful for early detection of fluconazole-resistant <i>C. parapsilosis</i> isolates in candidemia patients, which helps the provision of early antifungal treatment for better patient management.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11686929/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Divergent paths: CAP59 gene evolution in Cryptococcus and implications for pathogenicity. 不同的路径:隐球菌的CAP59基因进化及其致病性。
Current Medical Mycology Pub Date : 2024-04-15 eCollection Date: 2024-01-01 DOI: 10.22034/cmm.2024.345180.1496
Noor Maath Ahmed, Ahmed AbdulJabbar Suleiman
{"title":"Divergent paths: <i>CAP59</i> gene evolution in Cryptococcus and implications for pathogenicity.","authors":"Noor Maath Ahmed, Ahmed AbdulJabbar Suleiman","doi":"10.22034/cmm.2024.345180.1496","DOIUrl":"10.22034/cmm.2024.345180.1496","url":null,"abstract":"<p><strong>Background and purpose: </strong><i>Cryptococcus neoformans</i> and <i>Cryptococcus gattii</i> are highly virulent species that cause diseases, such as meningoencephalitis and pulmonary infections. The <i>CAP59</i> gene predominantly determines the virulence of the pathogenic species. This study aimed to examine <i>CAP59</i> in both pathogenic and non-pathogenic species.</p><p><strong>Materials and methods: </strong>This study identified <i>Cryptococcus</i> species through extensive literature, retrieved sequences from UniProt, explored protein families utilizing InterPro, motif analysis by MEME, multiple sequence alignment using Clustal Omega, performance of the phylogenetic analysis with MEGA, modeled protein structures with MODELLER, and separately visualized pathogenic and non-pathogenic structures in PyMOL.</p><p><strong>Results: </strong>Motif analysis showed four conserved regions between the pathogenic and non-pathogenic sequences. Moreover, multiple sequence alignment revealed that pathogenic <i>CAP59</i> gene sequences lacked a significant portion, compared to non-pathogenic ones, with several mutations in the gene sequence of pathogenic species <i>CAP59</i> at highly conserved regions. The phylogenetic analysis and pairwise distance matrix revealed that <i>Cryptococcus amylolentus</i> is closely related to pathogenic species. Predicted <i>CAP59</i> protein structures were superimposed to show structural differences between pathogenic and non-pathogenic species.</p><p><strong>Conclusion: </strong>In conclusion, the results suggested that non-pathogenic species may have evolved into pathogenic species since the <i>CAP59</i> gene sequences of the non-virulent species were longer than those of the virulent species sequences. It implies that the virulent sequences may have lost that region at some point in evolution, which additional research on capsule formation-related genes can further corroborate.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11686932/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular characterization of non-Cryptococcus yeast communities isolated from Eucalyptus trees. 桉树非隐球菌酵母群落的分子特征。
Current Medical Mycology Pub Date : 2024-03-29 eCollection Date: 2024-01-01 DOI: 10.22034/CMM.2024.345184.1500
Hasti Nouraei, Fatemeh Gharechahi, Zahra Zareshahrabadi, Kamiar Zomorodian, Alireza Gharavi, Hossein Khodadadi, Saham Ansari, Neda Amirzadeh, Keyvan Pakshir
{"title":"Molecular characterization of non-<i>Cryptococcus</i> yeast communities isolated from <i>Eucalyptus</i> trees.","authors":"Hasti Nouraei, Fatemeh Gharechahi, Zahra Zareshahrabadi, Kamiar Zomorodian, Alireza Gharavi, Hossein Khodadadi, Saham Ansari, Neda Amirzadeh, Keyvan Pakshir","doi":"10.22034/CMM.2024.345184.1500","DOIUrl":"10.22034/CMM.2024.345184.1500","url":null,"abstract":"<p><strong>Background and purpose: </strong>Plants are crucial habitats for fungus communities as they provide an appropriate physical environment for the growth and reproduction of the yeast microbiome. Varieties of pathogenic and non-pathogenic yeast could be found in <i>Eucalyptus</i> trees. Although <i>Cryptococcus</i> species are the most common pathogenic yeasts associated with <i>Eucalyptus</i> trees, other yeasts also grow on trees and are critical to human health. This study aimed to identify the yeast species associated with <i>Eucalyptus</i> trees.</p><p><strong>Materials and methods: </strong>In total, 107 yeast species were collected from <i>Eucalyptus</i> trees and subsequently identified through both molecular and traditional techniques. Genomic DNA extraction was performed using the boiling method. The internal transcribed spacer region of the ribosomal DNA was amplified utilizing the polymerase chain reaction (PCR) technique, followed by the purification and sequencing of the PCR products to identify the isolates.</p><p><strong>Results: </strong>Yeast strains belonged to 12 genera and 26 species of both the <i>Ascomycete</i> and <i>Basidiomycete</i> phyla. The most frequent species were <i>Rhodotorula mucilaginosa</i> (24.2%), <i>Candida tropicalis</i> (15%), <i>Candida guilliermondii</i> (11.2%), and <i>Aureobasidium pullulans</i> (10.2%).</p><p><strong>Conclusion: </strong>In this study, most of the yeast isolates, such as <i>Candida</i> and <i>Trichosporon</i>, were important to human health. <i>Eucalyptus</i> trees, as part of the natural flora, could be considered an environmental reservoir for yeasts, in which they can survive, disperse to the surrounding environment, and become a potential infectious source affecting public health.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"10 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11686939/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142913106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of exoenzyme profiles of Candida albicans species isolated from females with vaginal candidiasis. 评估从患有阴道念珠菌病的女性体内分离出的白色念珠菌外酶谱。
Current Medical Mycology Pub Date : 2023-12-01 DOI: 10.22034/cmm.2024.345112.1451
Hasti Nouraei, Leila Razeghian Jahromi, Mehdi Ghaderian Jahromi, Kamiar Zomorodian, Keyvan Pakshir
{"title":"Evaluation of exoenzyme profiles of <i>Candida albicans</i> species isolated from females with vaginal candidiasis.","authors":"Hasti Nouraei, Leila Razeghian Jahromi, Mehdi Ghaderian Jahromi, Kamiar Zomorodian, Keyvan Pakshir","doi":"10.22034/cmm.2024.345112.1451","DOIUrl":"10.22034/cmm.2024.345112.1451","url":null,"abstract":"<p><strong>Background and purpose: </strong>The three most common causes of vaginitis are bacteria, yeast, and Protozoa. <i>Candida albicans</i> is one of the most common causes of vaginitis and commonly affects millions of females with different signs and symptoms. Secretion of exoenzymes from <i>Candida</i> species plays an important role in virulence and pathogenesis. Increasing our knowledge about the pathogenesis of candidiasis could help to design new anti-<i>Candida</i> drugs. This study aimed to evaluate the phospholipase, esterase, and hemolysin activities of the vaginal <i>Candida</i> isolates and their correlation with the presence of vulvovaginal candidiasis.</p><p><strong>Materials and methods: </strong>In total, 119 <i>Candida albicans</i> isolates from vaginal candidiasis were enrolled in the study. Egg yolk agar, Tween 80 opacity medium, and blood agar plate assays were used for the determination of phospholipase, esterase, and hemolytic activities, respectively.</p><p><strong>Results: </strong>Based on the findings, 110 (92.44%) isolates showed phospholipase activity, 93 (78.2%) isolates were esterase producers, and 90 (75.6%) species had hemolytic activity.</p><p><strong>Conclusion: </strong>This study showed that most of the tested isolates had different enzymatic patterns. Discrimination of variations in the production of these exoenzymes among different <i>Candida</i> isolates may depend on <i>Candida</i> spp. pathogenicity and could be responsible for the severity of symptoms among the patients.</p>","PeriodicalId":10863,"journal":{"name":"Current Medical Mycology","volume":"9 4","pages":"51-54"},"PeriodicalIF":0.0,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11230141/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141562893","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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