Cellular and molecular bioengineering最新文献

筛选
英文 中文
How to Thrive as a First-Generation College Student in Engineering. 作为第一代工科大学生如何茁壮成长。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-08-01 DOI: 10.1007/s12195-022-00736-w
Emily D Fabiano
{"title":"How to Thrive as a First-Generation College Student in Engineering.","authors":"Emily D Fabiano","doi":"10.1007/s12195-022-00736-w","DOIUrl":"https://doi.org/10.1007/s12195-022-00736-w","url":null,"abstract":"<p><p>First-generation college students face unique challenges compared to non-first-generation college students, especially in STEM fields. First-generation STEM students drop out of their major at higher rates than non-first-generation students. This may be due to a lack of role models or mentorship in the college environment or in the field, a challenging curriculum, and difficulty balancing personal and academic commitments. There has been a lack of significant attention given to studying first-generation college students in undergraduate engineering, and therefore, there is limited understanding of how to navigate post-secondary education as a first-generation college student to succeed in undergraduate engineering. Here, I lay out tips for success based on my own experience as a first-generation student in engineering. This includes how to find the right major for you, adjust to college, have a solid support system, seek out research opportunities, become involved in outreach, experience inclusivity, balance courses with other commitments, and apply for scholarships. This article also discusses considerations in pursuing graduate education. With more support, mentoring and guidance, a greater percentage of first-generation students will succeed in pursuing undergraduate engineering degrees.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9474774/pdf/12195_2022_Article_736.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10492934","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Structural Mapping of BMP Conformational Epitopes and Bioengineering Design of Osteogenic Peptides to Specifically Target the Epitope-Binding Sites. BMP构象表位的结构定位和特异性靶向表位结合位点的成骨肽的生物工程设计。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-08-01 DOI: 10.1007/s12195-022-00725-z
Hao Chen, Yaodong Zhou, Qirong Dong
{"title":"Structural Mapping of BMP Conformational Epitopes and Bioengineering Design of Osteogenic Peptides to Specifically Target the Epitope-Binding Sites.","authors":"Hao Chen,&nbsp;Yaodong Zhou,&nbsp;Qirong Dong","doi":"10.1007/s12195-022-00725-z","DOIUrl":"https://doi.org/10.1007/s12195-022-00725-z","url":null,"abstract":"<p><strong>Introduction: </strong>Human bone morphogenetic proteins (BMPs) constitute a large family of cytokines related to members of the transforming growth factor-β superfamily, which fulfill biological functions by specificity binding to their cognate type I (BRI) and type II (BRII) receptors through conformational wrist and linear knuckle epitopes, respectively.</p><p><strong>Methods and results: </strong>We systematically examined the intermolecular recognition and interaction between the BMP proteins and BRI receptor at structural, energetic and dynamic levels. The BRI-binding site consists of three hotspot regions on BMP surface, which totally contribute ~70% potency to the BMP-BRI binding events and represent the core sections of BMP conformational wrist epitope; the contribution increases in the order: hotspot 2 (~ 8%) < hotspot 3 (~ 20%) < hotspot 1 (~ 40%). Multiple sequence alignment and structural superposition revealed a consensus sequence pattern and a similar binding mode of the three hotspots shared by most BMP members, indicating a high conservation of wrist epitope in BMP family. The three hotspots are natively folded into wellstructured <i>U</i>-shaped,, loop and double-stranded conformations in BMP proteins, which, however, would become largely disordered when splitting from the protein context to derive osteogenic peptides in free state, thus largely impairing their rebinding capability to BRI receptor. In this respect, cyclization strategy was employed to constrain hotspot 1/3-derived peptides into a native-like conformation, which was conducted by adding a disulfide bond across the ending arms of linear peptides based on their native conformations. Fluorescence-based assays substantiated that the cyclization can effectively improve the binding affinities of osteogenic peptides to BRI receptor by 3-6-fold. The cyclic peptides also exhibit a good selectivity for BRI over BRII (> 5-fold), confirming that they can specifically target the wrist epitope-binding site of BRI receptor.</p><p><strong>Conclusion: </strong>The rationally designed cyclic peptides can be regarded as the promising lead entities that should be further chemically modified to enhance their in vivo biological stability for further bioengineering therapeutic osteogenic peptides against chondrocyte senescence and bone disorder.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9474794/pdf/12195_2022_Article_725.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9416442","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Mechanotransduction in Endothelial Cells in Vicinity of Cancer Cells. 内皮细胞在癌细胞附近的机械转导。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-08-01 DOI: 10.1007/s12195-022-00728-w
Alessandra Ebben, Mahsa Dabagh
{"title":"Mechanotransduction in Endothelial Cells in Vicinity of Cancer Cells.","authors":"Alessandra Ebben,&nbsp;Mahsa Dabagh","doi":"10.1007/s12195-022-00728-w","DOIUrl":"https://doi.org/10.1007/s12195-022-00728-w","url":null,"abstract":"<p><p><i>Introduction</i>-Local hemodynamics impact the mechanotransduction in endothelial cells (ECs) lining the vascular network. On the other hand, cancer cells are shown to influence the local hemodynamics in their vicinity, in microvasculature. The first objective of present study is to explore how cancer cell-induced changes in local hemodynamics can impact the forces experienced by intra/inter-cellular organelles of ECs that are believed to play important roles in mechanotransduction. Moreover, extracellular matrix (ECM) stiffening has been shown to correlate with progression of most cancer types. However, it is still not well understood how ECM stiffness impacts ECs mechanosensors. The second objective of this study is to elucidate the role of ECM stiffness on mechanotransduction in ECs. <i>Methods</i>-A three-dimensional, multiscale, multicomponent, viscoelastic model of focally adhered ECs is developed to simulate the force transmission through ECs mechanosensors [actin cortical layer, nucleus, cytoskeleton, focal adhesions (FAs), and adherens junctions (ADJs)]. <i>Results</i>-Our results show that cancer cell-altered hemodynamics results in significantly high forces transmitted to subcellular organelles of ECs which are in vicinity of cancer cells. This impact is more drastic on stress fibers (SFs) both centrally located and peripheral ones. Furthermore, we demonstrate that ADJs, FAs, and SFs experience higher stresses in ECs attached to stiffer ECM. Impact of ECM stiffness is particularly significant in ECs exposed to fluid shear stresses of 2 Pa or lower. This finding reveals the role of organ-specific stiffness in promoting cancer cell transmigration even in capillaries larger than cancer cell diameter. <i>Conclusions</i>-ÊCancer cell-induced-changes in ECs mechanotransduction represents an important potential mechanism for cancer cell transmigration in the microvasculature particularly with stiffer ECM. The identification of ECs mechanosensors involved in early stages of EC-cancer cell interaction will help with developing more efficient therapeutic interventions to suppress cancer cell transmigration in the microvasculature.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9474981/pdf/12195_2022_Article_728.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9808877","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Leadership Lessons Learned in Biomedical Engineering. 生物医学工程中的领导力课程。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-08-01 DOI: 10.1007/s12195-022-00732-0
Michael R King
{"title":"Leadership Lessons Learned in Biomedical Engineering.","authors":"Michael R King","doi":"10.1007/s12195-022-00732-0","DOIUrl":"https://doi.org/10.1007/s12195-022-00732-0","url":null,"abstract":"","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9474766/pdf/12195_2022_Article_732.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10401493","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ibrutinib Inhibits BMX-Dependent Endothelial VCAM-1 Expression In Vitro and Pro-Atherosclerotic Endothelial Activation and Platelet Adhesion In Vivo. 伊鲁替尼体外抑制bmx依赖性内皮细胞VCAM-1表达和体内促动脉粥样硬化内皮细胞活化和血小板粘附。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-06-01 DOI: 10.1007/s12195-022-00723-1
Tia C L Kohs, Sven R Olson, Jiaqing Pang, Kelley R Jordan, Tony J Zheng, Aris Xie, James Hodovan, Matthew Muller, Carrie McArthur, Jennifer Johnson, Bárbara B Sousa, Michael Wallisch, Paul Kievit, Joseph E Aslan, João D Seixas, Gonçalo J L Bernardes, Monica T Hinds, Jonathan R Lindner, Owen J T McCarty, Cristina Puy, Joseph J Shatzel
{"title":"Ibrutinib Inhibits BMX-Dependent Endothelial VCAM-1 Expression <i>In Vitro</i> and Pro-Atherosclerotic Endothelial Activation and Platelet Adhesion <i>In Vivo</i>.","authors":"Tia C L Kohs,&nbsp;Sven R Olson,&nbsp;Jiaqing Pang,&nbsp;Kelley R Jordan,&nbsp;Tony J Zheng,&nbsp;Aris Xie,&nbsp;James Hodovan,&nbsp;Matthew Muller,&nbsp;Carrie McArthur,&nbsp;Jennifer Johnson,&nbsp;Bárbara B Sousa,&nbsp;Michael Wallisch,&nbsp;Paul Kievit,&nbsp;Joseph E Aslan,&nbsp;João D Seixas,&nbsp;Gonçalo J L Bernardes,&nbsp;Monica T Hinds,&nbsp;Jonathan R Lindner,&nbsp;Owen J T McCarty,&nbsp;Cristina Puy,&nbsp;Joseph J Shatzel","doi":"10.1007/s12195-022-00723-1","DOIUrl":"https://doi.org/10.1007/s12195-022-00723-1","url":null,"abstract":"<p><strong>Introduction: </strong>Inflammatory activation of the vascular endothelium leads to overexpression of adhesion molecules such as vascular cell adhesion molecule-1 (VCAM-1), contributing to the pro-thrombotic state underpinning atherogenesis. While the role of TEC family kinases (TFKs) in mediating inflammatory cell and platelet activation is well defined, the role of TFKs in vascular endothelial activation remains unclear. We investigated the role of TFKs in endothelial cell activation <i>in vitro</i> and in a nonhuman primate model of diet-induced atherosclerosis <i>in vivo</i>.</p><p><strong>Methods and results: </strong><i>In vitro</i>, we found that ibrutinib blocked activation of the TFK member, BMX, by vascular endothelial growth factors (VEGF)-A in human aortic endothelial cells (HAECs). Blockade of BMX activation with ibrutinib or pharmacologically distinct BMX inhibitors eliminated the ability of VEGF-A to stimulate VCAM-1 expression in HAECs. We validated that treatment with ibrutinib inhibited TFK-mediated platelet activation and aggregation in both human and primate samples as measured using flow cytometry and light transmission aggregometry. We utilized contrast-enhanced ultrasound molecular imaging to measure platelet GPIbα and endothelial VCAM-1 expression in atherosclerosis-prone carotid arteries of obese nonhuman primates. We observed that the TFK inhibitor, ibrutinib, inhibited platelet deposition and endothelial cell activation <i>in vivo</i>.</p><p><strong>Conclusion: </strong>Herein we found that VEGF-A signals through BMX to induce VCAM-1 expression in endothelial cells, and that VCAM-1 expression is sensitive to ibrutinib <i>in vitro</i> and in atherosclerosis-prone carotid arteries <i>in vivo</i>. These findings suggest that TFKs may contribute to the pathogenesis of atherosclerosis and could represent a novel therapeutic target.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9124262/pdf/12195_2022_Article_723.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9418435","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
OTUB2 Promotes Proliferation and Migration of Hepatocellular Carcinoma Cells by PJA1 Deubiquitylation. OTUB2通过PJA1去泛素化促进肝癌细胞增殖和迁移。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-06-01 DOI: 10.1007/s12195-022-00720-4
Gang Hu, Jianwu Yang, Hongwen Zhang, Zhen Huang, Heming Yang
{"title":"OTUB2 Promotes Proliferation and Migration of Hepatocellular Carcinoma Cells by PJA1 Deubiquitylation.","authors":"Gang Hu,&nbsp;Jianwu Yang,&nbsp;Hongwen Zhang,&nbsp;Zhen Huang,&nbsp;Heming Yang","doi":"10.1007/s12195-022-00720-4","DOIUrl":"https://doi.org/10.1007/s12195-022-00720-4","url":null,"abstract":"<p><strong>Introduction: </strong>Recent studies have revealed that several deubiquitinating enzymes (DUBs) play important roles in hepatocellular carcinoma (HCC) progression, but the roles of Otubain 2 (OTUB2) in HCC remain obscure.</p><p><strong>Methods: </strong>In this study, we investigated the expression of OTUB2 in HCC based on clinical samples and a public online database (ENCORI), and its roles and working mechanisms were further explored by <i>in vitro</i> experiments.</p><p><strong>Results: </strong>It was found that the expression of OTUB2 was significantly up-regulated in HCC tissues, and correlated with poor prognosis of HCC patients. Functionally, the overexpression of OTUB2 could promote malignant proliferation and metastasis of HCC cells, while knockdown of OTUB2 exerted the opposite results. Using two bioinformatics tools, PJA1 was identified as a potential gene regulated by OTUB2. Mechanistically, it was found that OTUB2 promoted the stabilization of PJA1 by deubiquitylation, based on immunoprecipitation (IP) and cycloheximide (CHX) assays. Moreover, the suppressive effects of OTUB2 depletion on the malignant phenotypes of HCC cells could be reversed by overexpressing PJA1.</p><p><strong>Conclusion: </strong>In conclusion, our study indicated that OTUB2 could promote the malignant proliferation and migration of HCC cells by increasing the stability of PJA1 <i>via</i> deubiquitylation.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9124278/pdf/12195_2022_Article_720.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10603455","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Amelotin Promotes Mineralization and Adhesion in Collagen-Based Systems. Amelotin促进胶原基系统的矿化和粘连。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-06-01 DOI: 10.1007/s12195-022-00722-2
Yuichi Ikeda, James Holcroft, Eri Ikeda, Bernhard Ganss
{"title":"Amelotin Promotes Mineralization and Adhesion in Collagen-Based Systems.","authors":"Yuichi Ikeda,&nbsp;James Holcroft,&nbsp;Eri Ikeda,&nbsp;Bernhard Ganss","doi":"10.1007/s12195-022-00722-2","DOIUrl":"https://doi.org/10.1007/s12195-022-00722-2","url":null,"abstract":"<p><strong>Introduction: </strong>Periodontitis is characterized by the destruction of tooth-supporting tissues including the alveolar bone. Barrier membranes are used in dentistry for tissue regenerative therapy. Nevertheless, conventional membranes have issues related to membrane stability and direct induction of bone mineralization. Amelotin (AMTN), an enamel matrix protein, regulates hydroxyapatite crystal nucleation and growth. To apply an AMTN membrane in clinical practice, we investigated the mineralizing and adhesive effects of recombinant human (rh) AMTN <i>in vitro</i> using a collagen-based system.</p><p><strong>Methods: </strong>Collagen hydrogel incorporated with rhAMTN (AMTN gel) and rhAMTN-coated dentin slices were prepared. AMTN gel was then applied on a commercial membrane (AMTN membrane). Samples were incubated for up to 24 h in mineralization buffer, and the structures were observed. The peak adhesive tensile strength between the dentin and AMTN membrane was measured. Using an enzyme-linked immunosorbent assay, the release kinetics of rhAMTN from the membrane were investigated.</p><p><strong>Results: </strong>The AMTN gel resulted in the formation of hydroxyapatite deposits both onto and within the collagen matrix. Furthermore, coating the dentin surface with rhAMTN promoted the precipitation of mineral deposits on the surface. Interestingly, site-specific mineralization was observed in the AMTN membrane. Only 1% of rhAMTN was released from the membrane. Hence, the AMTN membrane adhered to the dentin surface with more than twofold greater tensile strength than that detected for a rhAMTN-free barrier membrane.</p><p><strong>Conclusions: </strong>RhAMTN can accelerate mineralization and adhesion in collagen-based systems. Furthermore, the AMTN membrane could inform the optimal design of calcified tissue regenerative materials.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s12195-022-00722-2.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9124263/pdf/12195_2022_Article_722.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9531472","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
Effects of FTY720 on Neural Cell Behavior in Two and Three-Dimensional Culture and in Compression Spinal Cord Injury. FTY720 对二维和三维培养及压迫性脊髓损伤中神经细胞行为的影响
IF 2.3 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-04-08 eCollection Date: 2022-08-01 DOI: 10.1007/s12195-022-00724-0
Zahra Zeraatpisheh, Fatemeh Shamsi, Parisa Sarkoohi, Somayyeh Torabi, Hamed Alipour, Hadi Aligholi
{"title":"Effects of FTY720 on Neural Cell Behavior in Two and Three-Dimensional Culture and in Compression Spinal Cord Injury.","authors":"Zahra Zeraatpisheh, Fatemeh Shamsi, Parisa Sarkoohi, Somayyeh Torabi, Hamed Alipour, Hadi Aligholi","doi":"10.1007/s12195-022-00724-0","DOIUrl":"10.1007/s12195-022-00724-0","url":null,"abstract":"<p><strong>Introduction: </strong>The present study aimed to evaluate the effects of FTY720 as a neuromodulatory drug on the behaviors of neural stem/progenitor cells (NS/PCs) in two-dimensional (2-D) and three-dimensional (3-D) cultures and in spinal cord injury (SCI).</p><p><strong>Methods: </strong>The NS/PCs isolated from the ganglionic eminence of the 13.5-day old embryos were cultured as free-floating spheres. The single cells obtained from the second passage were cultured in 96-well plates without any scaffold (2-D) or containing PuraMatrix (PM, 3-D) or were used for transplantation in a mouse model of compression SCI. After exposure to 0, 10, 50, and 100 nanomolar of FTY720, the survival, proliferation, and migration of the NS/PCs were evaluated <i>in vitro</i> using MTT assay, neurosphere assay, and migration assay, respectively. Moreover, the functional recovery, survival and migration capacity of transplanted cells exposure to 100 nanomolar FTY720 were investigated in SCI.</p><p><strong>Results: </strong>Cell survival and migration capacity increased after exposure to 50 and 100 nanomolar FTY720. In addition, higher doses of FTY720 led to the formation of more extensive and more neurospheres. Although this phenomenon was similar in both 2-D and 3-D cultures, PM induced better distribution of the cells in a 3-D environment. Furthermore, co-administration of FTY720 and NS/PCs 7 days after SCI enhanced functional recovery and both survival and migration of transplanted cells in the lesion site.</p><p><strong>Conclusions: </strong>Due to the positive effects of FTY720 on the behavior of NS/PCs, using them in combination therapies can be an appealing approach for stem cell therapy in CNS injury.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.3,"publicationDate":"2022-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9474962/pdf/12195_2022_Article_724.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9614784","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of a Novel Technique for the Measurement of Neuromuscular Junction Functionality in Isotonic Conditions 一种在等张条件下测量神经肌肉连接功能的新技术的发展
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-04-07 DOI: 10.1007/s12195-022-00721-3
Flavia Forconi, L. Apa, S. Pisu, I. Casola, A. Musarò, E. Rizzuto, Z. Del Prete
{"title":"Development of a Novel Technique for the Measurement of Neuromuscular Junction Functionality in Isotonic Conditions","authors":"Flavia Forconi, L. Apa, S. Pisu, I. Casola, A. Musarò, E. Rizzuto, Z. Del Prete","doi":"10.1007/s12195-022-00721-3","DOIUrl":"https://doi.org/10.1007/s12195-022-00721-3","url":null,"abstract":"","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-04-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45330910","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Analysis of Regional Variations of the Interstitial Cells of Cajal in the Murine Distal Stomach Informed by Confocal Imaging and Machine Learning Methods. 利用共聚焦成像和机器学习方法分析小鼠胃远端Cajal间质细胞的区域变化。
IF 2.8 4区 医学
Cellular and molecular bioengineering Pub Date : 2022-04-01 DOI: 10.1007/s12195-021-00716-6
Sue Ann Mah, Peng Du, Recep Avci, Jean-Marie Vanderwinden, Leo K Cheng
{"title":"Analysis of Regional Variations of the Interstitial Cells of Cajal in the Murine Distal Stomach Informed by Confocal Imaging and Machine Learning Methods.","authors":"Sue Ann Mah,&nbsp;Peng Du,&nbsp;Recep Avci,&nbsp;Jean-Marie Vanderwinden,&nbsp;Leo K Cheng","doi":"10.1007/s12195-021-00716-6","DOIUrl":"https://doi.org/10.1007/s12195-021-00716-6","url":null,"abstract":"<p><strong>Introduction: </strong>The network of Interstitial Cells of Cajal (ICC) plays a plethora of key roles in maintaining, coordinating, and regulating the contractions of the gastrointestinal (GI) smooth muscles. Several GI functional motility disorders have been associated with ICC degradation. This study extended a previously reported 2D morphological analysis and applied it to 3D spatial quantification of three different types of ICC networks in the distal stomach guided by confocal imaging and machine learning methods. The characterization of the complex changes in spatial structure of the ICC network architecture contributes to our understanding of the roles that different types of ICC may play in post-prandial physiology, pathogenesis, and/or amelioration of GI dsymotility- bridging structure and function.</p><p><strong>Methods: </strong>A validated classification method using Trainable Weka Segmentation was applied to segment the ICC from a confocal dataset of the gastric antrum of a transgenic mouse, followed by structural analysis of the segmented images.</p><p><strong>Results: </strong>The machine learning model performance was compared to manually segmented subfields, achieving an area under the receiver-operating characteristic (AUROC) of 0.973 and 0.995 for myenteric ICC (ICC-MP; <i>n </i>= 6) and intramuscular ICC (ICC-IM; <i>n </i>= 17). The myenteric layer in the distal antrum increased in thickness (from 14.5 to 34 <i>μ</i>m) towards the lesser curvature, whereas the thickness decreased towards the lesser curvature in the proximal antrum (17.7 to 9 <i>μ</i>m). There was an increase in ICC-MP volume from proximal to distal antrum (406,960 ± 140,040 vs. 559,990 ± 281,000 <i>μ</i>m<sup>3</sup>; <i>p </i>= 0.000145). The % of ICC volume was similar for ICC-LM and for ICC-CM between proximal (3.6 ± 2.3% vs. 3.1 ± 1.2%; <i>p </i>= 0.185) and distal antrum (3.2 ± 3.9% vs. 2.5 ± 2.8%; <i>p</i> = 0.309). The average % volume of ICC-MP was significantly higher than ICC-IM at all points throughout sample (<i>p </i>< 0.0001).</p><p><strong>Conclusions: </strong>The segmentation and analysis methods provide a high-throughput framework of investigating the structural changes in extended ICC networks and their associated physiological functions in animal models.</p>","PeriodicalId":9687,"journal":{"name":"Cellular and molecular bioengineering","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8938532/pdf/12195_2021_Article_716.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10463255","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 5
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
相关产品
×
本文献相关产品
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信