BMC ecology and evolution最新文献

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The ability to withstand short-term heat shocks and long-term elevated ambient temperatures suggests different sensitivity to future climatic changes for two sympatric Mediterranean land snail species, Theba pisana and Xeropicta derbentina (Helicoidea). 抵御短期高温冲击和长期环境温度升高的能力表明,地中海两种同域陆地蜗牛——底螺(Theba pisana)和derbentina (helico总科)——对未来气候变化的敏感性不同。
IF 2.7
BMC ecology and evolution Pub Date : 2026-05-08 DOI: 10.1186/s12862-026-02527-7
Heinz-R Köhler, Yvan Capowiez, Line Capowiez, Rita Triebskorn
{"title":"The ability to withstand short-term heat shocks and long-term elevated ambient temperatures suggests different sensitivity to future climatic changes for two sympatric Mediterranean land snail species, Theba pisana and Xeropicta derbentina (Helicoidea).","authors":"Heinz-R Köhler, Yvan Capowiez, Line Capowiez, Rita Triebskorn","doi":"10.1186/s12862-026-02527-7","DOIUrl":"10.1186/s12862-026-02527-7","url":null,"abstract":"<p><p>In the 1940s, Xeropicta derbentina was introduced to the Provence region in south-eastern France. Since then, it has coexisted sympatrically with the native species Theba pisana. X. derbentina's successful establishment in Provence is commonly attributed to the hot and dry climate there. In the context of continually rising temperatures and increasing aridity resulting from global change, we conducted open-top chamber (OTC) experiments with both species to simulate extreme heat conditions to be expected in the context of climate change. After exposure in the OTCs, the temperatures on the shell surface did not differ between the two species. Nevertheless, differences in the survival of the species following heat shocks, which were induced by transferring the snails to the hot soil, were striking. An initial heat shock at the start of the OTC exposure was survived significantly better by T. pisana than by X. derbentina. However, the prevailing conditions in the OTC apparently weakened T. pisana to such an extent that only few individuals survived another heat shock a week later. In contrast, X. derbentina exhibited heat hardening induced by the OTC conditions, meaning that a heat shock after a week of adaptation to the OTCs resulted in much lower mortality than in individuals of the same species that had not adapted to OTC conditions before the heat shock. After a week of exposure to OTCs, the survival rate following heat shock was also significantly higher in X. derbentina than in T. pisana. These results suggest that X. derbentina will have a selective advantage over T. pisana as their environment continues to warm up unless more heat-tolerant phenotypes of the latter species evolve or immigrate.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13157665/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147857993","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Honu Count: how shell-etchings, participatory science, and a novel online survey are improving assessments of the Hawaiian Green sea turtle (Chelonia mydas) population. 霍努计数:贝壳蚀刻、参与式科学和一项新颖的在线调查如何改善对夏威夷绿海龟(Chelonia mydas)种群的评估。
IF 2.7
BMC ecology and evolution Pub Date : 2026-05-02 DOI: 10.1186/s12862-026-02523-x
Brittany L Clemans, Marylou K Staman, Irene K Kelly, Devin S Johnson, Summer L Martin, Camryn D Allen
{"title":"Honu Count: how shell-etchings, participatory science, and a novel online survey are improving assessments of the Hawaiian Green sea turtle (Chelonia mydas) population.","authors":"Brittany L Clemans, Marylou K Staman, Irene K Kelly, Devin S Johnson, Summer L Martin, Camryn D Allen","doi":"10.1186/s12862-026-02523-x","DOIUrl":"10.1186/s12862-026-02523-x","url":null,"abstract":"<p><p>The Hawaiian green sea turtle (Chelonia mydas; honu) subpopulation is listed as a Distinct Population Segment in the Central North Pacific Ocean under the U.S. Endangered Species Act, which mandates monitoring to understand population viability of threatened species. The honu population abundance has largely been determined by a census of nesting females at the main nesting site, Lalo (French Frigate Shoals), an atoll located approximately 1,000 km northwest of the main Hawaiian Islands (MHI) within the Papah[Formula: see text]naumoku[Formula: see text]kea Marine National Monument. Researchers and later the National Marine Fisheries Service within NOAA (NOAA Fisheries) have monitored honu at Lalo since 1973. One monitoring method used includes etching an alpha-numeric identifier temporarily (6-12 months) onto the shell with a rotary tool and sealing it with non-toxic white paint. In 2017, NOAA Fisheries launched the Honu Count Participatory Science Project, facilitating public reporting on sightings of honu with shell etchings around the MHI. Honu Count evolved in the way it collected sightings data from the public, from employing a hotline (2017-2018), to an email address (2018-2022), and most recently, an online survey via ArcGIS Survey123 (2023-present). Within the first year of the new online survey, data collection from the public increased from an average of 435 sightings per year to a total of 1,227. The project's new format has increased the breadth of invaluable honu population data, including a greater understanding of sea turtle behavior, survivorship, habitat use and migration routes, all while improving NOAA Fisheries' engagement with the public.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13185179/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147824657","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diel and tidal rhythms drive fish acoustic communities in a European kelp forest. 在欧洲的海带森林中,昼夜节律和潮汐节律驱动着鱼类的声学群落。
IF 2.7
BMC ecology and evolution Pub Date : 2026-05-02 DOI: 10.1186/s12862-026-02521-z
Marine Ethève, Pierre Thiriet, Gaëlle Legras, Philippe Lenfant, François Bourrin, Lucia Di Iorio
{"title":"Diel and tidal rhythms drive fish acoustic communities in a European kelp forest.","authors":"Marine Ethève, Pierre Thiriet, Gaëlle Legras, Philippe Lenfant, François Bourrin, Lucia Di Iorio","doi":"10.1186/s12862-026-02521-z","DOIUrl":"10.1186/s12862-026-02521-z","url":null,"abstract":"<p><p>Changes in marine animal communities shape ecological processes and ecosystem functioning. Monitoring temporal community dynamics is increasingly important under global change, yet remains challenging because community fluctuations can arise from multiple natural processes and are difficult to assess. Passive acoustic monitoring of signals produced by marine fauna offers a non-invasive means of tracking community dynamics, providing continuous, high-resolution data that capture temporal patterns often missed by traditional methods. Despite their potential as proxies for macrofaunal assemblages and associated dynamics, the responses of acoustic communities to environmental variability in marine ecosystems remain largely unexplored. This study aimed to characterize fish acoustic communities in a tidal European kelp forest and identify the environmental drivers shaping their temporal variability. Continuous acoustic recordings were combined with environmental measurements and underwater visual surveys to address these objectives. Generalized linear models revealed that diel and tidal cycles were the dominant drivers of acoustic activity, diversity, and community composition during the summer study period. Other environmental variables had weaker effects, reflecting the fauna's adaptation to marked short-term fluctuations in this dynamic ecosystem. Acoustic activity and richness increased at low water height, contrasting with higher visually observed fish abundance at high water height. This discrepancy suggests that sound production reflects behavioural interactions rather than fish abundance alone. The greater number of sound types (26) relative to observed species (19) indicates either behavioural sound diversity within species or the presence of undocumented soniferous taxa. Calmer sea conditions also promoted higher vocal activity and acoustic richness. This study provides an unprecedented description of kelp forest acoustic communities in Europe, demonstrating the value of ecoacoustics to complement visual surveys for capturing natural variability and establishing essential baseline information for detecting long-term ecological shifts in these climate-sensitive habitats.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13179613/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147824669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Open access and digital morphology data in evolutionary biology: expanding frontiers of knowledge. 开放获取和数字形态学数据在进化生物学:扩大知识的前沿。
IF 2.7
BMC ecology and evolution Pub Date : 2026-04-28 DOI: 10.1186/s12862-026-02522-y
Naomi De Leo, Margot Michaud, Luigi Maiorano, Carlo Meloro, Narimane Chatar, Davide Tamagnini
{"title":"Open access and digital morphology data in evolutionary biology: expanding frontiers of knowledge.","authors":"Naomi De Leo, Margot Michaud, Luigi Maiorano, Carlo Meloro, Narimane Chatar, Davide Tamagnini","doi":"10.1186/s12862-026-02522-y","DOIUrl":"10.1186/s12862-026-02522-y","url":null,"abstract":"<p><p>The recent integration of 3D imaging and digital methodologies has revolutionized evolutionary biology, offering unprecedented opportunities for analysing and sharing morphological data. However, the transition toward open access remains incomplete due to persistent technical, legal, and institutional barriers. Issues such as lack of standardization, massive file sizes, and unclear intellectual property rights continue to hinder data verification and reproducibility. These challenges have acquired new urgency with the rapid rise of machine learning and AI-based tools for automated segmentation, landmarking, and shape analysis, which require large, standardized, and openly accessible training datasets - making inaccessible 3D data not merely an inconvenience, but a source of systematic bias in the algorithms shaping the field's future. This review synthesizes technical, legal, and behavioural perspectives on open data in digital morphology, building on prior work to address the specific challenges of the current AI era. By advocating for the adoption of FAIR principles, the use of persistent digital identifiers, and the implementation of digital watermarking, we offer recommendations for establishing minimum standards in data publication. Ultimately, a shift toward responsible data stewardship is essential to ensuring that digital morphological resources remain accessible, reproducible, and scientifically valuable for both human and computational users.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-04-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13157668/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147792058","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The ecological importance of natural dark nights for circadian organization, metabolism and reproduction in birds. 自然黑夜对鸟类昼夜节律组织、新陈代谢和繁殖的生态重要性。
IF 2.7
BMC ecology and evolution Pub Date : 2026-04-25 DOI: 10.1186/s12862-026-02526-8
Amaan Buniyaadi, Vatsala Tripathi, Ritu Rai, Vinod Kumar
{"title":"The ecological importance of natural dark nights for circadian organization, metabolism and reproduction in birds.","authors":"Amaan Buniyaadi, Vatsala Tripathi, Ritu Rai, Vinod Kumar","doi":"10.1186/s12862-026-02526-8","DOIUrl":"10.1186/s12862-026-02526-8","url":null,"abstract":"<p><p>The ability to assess and utilise the length of the daily light period has been identified as a key component of the physiological ecology regulating metabolism and reproduction across various vertebrate taxa. While light-dependent responses have been extensively studied, the ecological and physiological significance of natural darkness remains relatively less explicitly emphasized. In fact, studies investigating the role of light in controlling biological processes underscore that the period of darkness is an integral component of the light-dark cycle and an important ecological dimension in shaping the biology of organisms. Therefore, drawing largely from artificial light at night (ALAN) studies, this review synthesizes current evidence on how disruption of light-dark cycles, particularly the darkness at night, perturbs the circadian organization, with cascading effects on metabolism and reproduction, and how metabolism acts as a physiological gatekeeper of reproduction in diurnal vertebrates. Here, much of the evidence that we discuss is from both laboratory and field studies on diurnal birds. Importantly, we underscore the critical ecological value of the natural darkness within the 24-h day, emphasizing that the preservation of the night environment is crucial for maintaining the bioenergetic balance and population viability of species in an overly lit, urbanized environment.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"26 1","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-04-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13123027/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147792185","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mitochondrial genome evolution across marine-freshwater divergence in the flatfish genus Brachirus. 比目鱼属中海洋-淡水分化的线粒体基因组进化。
IF 2.7
BMC ecology and evolution Pub Date : 2026-04-24 DOI: 10.1186/s12862-026-02525-9
Hyeongwoo Choi, Chungkug Park, Yun Keun An
{"title":"Mitochondrial genome evolution across marine-freshwater divergence in the flatfish genus Brachirus.","authors":"Hyeongwoo Choi, Chungkug Park, Yun Keun An","doi":"10.1186/s12862-026-02525-9","DOIUrl":"10.1186/s12862-026-02525-9","url":null,"abstract":"<p><p>Freshwater adaptation from marine ancestors represents a major ecological transition in teleost evolution, yet its genomic basis remains poorly understood. The genus Brachirus is predominantly marine, although a small subset of species has secondarily adapted to freshwater habitats, providing a rare framework for studying ecological transitions. We sequenced and assembled complete mitochondrial genomes of two freshwater species, B. panoides and B. villosus, generating circular genomes of 16,629 bp and 16,609 bp encoding 13 protein-coding genes, 22 transfer RNAs, and two ribosomal RNAs. Phylogenetic analyses using maximum likelihood (ML) and Bayesian inference (BI) placed Brachirus within Soleidae and dated their divergence to 19–24.3 million years ago (MYA). Selection test detected no widespread adaptive signals in mitochondrial genes associated with freshwater lineages; only two genes showed episodic selection under branch models. These findings suggest that mitochondrial genomes alone may provide limited insight into freshwater adaptation and highlight the need for nuclear genomic data to fully resolve the evolutionary mechanisms underlying habitat transitions in Brachirus.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-04-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13134316/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147792061","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Inter- and intraspecific morphometric divergences in a Seychelles endemic gecko genus. 塞舌尔特有壁虎属的种间和种内形态差异。
IF 2.7
BMC ecology and evolution Pub Date : 2026-04-21 DOI: 10.1186/s12862-026-02517-9
Markus A Roesch, Nancy Bunbury, D James Harris, Sara Rocha, Christopher N Kaiser-Bunbury, David J Gower, Greg Berke, Christina Marques, Gérard Rocamora, Anna Zora, Karolin Engelkes
{"title":"Inter- and intraspecific morphometric divergences in a Seychelles endemic gecko genus.","authors":"Markus A Roesch, Nancy Bunbury, D James Harris, Sara Rocha, Christopher N Kaiser-Bunbury, David J Gower, Greg Berke, Christina Marques, Gérard Rocamora, Anna Zora, Karolin Engelkes","doi":"10.1186/s12862-026-02517-9","DOIUrl":"10.1186/s12862-026-02517-9","url":null,"abstract":"<p><p>Accurate species delimitation is essential for understanding biodiversity patterns and guiding conservation, yet cryptic species with minimal morphological variation often obscure the assessment of true species diversity, making the identification of reliable diagnostic characters critical. Island radiations exemplify this challenge by concentrating endemic diversity in restricted areas, which accentuates both the urgency of conservation and the need for accurate taxonomy, while often presenting species divergences masked by subtle morphological differences. Here, we investigated patterns of morphological differentiation in Ailuronyx geckos, a genus endemic to the Seychelles archipelago, comprising deeply divergent lineages and unresolved, possibly cryptic species boundaries. We applied 3D and 2D morphometric analyses across the range (16 islands) of the three recognised species: the bronze-eyed gecko A. seychellensis, dwarf bronze gecko A. tachyscopaeus, and giant bronze gecko A. trachygaster. 3D geometric morphometric analyses of cranial and mandibular landmark data from 42 geckos revealed strong species-level differences. Ailuronyx trachygaster exhibits extreme skull sculpturing with rugose textures on up to ten cranial and three mandibular bones, while the other two species have smooth skull surfaces. Skull elongation and narrowing increased with decreasing body size from the larger A. trachygaster, via the medium-sized A. seychellensis, to the smaller A. tachyscopaeus. Analysis of body size-corrected 2D measurements of ten external morphological traits from 567 geckos revealed similar differences in head dimensions among the species, but also showed changes in mass and toe length. While we observed substantial morphological variation between islands, we did not find support for the previously identified northern and southern island group divergence within either A. seychellensis or A. tachyscopaeus. Nevertheless, we found strong support for the proposed divergence between northern and southern Mahé populations of A. tachyscopaeus, with variation in mass and head size between the two populations. We provide morphometric parameters to guide species identification within this gecko genus and highlight distinct population units that warrant further genomic investigation and prioritisation for conservation. Our findings illustrate the complexity of morphological diversification in archipelagos, where island-specific processes may outweigh regional biogeographic patterns. This underscores the need for integrative approaches to species delimitation and conservation in insular systems.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"26 1","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13097663/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147792132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Potential distribution of Amomum Roxb. species in China under climate change: a GIS-based ecological niche modeling approach. 砂砂属植物的潜在分布。气候变化背景下中国物种生态位建模方法
IF 2.7
BMC ecology and evolution Pub Date : 2026-04-21 DOI: 10.1186/s12862-026-02518-8
Tianchan Yun, Yue Xiao, Yanmei Gong, Yanxian Lai, Shiya Huang, Lanyue Zhang, Kai Zhao, Qingqing Liu, Cong Deng
{"title":"Potential distribution of Amomum Roxb. species in China under climate change: a GIS-based ecological niche modeling approach.","authors":"Tianchan Yun, Yue Xiao, Yanmei Gong, Yanxian Lai, Shiya Huang, Lanyue Zhang, Kai Zhao, Qingqing Liu, Cong Deng","doi":"10.1186/s12862-026-02518-8","DOIUrl":"10.1186/s12862-026-02518-8","url":null,"abstract":"","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"26 1","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13107748/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147792093","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative mitogenomics of freshwater snails of the genus Biomphalaria (Gastropoda: Planorbidae) and new insights into mitochondrial genome evolution in Hygrophila. 淡水蜗牛属(腹足纲:Planorbidae)的比较有丝分裂基因组学和嗜湿蜗牛线粒体基因组进化的新见解。
IF 2.7
BMC ecology and evolution Pub Date : 2026-04-17 DOI: 10.1186/s12862-026-02520-0
Leila B Guzmán, Ariel A Beltramino, Alejandra Rumi, Roberto E Vogler
{"title":"Comparative mitogenomics of freshwater snails of the genus Biomphalaria (Gastropoda: Planorbidae) and new insights into mitochondrial genome evolution in Hygrophila.","authors":"Leila B Guzmán, Ariel A Beltramino, Alejandra Rumi, Roberto E Vogler","doi":"10.1186/s12862-026-02520-0","DOIUrl":"10.1186/s12862-026-02520-0","url":null,"abstract":"<p><p>BACKGROUND: Freshwater snails of the genus Biomphalaria include several species of major public health importance as intermediate hosts of schistosomiasis and represent a key group for evolutionary and taxonomic research within Hygrophila. However, complete mitochondrial genomes are available for only a limited number of Biomphalaria species, restricting comparative assessments of mitogenome evolution and the ability of mitogenomic data to resolve contentious relationships within Planorbidae and across Hygrophila. Here, we generate and analyse six complete mitochondrial genomes from four Neotropical Biomphalaria species collected in Argentina, including the first mitogenomes for B. peregrina and B. orbignyi, and evaluate genomic architecture, molecular evolutionary patterns, and phylogenetic relationships using multiple mitogenome-based approaches. RESULTS: All six mitogenomes contained the standard complement of 37 mitochondrial genes and exhibited a fully conserved gene order and strand orientation across Biomphalaria. Genomes were highly compact, with numerous gene overlaps. An unusually long non-coding region (210–242 bp) was detected exclusively in B. peregrina, contributing to its slightly larger mitogenome size. Intraspecific variation in the secondary structure of tRNACys, including arm truncation, was also observed within B. peregrina. All genomes showed negative AT-skew and positive GC-skew, indicating conserved strand asymmetry across Hygrophila. Protein-coding genes displayed strong codon-usage bias and were predominantly shaped by purifying selection, with atp8 identified as the most variable and least constrained gene. Phylogenetic analyses recovered two closely related topologies across datasets, supported monophyly of Bulinidae and Lymnaeidae, and consistently placed bulinids within planorbids, rendering Planorbidae non-monophyletic. Amphipepleinae was monophyletic, whereas Lymnaeinae was paraphyletic in a pattern sensitive to taxon sampling. Within Biomphalaria, B. peregrina was consistently resolved as the earliest-diverging lineage among sampled species. CONCLUSIONS: These six newly generated mitogenomes substantially expand genomic resources for Neotropical Biomphalaria and reveal strong conservation of mitochondrial genome organisation alongside pronounced heterogeneity in gene-specific evolutionary dynamics. Complete mitochondrial genomes enhance phylogenetic resolution within Hygrophila and provide independent evidence relevant to ongoing debates in planorbid systematics, including the affinity between Bulininae and Planorbinae. Nevertheless, broader taxon sampling and the integration of nuclear genomic data will be essential to fully resolve subfamilial relationships and species boundaries within this medically important group.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13107851/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147719155","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Modeling the distribution of soil organic carbon in two hyper-arid inland lakes of the Wadi El-Rayan Protected Area, Egypt. 埃及Wadi El-Rayan保护区两个极度干旱内陆湖土壤有机碳分布模拟
IF 2.7
BMC ecology and evolution Pub Date : 2026-04-17 DOI: 10.1186/s12862-026-02519-7
Ebrahem M Eid, Mona E M Mabrouk, Mohamed R A A Soliman, Shaimaa G Salama, Kholod A Khattab
{"title":"Modeling the distribution of soil organic carbon in two hyper-arid inland lakes of the Wadi El-Rayan Protected Area, Egypt.","authors":"Ebrahem M Eid, Mona E M Mabrouk, Mohamed R A A Soliman, Shaimaa G Salama, Kholod A Khattab","doi":"10.1186/s12862-026-02519-7","DOIUrl":"10.1186/s12862-026-02519-7","url":null,"abstract":"<p><p>BACKGROUND: This study examines the patterns and storage of soil organic carbon (SOC) in the Upper and Lower Lakes of Egypt’s Wadi El-Rayan Protected Area, a hyper-arid inland lake system. The objective was to develop predictive models for estimating volumetric SOC density (SOCv, kg C/m³) and cumulative SOC stocks (SOCc, kg C/m²) at varying soil depths across both lakes. Using data from 40 soil cores comprising 400 individual samples, three mathematical models (allometric, exponential, and sigmoid) were applied to analyze SOC. RESULTS: Significant differences in soil bulk density (SBD), SOC content, SOCv, and SOCc were observed between the two lakes (p < 0.05–0.001). The Lower Lake exhibited the highest mean SBD (1.01 ± 0.03 g/cm³) compared with the Upper Lake (0.83 ± 0.03 g/cm³), whereas the Upper Lake showed the highest mean SOC content (29.4 ± 2.0 g C/kg), SOCv (20.3 ± 1.5 kg C/m³), and SOCc (10.2 ± 2.0 kg C/m²), with the corresponding lowest values recorded in the Lower Lake (7.0 ± 0.6 g C/kg, 6.4 ± 0.6 kg C/m³, and 3.2 ± 0.5 kg C/m², respectively). A negative correlation between SOC content and SBD was observed in both lakes (r = − 0.344 in the Upper Lake and r = − 0.188 in the Lower Lake). For SOCv predictions in the Lower Lake, the allometric and exponential models provided the best fit, with R² values of 0.989 and 0.980, respectively. In contrast, the exponential, allometric, and sigmoid models performed well for the Upper Lake, with R² values of 0.972, 0.963, and 0.958, respectively. All three modeling approaches achieved high accuracy (R² > 0.99) in simulating SOCc. The allometric and exponential models provided the best fit for the Lower Lake (R² = 0.999), while the exponential and sigmoid models yielded the best fit for the Upper Lake (R² = 0.999). CONCLUSIONS: These findings enhance our understanding of SOC distribution in the hyper-arid inland lakes of the Wadi El-Rayan Protected Area and provide a foundation for more accurate predictions of future carbon stocks, thereby supporting conservation, restoration, and preservation efforts.</p>","PeriodicalId":93910,"journal":{"name":"BMC ecology and evolution","volume":"26 1","pages":""},"PeriodicalIF":2.7,"publicationDate":"2026-04-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13088408/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147719172","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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