Biochimie最新文献

筛选
英文 中文
The extreme C-terminal region of the phage BFK20 gp41 helicase has a role in DNA binding, protein-ATP interactions and ATPase activity. 噬菌体BFK20 gp41解旋酶的末端c端区域在DNA结合、蛋白- atp相互作用和atp酶活性中起作用。
Biochimie Pub Date : 2025-07-22 DOI: 10.1016/j.biochi.2025.07.022
Nora Halgasova, Lucia Bocanova, Jacob A Bauer, Barbora Niku, Kristina Papayova, Gabriela Bukovska
{"title":"The extreme C-terminal region of the phage BFK20 gp41 helicase has a role in DNA binding, protein-ATP interactions and ATPase activity.","authors":"Nora Halgasova, Lucia Bocanova, Jacob A Bauer, Barbora Niku, Kristina Papayova, Gabriela Bukovska","doi":"10.1016/j.biochi.2025.07.022","DOIUrl":"https://doi.org/10.1016/j.biochi.2025.07.022","url":null,"abstract":"<p><p>Replication protein gp41 from bacteriophage BFK20 is a 537 residue SF2 family helicase. The N-terminal two-thirds of the gp41 sequence is homologous to XPB/Ssl2-like helicases, but no clear homology to any known and characterized protein could be found for the C-terminal one-third. We prepared and studied the following gp41 mutant recombinant proteins: deletion mutant gp41L481, missing the last 56 C-terminal amino acids (482-537), and five point mutants, each substituting a single amino acid from this region with alanine (K516A, R518A, D520A, D521A and E522A). We tested the ATPase activities, DNA binding abilities, thermal stabilities and protein-ATP interactions of each isolated protein and compared them with wild-type-like protein gp41HN. The ATPase activity and DNA binding ability of gp41L481 were significantly lower than gp41HN. The K516A and R518A mutations resulted in an almost total loss of ATPase activity, while the D521A mutation produced a lesser loss. The K516A mutation also significantly reduced the DNA binding ability of the mutant protein. All point mutants were less stable than the wild-type protein to a greater or lesser extent, and ATP had a significant stabilizing effect on most tested proteins. We conclude that the amino-acids at the extreme C-terminus of gp41 are important for its ATPase activity, DNA binding ability and protein-ATP interactions. BFK20 gp41 is an example of a phage helicase whose accessory domain significantly affects its properties and it provides additional evidence for the importance of accessory domains for helicase function.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144710282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ribosome biogenesis is a therapeutic vulnerability in pediatric neuroblastoma. 核糖体生物发生是小儿神经母细胞瘤的治疗弱点。
Biochimie Pub Date : 2025-07-21 DOI: 10.1016/j.biochi.2025.07.018
Camille Jouines, Piero Lo Monaco, Angéline Gaucherot, Marie-Ambre Monet, Isabelle Iacono Di Cacito, Valentin Simioni, Déborah Monchiet, Jean-Jacques Diaz, Valérie Combaret, Virginie Marcel, Frédéric Catez
{"title":"Ribosome biogenesis is a therapeutic vulnerability in pediatric neuroblastoma.","authors":"Camille Jouines, Piero Lo Monaco, Angéline Gaucherot, Marie-Ambre Monet, Isabelle Iacono Di Cacito, Valentin Simioni, Déborah Monchiet, Jean-Jacques Diaz, Valérie Combaret, Virginie Marcel, Frédéric Catez","doi":"10.1016/j.biochi.2025.07.018","DOIUrl":"https://doi.org/10.1016/j.biochi.2025.07.018","url":null,"abstract":"<p><p>Neuroblastoma is a heterogeneous malignant pediatric tumor, the prognosis of which depends on patient age and disease stage. Current treatment strategies rely on four key diagnostic criteria: age, histological stage, genomic profile, and MYCN gene status. The oncogenic activity of MYC depends on ribosome biogenesis, which is hyperactivated in cancer cells to support their high proliferative capacity, and which may thus represent a vulnerability in neuroblastoma and constitute a therapeutic target. Here, using the well-established IMR-32 cell line along with a previously established panel of patient-derived neuroblastoma cell lines with varying MYCN status, we show that RNA polymerase I inhibition following exposure to CX-5461 and BMH-21 suppressed cell proliferation at nanomolar concentrations and induced ribosomal stress, leading to the activation of apoptosis and the p21 pathway. Furthermore, analysis of expression of ribosome biogenesis factors using publicly available datasets and RT-qPCR data from an in-house neuroblastoma cohort, we identified FBL as a marker of poor prognosis in neuroblastoma. Consistently, FBL knockdown reduced neuroblastoma cell proliferation, supporting its relevance as a therapeutic target. In conclusion, our study reinforces the therapeutic potential of ribosome biogenesis inhibition in neuroblastoma and expands the list of potential targets to include rRNA maturation factors. These findings highlight the relevance of targeting ribosome biogenesis as a novel approach for neuroblastoma treatment.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144700665","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Genetically modified NK cells equipped with a switchable CAR for the treatment of HER2-positive cancers. 配备可切换CAR的转基因NK细胞用于治疗her2阳性癌症。
Biochimie Pub Date : 2025-07-21 DOI: 10.1016/j.biochi.2025.07.021
Maria A Streltsova, Anna A Boyko, Nadezhda A Alekseeva, Galina M Proshkina, Elena I Shramova, Maria V Grechikhina, Marina A Shevchenko, Olga A Shustova, Aleksey I Popodko, Elena V Konovalova, Aleksey A Schulga, Aleksander M Sapozhnikov, Sergey M Deyev, Elena I Kovalenko
{"title":"Genetically modified NK cells equipped with a switchable CAR for the treatment of HER2-positive cancers.","authors":"Maria A Streltsova, Anna A Boyko, Nadezhda A Alekseeva, Galina M Proshkina, Elena I Shramova, Maria V Grechikhina, Marina A Shevchenko, Olga A Shustova, Aleksey I Popodko, Elena V Konovalova, Aleksey A Schulga, Aleksander M Sapozhnikov, Sergey M Deyev, Elena I Kovalenko","doi":"10.1016/j.biochi.2025.07.021","DOIUrl":"https://doi.org/10.1016/j.biochi.2025.07.021","url":null,"abstract":"<p><p>This study is focused on the development and characterization of NK-92 cells bearing a switchable chimeric antigen receptor (CAR) system for targeting HER2-positive breast cancers. The system employs a universal CAR framework based on the high-affinity interaction between barstar within the CAR (BsCAR) and barnase in the antigen-specific module. The barnase component was fused with an engineered ankyrin repeat protein (DARPin) specifically recognizing the HER2 tumor antigen. NK-92 cells were successfully modified to express BsCAR, while control mock-NK92 cells were generated with a variant of BsCAR incapable of surface expression. Flow cytometry analysis confirmed successful transduction and proper surface expression of the BsCAR construct. The cytotoxic potential of the modified cells was evaluated through multiple approaches, including degranulation activity measurements, target cell lysis assays, and three-dimensional spheroid models. In the presence of the HER2-specific targeting module (Da-9.29-Bn), BsCAR-NK92 cells demonstrated significant and specific cytotoxicity against HER2-positive tumor cells, particularly those with high HER2 expression (SKBR3, SKOV-Kat, BT-474). The specificity of the system was confirmed using MCF7 cells expressing low levels of HER2 as controls. In three-dimensional models, BsCAR-NK92 cells maintained their cytotoxic activity. These findings demonstrate the potential of BsCAR-NK92 cells as an \"off-the-shelf\" therapeutic approach for targeting HER2-positive cancers, offering a flexible platform that can be adapted to target different tumor antigens through the modular barnase-barstar system.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144700664","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Sequence characteristics, expression pattern, ovarian maintenance function and action mechanism of SIRT1 in Chlamys farreri. 栉孔栉孔栉孔栉孔中SIRT1的序列特征、表达模式、卵巢维持功能及作用机制。
Biochimie Pub Date : 2025-07-20 DOI: 10.1016/j.biochi.2025.07.020
Yan Xing, Dongyan Luo, Xijuan Lei, Xiaoling Liu
{"title":"Sequence characteristics, expression pattern, ovarian maintenance function and action mechanism of SIRT1 in Chlamys farreri.","authors":"Yan Xing, Dongyan Luo, Xijuan Lei, Xiaoling Liu","doi":"10.1016/j.biochi.2025.07.020","DOIUrl":"https://doi.org/10.1016/j.biochi.2025.07.020","url":null,"abstract":"<p><p>SIRT1 (silent mating type information regulation 2 homolog 1), a histone deacetylase in Sirtuin family, regulates ovarian development and aging in higher mammals, but its role in invertebrates remains unexplored. This study investigated SIRT1 in the scallop Chlamys farreri. Its 2382 bp CDS (coding sequence) encodes 793 amino acids with the NTERM activation motif, the catalytic activity center and the ESA domain. QRT-PCR revealed that SIRT1 expression level in gonads was significantly higher than that in other tissues. In ovary, SIRT1 expression was the highest at growing stage, in the testes, the gene was highly expressed at growing stage and mature stage, suggesting it was related to the oocyte development, spermatocyte development and the sperm maturation. Furthermore, injection experiment showed resveratrol (SIRT1 activator) up-regulated SIRT1' expression, then oocyte numbers were increased but oocytes' maturity were suppressed, while nicotinamide (SIRT1 inhibitor) down-regulated SIRT1' expression, then oocyte numbers were reduced but oocytes' maturity were accelerated, suggesting SIRT1 can promote the oocytes proliferation while delay the oocytes maturation to prevent ovarian aging. Yeast one-hybrid and electrophoretic mobility shift assay confirmed SIRT1 binds Chlamys farreri FOXL2 via two sequences (SIF1: +28-+35; SIF2: +53-+60). Dual-luciferase reporter system showed FOXL2 could up-regulate SIRT1. It was worth mentioning that FOXL2 expression was up-regulated when nicotinamide down-regulated SIRT1 expression in ovaries, indicating there was a positive and negative feedback regulation between SIRT1 and FOXL2 expression, we speculate that those two genes play a crucial role in the development and maintenance of Chlamys farreri ovarian function.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144692749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advancing Antimicrobial Peptides: Overcoming Challenges in the Era of Bacterial Resistance. 推进抗菌肽:克服细菌耐药性时代的挑战。
Biochimie Pub Date : 2025-07-19 DOI: 10.1016/j.biochi.2025.07.019
Ratchaneewan Aunpad, Thanit Thitirungreangchai
{"title":"Advancing Antimicrobial Peptides: Overcoming Challenges in the Era of Bacterial Resistance.","authors":"Ratchaneewan Aunpad, Thanit Thitirungreangchai","doi":"10.1016/j.biochi.2025.07.019","DOIUrl":"https://doi.org/10.1016/j.biochi.2025.07.019","url":null,"abstract":"<p><p>Antimicrobial resistance (AMR) in bacteria poses a significant public health threat, necessitating the development of alternative treatments. Antimicrobial peptides (AMPs) have emerged as promising candidates to address this issue due to their potent antimicrobial activity and diverse functional properties, which provide distinct advantages over conventional antibiotics. However, the clinical application of AMPs has been hindered by several challenges, including instability in vivo, safety concerns, and varying efficacy in vivo. To overcome these limitations, innovative approaches to AMP design and modification, as well as advanced delivery systems, are being actively investigated. This article provides a comprehensive overview of the classification, structural characteristics, and mechanisms of action of AMPs. Recent advances in AMP design and modification are highlighted, with a focus on strategies aimed at enhancing their therapeutic potential. Additionally, the development of delivery systems and formulation strategies for AMPs is discussed, with an emphasis on improving bioavailability, targeted distribution, and effectiveness in combating drug-resistant bacterial infections.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144683806","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Hydrophobic cluster analysis at protein and proteome scales. 蛋白质和蛋白质组尺度上的疏水聚类分析。
Biochimie Pub Date : 2025-07-10 DOI: 10.1016/j.biochi.2025.07.013
Isabelle Callebaut, Jean-Paul Mornon
{"title":"Hydrophobic cluster analysis at protein and proteome scales.","authors":"Isabelle Callebaut, Jean-Paul Mornon","doi":"10.1016/j.biochi.2025.07.013","DOIUrl":"10.1016/j.biochi.2025.07.013","url":null,"abstract":"<p><p>Hydrophobic Cluster Analysis (HCA) adds secondary structure information to the analysis of protein amino acid sequence. Focusing on the elementary building blocks of protein folds, this approach has proved to be a powerful tool for detecting distant (hidden) relationships between proteins. At a time when huge masses of data are now available, both in terms of protein sequences and models of three-dimensional structures, it still constitutes a relevant tool for analyzing structural features at the scale of whole proteomes, enabling, among other things, to characterize the continuum between disorder and order and to explore the characteristics of protein dark matter. The aim of this mini-review is to provide a brief overview of this approach, describing its principles and achievements, recent developments and future prospects.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144621463","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Insights into the evolution and regulation of hybrid internal-terminal exons from tropomyosin exon 9A in Xenopus laevis. 非洲爪蟾原肌球蛋白外显子9A内末端杂化外显子的进化与调控
Biochimie Pub Date : 2025-07-09 DOI: 10.1016/j.biochi.2025.07.009
Agnès Méreau, Hubert Lerivray, Justine Viet, Serge Hardy, Luc Paillard, Yann Audic
{"title":"Insights into the evolution and regulation of hybrid internal-terminal exons from tropomyosin exon 9A in Xenopus laevis.","authors":"Agnès Méreau, Hubert Lerivray, Justine Viet, Serge Hardy, Luc Paillard, Yann Audic","doi":"10.1016/j.biochi.2025.07.009","DOIUrl":"10.1016/j.biochi.2025.07.009","url":null,"abstract":"<p><p>Hybrid internal-terminal exons function as either internal or terminal exons. Their evolutionary origins remain unclear. Here, we investigate the phylogenetic origin and regulation of a hybrid exon, 9A9', in the TPM1 gene encoding tropomyosin alpha-1. We demonstrate that exon 9A9' was originally terminal in non-vertebrate deuterostomes and switched to internal in vertebrates through the exonization of a downstream exon, 9B. While the terminal nature of exon 9A9' was lost in most vertebrates, it was conserved in amphibians and coelacanths where it behaves as a hybrid internal-terminal exon. Using Xenopus laevis as a model, we show that the preservation of terminal exon 9A9' in the tpm1 gene likely arose from evolutionary pressures to mitigate the developmental toxicity linked to exon 9B inclusion during neurulation. We identify two peculiarities of terminal exon 9A9': it lies downstream of an AG-independent intron, and its definition is supported by an intronic cis-regulatory element, the UTE, which enhances recognition of the weak cleavage-polyadenylation site. Our findings characterize the molecular mechanisms underlying the regulation of hybrid internal-terminal exons and reveal how evolutionary pressures can reactivate vestigial traits to resolve developmental challenges. This work broadens our understanding of alternative splicing evolution and its significance in vertebrate development.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144621465","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dietary DHA limitation did not affect swimming and metabolic performance, but reduced growth in wild European sea bass. 饲料DHA限制不影响野生欧洲黑鲈的游泳和代谢性能,但会降低其生长。
Biochimie Pub Date : 2025-07-09 DOI: 10.1016/j.biochi.2025.07.005
Mickaël Péron, Philippe Soudant, Fabienne Le Grand, David Mazurais, Victor Simon, Christel Lefrançois, Marie Vagner
{"title":"Dietary DHA limitation did not affect swimming and metabolic performance, but reduced growth in wild European sea bass.","authors":"Mickaël Péron, Philippe Soudant, Fabienne Le Grand, David Mazurais, Victor Simon, Christel Lefrançois, Marie Vagner","doi":"10.1016/j.biochi.2025.07.005","DOIUrl":"10.1016/j.biochi.2025.07.005","url":null,"abstract":"<p><p>Long-chain polyunsaturated fatty acids (LC PUFA), particularly docosahexaenoic acid (DHA), are essential for cell membrane structure and function, impacting overall fish performance. These molecules, produced primarily by phytoplankton, are transferred up the trophic chain; however, climate change is predicted to modify phytoplankton communities with a cascading effect on the global DHA production and thus availability for consumers such as fish. This study aimed to evaluate the effects of dietary DHA limitation on i) the fatty acid composition in fish tissues ii) somatic growth, swimming performance, and metabolic rates, and iii) the activation of biosynthetic pathways at the molecular level, by measuring gene expression involved in DHA synthesis. We conditioned wild-caught European sea bass (Dicentrarchus labrax) juveniles for five months on a DHA-depleted or control diet. Dietary DHA limitation led to selective retention or synthesis of DHA in fish tissues (liver, brain, and muscle), a reduced growth and an up-regulation of DHA biosynthetic pathways without compensating for DHA deficiency in tissues. Fish fed the low DHA diet may have up-regulated biosynthetic pathway which may be energetically costly, as high tissue DHA correlated with reduced growth. Alternatively, the lower tissue DHA levels in these fish might cause slower growth. However, metabolic rates and swimming performance were not affected by dietary treatment. Inter-individual variability was observed across all variables, highlighting underlying trade-offs when facing DHA limitation. This work provides insight into the physiological consequences of dietary DHA reduction due to global change and the mechanisms fish employ to mitigate its effects.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144621462","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structurally diverse herbicides inhibit β-keto-acyl-CoA synthases from monocotyledonous and dicotyledonous plant species. 摘要结构多样的除草剂抑制单子叶和双子叶植物中β-酮酰基辅酶a合成酶。
Biochimie Pub Date : 2025-07-08 DOI: 10.1016/j.biochi.2025.07.007
Claire Le Ruyet, Stéphanie Pascal, Gerlinde Usunow, Pierre Van Delft, Didier Thoraval, François Doignon, Frédéric Domergue, Peter Luemmen, Jérôme Joubès
{"title":"Structurally diverse herbicides inhibit β-keto-acyl-CoA synthases from monocotyledonous and dicotyledonous plant species.","authors":"Claire Le Ruyet, Stéphanie Pascal, Gerlinde Usunow, Pierre Van Delft, Didier Thoraval, François Doignon, Frédéric Domergue, Peter Luemmen, Jérôme Joubès","doi":"10.1016/j.biochi.2025.07.007","DOIUrl":"10.1016/j.biochi.2025.07.007","url":null,"abstract":"<p><p>Very-long-chain fatty acids (VLCFA) serve as precursors for various lipids that play crucial physiological and structural roles in plants. The β-keto-acyl-CoA synthase (KCS) catalyzes the initial step of VLCFA elongation and determines the chain-length substrate specificity of the fatty acid elongase complex. Following an extensive phylogenetic analysis, 28 KCS genes from various plant species, including 17 functionally uncharacterized genes, were expressed in Saccharomyces cerevisiae, and their VLCFAs profiles were analyzed using gas chromatography-mass spectrometry. Yeast expressing active KCS were subsequently exposed in vivo to various Group 15 herbicides to investigate their mode of action and selectivity. These experiments revealed differential sensitivities of KCS enzymes to benfuresate, cafenstrole, flufenacet, pyroxasulfone, and metazachlor, while endogenous VLCFA synthesis in yeast, which relies on Elop-type elongases, remained unaffected. Furthermore, to address a significant gap in understanding the inhibitory potency of Group 15 herbicides, we developed an in vitro enzymatic assay based on the quantification of the 3-oxo-products generated during the KCS-catalyzed reaction using high-performance liquid chromatography-mass spectrometry coupled with UV detection. This novel biochemical approach enabled the evaluation of inhibitor potency as well as the kinetic characterization of both established and newly identified KCS enzyme inhibitors.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144610599","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The vinyl-α-substituted cyclopentyl oxylipins. 乙烯基-α-取代环戊基氧脂。
Biochimie Pub Date : 2025-07-08 DOI: 10.1016/j.biochi.2025.07.004
Priyanka Kataria, Alexandre Guy, Thierry Durand, Camille Oger
{"title":"The vinyl-α-substituted cyclopentyl oxylipins.","authors":"Priyanka Kataria, Alexandre Guy, Thierry Durand, Camille Oger","doi":"10.1016/j.biochi.2025.07.004","DOIUrl":"10.1016/j.biochi.2025.07.004","url":null,"abstract":"<p><p>Hybridalactone, agardhilactone, ecklonialactones, eiseniachlorides, and egregiachlorides, isolated from the marine macroalgae such as Laurencia hybrida, Agardhiella subulate, Ecklonia stolonifera, Eisenia bicyclis, and Egregia menziesii, are biosynthesized through a lipoxygenase (LOX)-mediated oxidative pathway involving polyunsaturated fatty acids (PUFAs). This enzymatic process generates hydroperoxide intermediates, which subsequently undergo regio- and stereospecific transformations to yield structurally diverse oxygenated metabolites, including plasmodiophorols and ectocarpins. These compounds are characterized by a conserved vinylcyclopentyl moiety, a structural hallmark critical to elucidating the mechanistic underpinnings of oxylipin biosynthesis in marine algae. The elucidation of these biosynthetic pathways enhances understanding of oxylipin enzymatic regulation and chemical diversity, while underscoring their ecological roles as signaling or defense molecules in marine ecosystems. Their unique structures and bioactivities offer potential for pharmacological and biotechnological applications, including novel bioactive agents. Investigating their production, structural complexity, and functionality is crucial for advancing marine natural product chemistry and exploring their ecological and industrial significance.</p>","PeriodicalId":93898,"journal":{"name":"Biochimie","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-07-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144610601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
相关产品
×
本文献相关产品
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信