Wenjing Zhang, Ramnath Bhagavath, N. Madras, J. Heffernan
{"title":"Examining HIV progression mechanisms via mathematical approaches","authors":"Wenjing Zhang, Ramnath Bhagavath, N. Madras, J. Heffernan","doi":"10.5206/mase/10774","DOIUrl":"https://doi.org/10.5206/mase/10774","url":null,"abstract":"\u0000 \u0000 \u0000The progression of HIV infection to AIDS is unclear and under examined. Many mechanisms have been proposed, including a decline in immune response, increase in replication rate, involution of the thymus, syncytium inducing capacity, activation of the latently infected cell pool, chronic activation of the immune system, and the ability of the virus to infect other immune system cells. The significance of each mechanism in combination has not been studied. We develop a simple HIV viral dynamics model incorporating proposed mechanisms as parameters that are allowed to vary. In the entire parameter space, we derive two formulae for the basic reproduction number (R0) by considering the infection starting with a single infected CD4 T cell and a single virion, respectively. We show that both formulae are equivalent. We derive analytical conditions for the occurrence of backward and forward bifurcations. To investigate the influence of the proposed mechanisms to the HIV progression, we perform uncertainty and sensitivity analysis for all parameters and conduct a bifurcation analysis on all parameters that are shown to be significant, in combination, to explore various HIV/AIDS progression dynamics. \u0000 \u0000 \u0000","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43109779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A solution to a fractional order semilinear equation using variational method","authors":"R. Karki","doi":"10.5206/mase/9413","DOIUrl":"https://doi.org/10.5206/mase/9413","url":null,"abstract":"We will discuss how we obtain a solution to a semilinear pseudo-differential equation involving fractional power of laplacian by using a method analogous to the direct method of calculus of variations. More precisely, we will discuss the existence of a minimizer of a suitable energy type functional whose Euler-Lagrange equation is the given semilinear pseudo-differential equation, and also discuss the regularity of such a minimizer so that it will be a solution to the semilinear equation.","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41394478","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A family of quasi-variable meshes high-resolution compact operator scheme for Burger's-Huxley, and Burger's-Fisher equation","authors":"Navnit Jha, Madhav Wagley","doi":"10.5206/mase/10837","DOIUrl":"https://doi.org/10.5206/mase/10837","url":null,"abstract":"We describe a quasi-variable meshes implicit compact finite-difference discretization having an accuracy of order four in the spatial direction and second-order in the temporal direction for obtaining numerical solution values of generalized Burger’s-Huxley and Burger’s-Fisher equations. The new difference scheme is derived for a general one-dimension quasi-linear parabolic partial differential equation on a quasi-variable meshes network to the extent that the magnitude of local truncation error of the high-order compact scheme remains unchanged in case of uniform meshes network. Practically, quasi-variable meshes high-order compact schemes yield more precise solution compared with uniform meshes high-order schemes of the same magnitude. A detailed exposition of the new scheme has been introduced and discussed the Fourier analysis based stability theory. The computational results with generalized Burger’s-Huxley equation and Burger’s-Fisher equation are obtained using quasi-variable meshes high-order compact scheme and compared with a numerical solution using uniform meshes high-order schemes to demonstrate capability and accuracy.","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45366410","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Non-local multiscale approaches for tumour-oncolytic viruses interactions","authors":"Abdulhamed Alsisi, R. Eftimie, D. Trucu","doi":"10.5206/MASE/10773","DOIUrl":"https://doi.org/10.5206/MASE/10773","url":null,"abstract":"Oncolytic virus (OV) therapy is a promising treatment for cancer due to the OVs selective ability to infect and replicate inside cancer cells, thus killing them, without harming healthy cells. In this work, we present a new non-local multiscale moving boundary model for the spatio-temporal cancer-OV interactions. This model explores an important double feedback loop that links the macro-scale dynamics of cancer-virus interactions and the micro-scale dynamics of proteolytic activity taking place at the tumour interface. The cancer cell-cell and cell-matrix interactions are assumed to be nonlocal, while the cell-virus interactions are assumed local. With the help of this model we investigate computationally various cancer treatment scenarios involving oncolytic viruses (i.e., the effect of injecting the OV inside the tumour, or outside it). Moreover, we investigate the effect of different cell-cell and cell-matrix interaction strengths on the success of OV spreading throughout the tumour, and the effect of constant or density-dependent virus diffusion coefficients on viral spread.","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43720291","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Dynamical analysis of a fractional order model incorporating fear in the disease transmission rate of COVID-19","authors":"D. Mukherjee, C. Maji","doi":"10.5206/mase/10745","DOIUrl":"https://doi.org/10.5206/mase/10745","url":null,"abstract":"This paper deals with a fractional-order three-dimensional compartmental model with fear effect. We have investigated whether fear can play an important role or not to spread and control the infectious diseases like COVID-19, SARS etc. in a bounded region. The basic results on uniqueness, non-negativity and boundedness of the solution of the system are investigated. Stability analysis ensures that the disease-free equilibrium point is locally asymptotically stable if carrying capacity greater than a certain threshold value.We have also derived the conditions for which endemic equilibrium is globally asymptotically stable that means the disease persists in the system. Numerical simulation suggests that the fear factor is an important role which is observed through Hopf-bifurcation.","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49441766","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"On mechanisms of trophic cascade caused by anti-predation response in food chain systems","authors":"Yang Wang, X. Zou","doi":"10.5206/mase/10739","DOIUrl":"https://doi.org/10.5206/mase/10739","url":null,"abstract":"Motivated by a recent field study [Nat. Commun. 7(2016), 10698] on the impact of fear of large carnivores on the populations in a cascading ecosystem of food chain type with the large carnivores as the top predator, in this paper we propose two model systems in the form of ordinary differential equations to mechanistically explore the cascade of such a fear effect. The models are of the Lotka-Volterra type, one is three imensional and the other four dimensional. The 3-D model only considers the cost of the anti-predation response reflected in the decrease of the production, while the 4-D model considers also the benefit of the response in reducing the predation rate, in addition to the cost by reducing the production. We perform a thorough analysis on the dynamics of the two models. The results reveal that the 3-D model and 4-model demonstrate opposite patterns for trophic cascade in terms of the dependence of population sizes for each species at the co-existence equilibrium on the anti-predation response level parameter, and such a difference is attributed to whether or not there is a benefit for the anti-predation response by the meso-carnivore species. \u0000 \u0000","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-06-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45658194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Selected Topics on Reaction-Diffusion-Advection Models from Spatial Ecology","authors":"King-Yeung Lam, Shuang Liu, Y. Lou","doi":"10.5206/mase/10644","DOIUrl":"https://doi.org/10.5206/mase/10644","url":null,"abstract":"We discuss the effects of movement and spatial heterogeneity on population dynamics via reaction–diffusion-advection models, focusing on the persistence, competition, and evolution of organisms in spatially heterogeneous environments. Topics include Lokta-Volterra competition models, river models, evolution of biased movement, phytoplanktongrowth, and spatial spread of epidemic disease. Open problems and conjectures are presented.P arts of this survey are adopted from the materials in [89,108,109], and some very recent progress are also included.","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43441601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"A mathematical model for the role of macrophages in the persistence and elimination of oncolytic viruses","authors":"Nada Almuallem, R. Eftimie","doi":"10.5206/mase/8543","DOIUrl":"https://doi.org/10.5206/mase/8543","url":null,"abstract":"Replicating oncolytic viruses provide promising treatment strategies against cancer. However, the success of these viral therapies depends mainly on the complex interactions between the virus particles and the host immune cells. Among these immune cells, macrophages represent one of the first line of defence against viral infections. In this paper, we consider a mathematical model that describes the interactions between a commonly-used oncolytic virus, the Vesicular Stomatitis Virus (VSV), and two extreme types of macrophages: the pro-inflammatory M1 cells (which seem to resist infection with VSV) and the anti-inflammatory M2 cells (which can be infected with VSV). We first show the existence of bounded solutions for this differential equations model. Then we investigate the long-term behaviour of the model by focusing on steady states and limit cycles, and study changes in this long-term dynamics as we vary different model parameters. Moreover, through sensitivity analysis we show that the parameters that have the highest impact on the level of virus particles in the system are the viral burst size (from infected macrophages), the virus infection rate, the M1$to$M2 polarisation rate, and the M1-induced anti-viral immunity. ","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42219865","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Modeling the impact of host resistance on structured tick population dynamics","authors":"Mahnaz Alavinejad, J. Sadiku, Jianhong Wu","doi":"10.5206/mase/10508","DOIUrl":"https://doi.org/10.5206/mase/10508","url":null,"abstract":"For a variety of tick species, the resistance, behavioural and immunological response of hosts has been reported in the biological literature but its impact on tick population dynamics has not been mathematically formulated and analyzed using dynamical models reflecting the full biological stages of ticks. Here we develop and simulate a delay differential equation model, with a particular focus on resistance resulting in grooming behaviour. We calculate the basic reproduction number using the spectral analysis of delay differential equations with positive feedback, and establish the existence and uniqueness of a positive equilibrium when the basic reproduction number exceeds unit. We also conduct numerical and sensitivity analysis about the dependence of this positive equilibrium on the the parameter relevant to grooming behaviour. We numerically obtain the relationship between grooming behaviour and equilibrium value at different stages.","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-03-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47181988","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
M. Al-arydah, S. Greenhalgh, J. Munganga, Robert J. Smith
{"title":"Applying the chemical-reaction definition of mass action to infectious disease modelling","authors":"M. Al-arydah, S. Greenhalgh, J. Munganga, Robert J. Smith","doi":"10.5206/mase/9372","DOIUrl":"https://doi.org/10.5206/mase/9372","url":null,"abstract":"The law of mass action is used to govern interactions between susceptible and infected individuals in a variety of infectious disease models. However, the commonly used version is a simplification of the version originally used to describe chemical reactions. We reformulate a general disease model using the chemical-reaction definition of mass action incorporating both an altered transmission term and an altered recovery term in the form of positive exponents. We examine the long-term outcome as these exponents vary. For many scenarios, the reproduction number is either 0 or $infty$, while it obtains finite values only for certain combinations. We found conditions under which endemic equilibria exist and are unique for a variety of possible exponents. We also determined circumstances under which backward bifurcations are possible or do not occur. The simplified form of mass action may be masking generalised behaviour that may result in practice if these exponents ``fluctuate'' around 1. This may lead to a loss of predictability in some models.","PeriodicalId":93797,"journal":{"name":"Mathematics in applied sciences and engineering","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2020-03-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44296914","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}