BMC Medical Imaging最新文献

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Investigating resting-state functional connectivity changes within procedural memory network across neuropsychiatric disorders using fMRI.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-13 DOI: 10.1186/s12880-024-01527-7
Mahdi Mohammadkhanloo, Mohammad Pooyan, Hamid Sharini, Mitra Yousefpour
{"title":"Investigating resting-state functional connectivity changes within procedural memory network across neuropsychiatric disorders using fMRI.","authors":"Mahdi Mohammadkhanloo, Mohammad Pooyan, Hamid Sharini, Mitra Yousefpour","doi":"10.1186/s12880-024-01527-7","DOIUrl":"10.1186/s12880-024-01527-7","url":null,"abstract":"<p><strong>Background: </strong>Cognitive networks impairments are common in neuropsychiatric disorders like Attention Deficit Hyperactivity Disorder (ADHD), bipolar disorder (BD), and schizophrenia (SZ). While previous research has focused on specific brain regions, the role of the procedural memory as a type of long-term memory to examine cognitive networks impairments in these disorders remains unclear. This study investigates alterations in resting-state functional connectivity (rs-FC) within the procedural memory network to explore brain function associated with cognitive networks in patients with these disorders.</p><p><strong>Methods: </strong>This study analyzed resting-state functional magnetic resonance imaging (rs-fMRI) data from 40 individuals with ADHD, 49 with BD, 50 with SZ, and 50 healthy controls (HCs). A procedural memory network was defined based on the selection of 34 regions of interest (ROIs) associated with the network in the Harvard-Oxford Cortical Structural Atlas (default atlas). Multivariate region of interest to region of interest connectivity (mRRC) was used to analyze the rs-FC between the defined network regions. Significant differences in rs-FC between patients and HCs were identified (P < 0.001).</p><p><strong>Results: </strong>ADHD patients showed increased Cereb45 l - Cereb3 r rs-FC (p = 0.000067) and decreased Cereb1 l - Cereb6 l rs-FC (p = 0.00092). BD patients exhibited increased rs-FC between multiple regions, including Claustrum r - Caudate r (p = 0.00058), subthalamic nucleus r - Pallidum l (p = 0.00060), substantia nigra l - Cereb2 l (p = 0.00082), Cereb10 r - SMA r (p = 0.00086), and Cereb9 r - SMA l (p = 0.00093) as well as decreased rs-FC in subthalamic nucleus r - Cereb6 l (p = 0.00013) and Cereb9 r - Cereb9 l (p = 0.00033). SZ patients indicated increased Caudate r- putamen l rs-FC (p = 0.00057) and decreased rs-FC in subthalamic nucleus r - Cereb6 l (p = 0.000063), and Cereb1 r - subthalamic nucleus r (p = 0.00063).</p><p><strong>Conclusions: </strong>This study found significant alterations in rs-FC within the procedural memory network in patients with ADHD, BD, and SZ compared to HCs. These findings suggest that disrupted rs-FC within this network may related to cognitive networks impairments observed in these disorders.</p><p><strong>Clinical trial number: </strong>Not applicable.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"18"},"PeriodicalIF":2.9,"publicationDate":"2025-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142977505","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Optimizing hip MRI: enhancing image quality and elevating inter-observer consistency using deep learning-powered reconstruction.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-13 DOI: 10.1186/s12880-025-01554-y
Yimeng Kang, Wenjing Li, Qingqing Lv, Qiuying Tao, Jieping Sun, Jinghan Dang, Xiaoyu Niu, Zijun Liu, Shujian Li, Zanxia Zhang, Kaiyu Wang, Baohong Wen, Jingliang Cheng, Yong Zhang, Weijian Wang
{"title":"Optimizing hip MRI: enhancing image quality and elevating inter-observer consistency using deep learning-powered reconstruction.","authors":"Yimeng Kang, Wenjing Li, Qingqing Lv, Qiuying Tao, Jieping Sun, Jinghan Dang, Xiaoyu Niu, Zijun Liu, Shujian Li, Zanxia Zhang, Kaiyu Wang, Baohong Wen, Jingliang Cheng, Yong Zhang, Weijian Wang","doi":"10.1186/s12880-025-01554-y","DOIUrl":"10.1186/s12880-025-01554-y","url":null,"abstract":"<p><strong>Background: </strong>Conventional hip joint MRI scans necessitate lengthy scan durations, posing challenges for patient comfort and clinical efficiency. Previously, accelerated imaging techniques were constrained by a trade-off between noise and resolution. Leveraging deep learning-based reconstruction (DLR) holds the potential to mitigate scan time without compromising image quality.</p><p><strong>Methods: </strong>We enrolled a cohort of sixty patients who underwent DL-MRI, conventional MRI, and No-DL MRI examinations to evaluate image quality. Key metrics considered in the assessment included scan duration, overall image quality, quantitative assessments of Relative Signal-to-Noise Ratio (rSNR), Relative Contrast-to-Noise Ratio (rCNR), and diagnostic efficacy. Two experienced radiologists independently assessed image quality using a 5-point scale (5 indicating the highest quality). To gauge interobserver agreement for the assessed pathologies across image sets, we employed weighted kappa statistics. Additionally, the Wilcoxon signed rank test was employed to compare image quality and quantitative rSNR and rCNR measurements.</p><p><strong>Results: </strong>Scan time was significantly reduced with DL-MRI and represented an approximate 66.5% reduction. DL-MRI consistently exhibited superior image quality in both coronal T2WI and axial T2WI when compared to both conventional MRI (p < 0.01) and No-DL-MRI (p < 0.01). Interobserver agreement was robust, with kappa values exceeding 0.735. For rSNR data, coronal fat-saturated(FS) T2WI and axial FS T2WI in DL-MRI consistently outperformed No-DL-MRI, with statistical significance (p < 0.01) observed in all cases. Similarly, rCNR data revealed significant improvements (p < 0.01) in coronal FS T2WI of DL-MRI when compared to No-DL-MRI. Importantly, our findings indicated that DL-MRI demonstrated diagnostic performance comparable to conventional MRI.</p><p><strong>Conclusion: </strong>Integrating deep learning-based reconstruction methods into standard clinical workflows has the potential to the promise of accelerating image acquisition, enhancing image clarity, and increasing patient throughput, thereby optimizing diagnostic efficiency.</p><p><strong>Trial registration: </strong>Retrospectively registered.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"17"},"PeriodicalIF":2.9,"publicationDate":"2025-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142977506","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High-risk habitat radiomics model based on ultrasound images for predicting lateral neck lymph node metastasis in differentiated thyroid cancer.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-13 DOI: 10.1186/s12880-025-01551-1
Han Liu, Chun-Jie Hou, Min Wei, Ke-Feng Lu, Ying Liu, Pei Du, Li-Tao Sun, Jing-Lan Tang
{"title":"High-risk habitat radiomics model based on ultrasound images for predicting lateral neck lymph node metastasis in differentiated thyroid cancer.","authors":"Han Liu, Chun-Jie Hou, Min Wei, Ke-Feng Lu, Ying Liu, Pei Du, Li-Tao Sun, Jing-Lan Tang","doi":"10.1186/s12880-025-01551-1","DOIUrl":"https://doi.org/10.1186/s12880-025-01551-1","url":null,"abstract":"<p><strong>Background: </strong>This study aims to evaluate the predictive usefulness of a habitat radiomics model based on ultrasound images for anticipating lateral neck lymph node metastasis (LLNM) in differentiated thyroid cancer (DTC), and for pinpointing high-risk habitat regions and significant radiomics traits.</p><p><strong>Methods: </strong>A group of 214 patients diagnosed with differentiated thyroid carcinoma (DTC) between August 2021 and August 2023 were included, consisting of 107 patients with confirmed postoperative lateral lymph node metastasis (LLNM) and 107 patients without metastasis or lateral cervical lymph node involvement. An additional cohort of 43 patients was recruited to serve as an independent external testing group for this study. Patients were randomly divided into training and internal testing group at an 8:2 ratio. Region of interest (ROI) was manually outlined, and habitat analysis subregions were defined using the K-means method. The ideal number of subregions (n = 5) was determined using the Calinski-Harabasz score, leading to the creation of a habitat radiomics model with 5 subregions and the identification of the high-risk habitat model. Area under the curve (AUC) values were calculated for all models to assess their validity, and predictive model nomograms were created by integrating clinical features. The internal and external testing dataset is employed to assess the predictive performance and stability of the model.</p><p><strong>Results: </strong>In internal testing group, Habitat 3 was identified as the high-risk habitat model in the study, showing the best diagnostic efficacy among all models (AUC(CRM) vs. AUC(Habitat 3) vs. AUC(CRM + Habitat 3) = 0.84(95%CI:0.71-0.97) vs. 0.90(95%CI:0.80-1.00) vs. 0.79(95%CI:0.65-0.93)). Moreover, integrating the Habitat 3 model with clinical features and constructing nomograms enhanced the predictive capability of the combined model (AUC = 0.95(95%CI:0.88-1.00)). In this study, an independent external testing cohort was utilized to assess the model's accuracy, yielding an AUC of 0.88 (95%CI: 0.78-0.98).</p><p><strong>Conclusion: </strong>The integration of the High-Risk Habitats (Habitat 3) radiomics model with clinical characteristics demonstrated a high predictive accuracy in identifying LLNM. This model has the potential to offer valuable guidance to surgeons in deciding the necessity of LLNM dissection for DTC.</p><p><strong>Clinical trial number: </strong>Not applicable.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"16"},"PeriodicalIF":2.9,"publicationDate":"2025-01-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142977504","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of diagnostic performance for pulmonary nodule detection between free-breathing spiral ultrashort echo time and free-breathing radial volumetric interpolated breath-hold examination.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-10 DOI: 10.1186/s12880-024-01536-6
Yehai Jiang, Doudou Pu, Xuyang Zhang, Zhanli Ren, Nan Yu
{"title":"Comparison of diagnostic performance for pulmonary nodule detection between free-breathing spiral ultrashort echo time and free-breathing radial volumetric interpolated breath-hold examination.","authors":"Yehai Jiang, Doudou Pu, Xuyang Zhang, Zhanli Ren, Nan Yu","doi":"10.1186/s12880-024-01536-6","DOIUrl":"10.1186/s12880-024-01536-6","url":null,"abstract":"<p><strong>Objective: </strong>This study aims to evaluate the efficacy of two free-breathing magnetic resonance imaging (MRI) sequences-spiral ultrashort echo time (spiral UTE) and radial volumetric interpolated breath-hold examination (radial VIBE).</p><p><strong>Methods: </strong>Patients were prospectively enrolled between February 2021 and September 2022. All participants underwent both 3T MRI scanning, utilizing the radial VIBE sequence and spiral UTE sequence, as well as standard chest CT imaging. The CT and MRI examinations were conducted within a 7-day interval. Two radiologists assessed the image quality using a visual 5-point ordinal Likert scale, and pulmonary nodules identified on MRI were evaluated through comparison with CT as the reference standard.</p><p><strong>Results: </strong>A total of 52 patients participated in this study, during which 82 pulmonary nodules were detected via CT imaging. The image quality scores for depicting pulmonary vasculature and airways using the spiral UTE sequence (4.61 ± 0.63; 4.76 ± 0.48) were significantly higher than those for the radial VIBE sequence (4.27 ± 0.87; 4.14 ± 0.82) (P < 0.05). However, for nodules smaller than 6 mm, the detection rate for the spiral UTE sequence (82.61%) was notably higher than that of the radial VIBE sequence (39.13%) (P < 0.05). Additionally, the detection rate for ground-glass nodules was higher with the spiral UTE sequence (75.00%) compared to the radial VIBE sequence (17.86%) (P < 0.05). The Pearson correlation coefficient (r) between radial VIBE and CT was 0.99 (P < 0.001), and the Pearson correlation coefficient (r) between spiral UTE and CT was also 0.99 (P < 0.001).</p><p><strong>Conclusion: </strong>The spiral UTE sequence demonstrates superior capability in visualizing ground glass nodules, blood vessels, and airways. In cases where patients present with ground glass nodules, the spiral UTE sequence is the preferred choice. Conversely, when the nodules are solid or partially solid, it is advisable to opt for radial VIBE sequences that are time-efficient and exhibit fewer artifacts.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"15"},"PeriodicalIF":2.9,"publicationDate":"2025-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11720306/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142963769","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Knowledge discovery from database: MRI radiomic features to assess recurrence risk in high-grade meningiomas.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-09 DOI: 10.1186/s12880-024-01483-2
Chen Chen, Lifang Hao, Bin Bai, Guijun Zhang
{"title":"Knowledge discovery from database: MRI radiomic features to assess recurrence risk in high-grade meningiomas.","authors":"Chen Chen, Lifang Hao, Bin Bai, Guijun Zhang","doi":"10.1186/s12880-024-01483-2","DOIUrl":"10.1186/s12880-024-01483-2","url":null,"abstract":"<p><strong>Purpose: </strong>We used knowledge discovery from radiomics of T2-weighted imaging (T2WI) and contrast-enhanced T1-weighted imaging (T1C) for assessing relapse risk in patients with high-grade meningiomas (HGMs).</p><p><strong>Methods: </strong>279 features were extracted from each ROI including 9 histogram features, 220 Gy-level co-occurrence matrix features, 20 Gy-level run-length matrix features, 5 auto-regressive model features, 20 wavelets transform features and 5 absolute gradient statistics features. The datasets were randomly divided into two groups, the training set (~ 70%) and the test set (~ 30%). Combinations of data preprocessing methods, including normalization (Min-Max, Z-score, Mean), dimensionality reduction (Pearson Correlation Coefficients (PCC)), feature selector (max-Number, cluster) and ten-fold cross-validation were analyzed for their prediction performance. Kaplan-Meier curve, Cox proportional hazards regression model were used and concordance index (C-index), integrated Brier score (IBS) were selected. Model performance was assessed using the C-index.</p><p><strong>Results: </strong>WHO grade, age, gender, histogram (Mean, Perc.90%, Perc.99%), Gray-level co-occurrence matrix (S(3, -3)DifVarnc, S(5, 5)Correlat, S(1, 0)SumEntrp, S(2, -2)InvDfMom), Teta1, WavEnLL_s-2 and GrVariance were identified as the significant recurrence factors. The pipeline using Mean_PCC_Cluster_10 of T1C yielded the highest efficiency with an IBS of 0.170, 0.188, 0.208 and C-index of 0.709, 0.705, 0.602 in the train, test and validation sets, respectively. The pipeline using MinMax_PCC_Cluster_19 of T2WI yielded the highest efficiency with an IBS of 0.189, 0.175, 0.185 and C-index of 0.783, 0.66, 0.649 in the train, test and validation sets. The pipeline using MinMax_PCC_Cluster_13 of T2WI + T1C yielded the highest efficiency with an IBS of 0.152, 0.164, 0.191 and C-index of 0.701, 0.656, 0.593 in the train, test and validation sets, respectively.</p><p><strong>Conclusion: </strong>Knowledge discovery from MRI radiomic features can slightly help predict recurrence risk in HGMs. T2WI or T1C yielded better efficiency than T2WI + T1C. The parameters with the best power were Mean, Perc.99%, WavEnLL_s-2, Teta1 and GrVariance.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"14"},"PeriodicalIF":2.9,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11716254/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944113","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effective BCDNet-based breast cancer classification model using hybrid deep learning with VGG16-based optimal feature extraction.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-08 DOI: 10.1186/s12880-024-01538-4
Meenakshi Devi P, Muna A, Yasser Ali, Sumanth V
{"title":"Effective BCDNet-based breast cancer classification model using hybrid deep learning with VGG16-based optimal feature extraction.","authors":"Meenakshi Devi P, Muna A, Yasser Ali, Sumanth V","doi":"10.1186/s12880-024-01538-4","DOIUrl":"10.1186/s12880-024-01538-4","url":null,"abstract":"<p><strong>Problem: </strong>Breast cancer is a leading cause of death among women, and early detection is crucial for improving survival rates. The manual breast cancer diagnosis utilizes more time and is subjective. Also, the previous CAD models mostly depend on manmade visual details that are complex to generalize across ultrasound images utilizing distinct techniques. Distinct imaging tools have been utilized in previous works such as mammography and MRI. However, these imaging tools are costly and less portable than ultrasound imaging. Also, ultrasound imaging is a non-invasive method commonly used for breast cancer screening. Hence, the paper presents a novel deep learning model, BCDNet, for classifying breast tumors as benign or malignant using ultrasound images.</p><p><strong>Aim: </strong>The primary aim of the study is to design an effective breast cancer diagnosis model that can accurately classify tumors in their early stages, thus reducing mortality rates. The model aims to optimize the weight and parameters using the RPAOSM-ESO algorithm to enhance accuracy and minimize false negative rates.</p><p><strong>Methods: </strong>The BCDNet model utilizes transfer learning from a pre-trained VGG16 network for feature extraction and employs an AHDNAM classification approach, which includes ASPP, DTCN, 1DCNN, and an attention mechanism. The RPAOSM-ESO algorithm is used to fine-tune the weights and parameters.</p><p><strong>Results: </strong>The RPAOSM-ESO-BCDNet-based breast cancer diagnosis model provided 94.5 accuracy rates. This value is relatively higher than the previous models such as DTCN (88.2), 1DCNN (89.6), MobileNet (91.3), and ASPP-DTC-1DCNN-AM (93.8). Hence, it is guaranteed that the designed RPAOSM-ESO-BCDNet produces relatively accurate solutions for the classification than the previous models.</p><p><strong>Conclusion: </strong>The BCDNet model, with its sophisticated feature extraction and classification techniques optimized by the RPAOSM-ESO algorithm, shows promise in accurately classifying breast tumors using ultrasound images. The study suggests that the model could be a valuable tool in the early detection of breast cancer, potentially saving lives and reducing the burden on healthcare systems.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"12"},"PeriodicalIF":2.9,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11707918/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ultrasound localization microscopy in the diagnosis of breast tumors and prediction of relevant histologic biomarkers associated with prognosis in humans: the protocol for a prospective, multicenter study.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-08 DOI: 10.1186/s12880-024-01535-7
Jia Li, Lei Chen, Ronghui Wang, Jiang Zhu, Ao Li, Jianchun Li, Zhaojun Li, Wen Luo, Wenkun Bai, Tao Ying, Cong Wei, Di Sun, Yuanyi Zheng
{"title":"Ultrasound localization microscopy in the diagnosis of breast tumors and prediction of relevant histologic biomarkers associated with prognosis in humans: the protocol for a prospective, multicenter study.","authors":"Jia Li, Lei Chen, Ronghui Wang, Jiang Zhu, Ao Li, Jianchun Li, Zhaojun Li, Wen Luo, Wenkun Bai, Tao Ying, Cong Wei, Di Sun, Yuanyi Zheng","doi":"10.1186/s12880-024-01535-7","DOIUrl":"10.1186/s12880-024-01535-7","url":null,"abstract":"<p><strong>Background: </strong>Benign and malignant breast tumors differ in their microvasculature morphology and distribution. Histologic biomarkers of malignant breast tumors are also correlated with the microvasculature. There is a lack of imaging technology for evaluating the microvasculature. Ultrasound localization microscopy (ULM) can provide detailed microvascular architecture at super-resolution. The objective of this trial is to explore the role of ULM in distinguishing benign from malignant breast tumors and to explore the correlations between ULM qualitative and quantitative parameters and histologic biomarkers in malignant breast tumors.</p><p><strong>Methods/design: </strong>This prospective and multicenter study will include 83 patients with breast tumors that will undergo ULM. 55 patients will be assigned to the malignant group, and 28 patients will be assigned to the benign group. The primary outcome is the differences in the qualitative parameters (microvasculature morphology, distribution, and flow direction) between benign and malignant breast tumors on ULM. Secondary outcomes include (1) differences in the quantitative parameters (microvasculature density, tortuosity, diameter, and flow velocity) between benign and malignant breast tumors based on ULM; (2) diagnostic performance of the qualitative parameters in distinguishing benign and malignant breast tumors; (3) diagnostic performance of the quantitative parameters in distinguishing benign and malignant breast tumors; (4) relationships between the qualitative parameters and histologic biomarkers in malignant breast tumors; (5) relationships between the quantitative parameters and histologic biomarkers in malignant breast tumors; and (6) the evaluation of inter-reader and intra-reader reproducibility.</p><p><strong>Discussion: </strong>Detecting vascularity in breast tumors is of great significance to differentiate benign from malignant tumors and to predict histologic biomarkers. These histologic biomarkers, such as ER, PR, HER2 and Ki67, are closely related to prognosis evaluation. This trial will provide maximum information about the microvasculature of breast tumors and thereby will help with the formulation of subsequent differential diagnosis and the prediction of histologic biomarkers.</p><p><strong>Trial registration number/date: </strong>Chinese Clinical Trial Registry ChiCTR2100048361/6th/July/2021. This study is a part of that clinical trial.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"13"},"PeriodicalIF":2.9,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11715691/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944072","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Consistency analysis of two US techniques for evaluating hepatic steatosis in patients with metabolic dysfunction-associated steatotic liver disease.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-07 DOI: 10.1186/s12880-024-01549-1
Fei Chen, Jingjing An, Long Deng, Jing Wang, Ruiling He
{"title":"Consistency analysis of two US techniques for evaluating hepatic steatosis in patients with metabolic dysfunction-associated steatotic liver disease.","authors":"Fei Chen, Jingjing An, Long Deng, Jing Wang, Ruiling He","doi":"10.1186/s12880-024-01549-1","DOIUrl":"https://doi.org/10.1186/s12880-024-01549-1","url":null,"abstract":"<p><strong>Background: </strong>US tools to quantify hepatic steatosis have recently been made clinically available by different manufacturers, but comparative data on their consistency are lacking.</p><p><strong>Objective: </strong>US tools to quantify hepatic steatosis have recently been made clinically available by different manufacturers, but comparative data on their consistency are lacking. The aim of our study was to compare the diagnostic consistency for evaluating hepatic steatosis by two different US techniques, hepatorenal index by B-mode Ratio and attenuation coefficient by attenuation imaging (ATI).</p><p><strong>Methods: </strong>Patients with suspicion or previously diagnosed of metabolic dysfunction-associated steatotic liver disease (MASLD) who attended fatty liver consulting room from June 2023 to September 2023 were prospectively recruited. Patients underwent two different US techniques of B-mode Ratio and ATI, and laboratory test were collected. According to previously proposed cut-off values, B-mode Ratio ≥ 1.22, 1.42, 1.54, and ATI ≥ 0.62, 0.70, and 0.78 dB/cm/MH were used for assessing of mild, moderate, and severe hepatic steatosis, respectively. Kappa consistency test was used to evaluate the consistency of hepatic steatosis.</p><p><strong>Results: </strong>A total of 62 patients were enrolled, including 44 males (71.0%) with an age of (41 ± 13) years and a body mass index of (27.0 ± 3.5) kg/m<sup>2</sup>. In the hyperlipidemia group, the B-mode Ratio and ATI were significantly higher than those in the non-hyperlipidemia group, with values of 1.68 ± 0.39 vs. 1.28 ± 0.35 (p = 0.001) and 0.74 ± 0.12 dB/cm/MH vs. 0.64 ± 0.11 dB/cm/MH (p = 0.005), respectively. The correlation coefficient between B-mode Ratio and ATI was 0.732 (p < 0.001). Using B-mode Ratio and ATI as diagnostic criteria for MASLD, the proportion of patients with MASLD was 79% and 82%, respectively. The Kappa coefficient for assessing MASLD was 0.90 (p < 0.001). Furthermore, these two different US techniques were used for grading hepatic steatosis, with no, mild, moderate, and severe steatosis accounting for 21%, 18%, 13%, and 48%, as well as 18%, 29%, 22%, and 31%, respectively. The linear weighted Kappa coefficient for staging hepatic steatosis was 0.78 (95% confidence interval: 0.68-0.87, p < 0.001).</p><p><strong>Conclusion: </strong>The non-invasive methods of two different US techniques based on B-mode Ratio and ATI have good consistency for evaluating hepatic steatosis, and can be used for large-scale community screening.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"10"},"PeriodicalIF":2.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11708176/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
HistoNeXt: dual-mechanism feature pyramid network for cell nuclear segmentation and classification.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-07 DOI: 10.1186/s12880-025-01550-2
Junxiao Chen, Ruixue Wang, Wei Dong, Hua He, Shiyong Wang
{"title":"HistoNeXt: dual-mechanism feature pyramid network for cell nuclear segmentation and classification.","authors":"Junxiao Chen, Ruixue Wang, Wei Dong, Hua He, Shiyong Wang","doi":"10.1186/s12880-025-01550-2","DOIUrl":"https://doi.org/10.1186/s12880-025-01550-2","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Purpose: &lt;/strong&gt;To develop an end-to-end convolutional neural network model for analyzing hematoxylin and eosin(H&E)-stained histological images, enhancing the performance and efficiency of nuclear segmentation and classification within the digital pathology workflow.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Methods: &lt;/strong&gt;We propose a dual-mechanism feature pyramid fusion technique that integrates nuclear segmentation and classification tasks to construct the HistoNeXt network model. HistoNeXt utilizes an encoder-decoder architecture, where the encoder, based on the advanced ConvNeXt convolutional framework, efficiently and accurately extracts multi-level abstract features from tissue images. These features are subsequently shared with the decoder. The decoder employs a dual-mechanism architecture: The first branch of the mechanism splits into two parallel paths for nuclear segmentation, producing nuclear pixel (NP) and horizontal and vertical distance (HV) predictions, while the second mechanism branch focuses on type prediction (TP). The NP and HV branches leverage densely connected blocks to facilitate layer-by-layer feature transmission and reuse, while the TP branch employs channel attention to adaptively focus on critical features. Comprehensive data augmentation including morphology-preserving geometric transformations and adaptive H&E channel adjustments was applied. To address class imbalance, type-aware sampling was applied. The model was evaluated on public tissue image datasets including CONSEP, PanNuke, CPM17, and KUMAR. The performance in nuclear segmentation was evaluated using the Dice Similarity Coefficient (DICE), the Aggregated Jaccard Index (AJI) and Panoptic Quality (PQ), and the classification performance was evaluated using F1 scores and category-specific F1 scores. In addition, computational complexity, measured in Giga Floating Point Operations Per Second (GFLOPS), was used as an indicator of resource consumption.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;HistoNeXt demonstrated competitive performance across multiple datasets: achieving a DICE score of 0.874, an AJI of 0.722, and a PQ of 0.689 on the CPM17 dataset; a DICE score of 0.826, an AJI of 0.625, and a PQ of 0.565 on KUMAR; and performance comparable to Transformer-based models, such as CellViT-SAM-H, on PanNuke, with a binary PQ of 0.6794, a multi-class PQ of 0.4940, and an overall F1 score of 0.82. On the CONSEP dataset, it achieved a DICE score of 0.843, an AJI of 0.592, a PQ of 0.532, and an overall classification F1 score of 0.773. Specific F1 scores for various cell types were as follows: 0.653 for malignant or dysplastic epithelial cells, 0.516 for normal epithelial cells, 0.659 for inflammatory cells, and 0.587 for spindle cells. The tiny model's complexity was 33.7 GFLOPS.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusion: &lt;/strong&gt;By integrating novel convolutional technology and employing a pyramid fusion of dual-mechanism characteristics, HistoNeXt enhances both the precision and efficiency of nu","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"9"},"PeriodicalIF":2.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11706021/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944109","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Liver fibrosis stage classification in stacked microvascular images based on deep learning.
IF 2.9 3区 医学
BMC Medical Imaging Pub Date : 2025-01-07 DOI: 10.1186/s12880-024-01531-x
Daisuke Miura, Hiromi Suenaga, Rino Hiwatashi, Shingo Mabu
{"title":"Liver fibrosis stage classification in stacked microvascular images based on deep learning.","authors":"Daisuke Miura, Hiromi Suenaga, Rino Hiwatashi, Shingo Mabu","doi":"10.1186/s12880-024-01531-x","DOIUrl":"https://doi.org/10.1186/s12880-024-01531-x","url":null,"abstract":"<p><strong>Background: </strong>Monitoring fibrosis in patients with chronic liver disease (CLD) is an important management strategy. We have already reported a novel stacked microvascular imaging (SMVI) technique and an examiner scoring evaluation method to improve fibrosis assessment accuracy and demonstrate its high sensitivity. In the present study, we analyzed the effectiveness and objectivity of SMVI in diagnosing the liver fibrosis stage based on artificial intelligence (AI).</p><p><strong>Methods: </strong>This single-center, cross-sectional study included 517 patients with CLD who underwent ultrasonography and liver stiffness testing between August 2019 and October 2022. A convolutional neural network model was constructed to evaluate the degree of liver fibrosis from stacked microvascular images generated by accumulating high-sensitivity Doppler (i.e., high-definition color) images from these patients. In contrast, as a method of judgment by the human eye, we focused on three hallmarks of intrahepatic microvessel morphological changes in the stacked microvascular images: narrowing, caliber irregularity, and tortuosity. The degree of liver fibrosis was classified into five stages according to etiology based on liver stiffness measurement: F0-1Low (< 5.0 kPa), F0-1High (≥ 5.0 kPa), F2, F3, and F4.</p><p><strong>Results: </strong>The AI classification accuracy was 53.8% for a 5-class classification, 66.3% for a 3-class classification (F0-1Low vs. F0-1High vs. F2-4), and 83.8% for a 2-class classification (F0-1 vs. F2-4). The diagnostic accuracy for ≥ F2 was 81.6% in the examiner's score assessment, compared with 83.8% in AI assessment, indicating that AI achieved higher diagnostic accuracy. Similarly, AI demonstrated higher sensitivity and specificity of 84.2% and 83.5%, respectively. Comparing human judgement with AI judgement, the AI analysis was a superior model with a higher F1 score in the 2-class classification.</p><p><strong>Conclusions: </strong>In detecting significant fibrosis (≥ F2) using the SMVI method, AI-based assessments are more accurate than human judgement; moreover, AI-based SMVI analysis eliminating human subjectivity bias and determining patients with objective fibrosis development is considered an important improvement.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"25 1","pages":"8"},"PeriodicalIF":2.9,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11706143/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142944116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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